RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 SHC3Q92529 594 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 JAKMIP2Q96AA8 810 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 IGSF21Q96ID5 467 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 SENP8Q96LD8 212 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 COLEC11Q9BWP8 271 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 VN1R3Q9BXE9 311 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 PBX4Q9BYU1 374 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 CYP3A43Q9HB55 503 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 UBE2TQ9NPD8 197 aaPredicted RBP10.26□□□□□ -0.77
MCF2L-227ENST00000486806 DNAJC12Q9UKB3 198 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 CAPN11Q9UMQ6 739 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 CNTN6Q9UQ52 1028 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 FAN1Q9Y2M0 1017 aa10.26□□□□□ -0.77
MCF2L-227ENST00000486806 YBX2Q9Y2T7 364 aaKnown RBP10.26□□□□□ -0.77
MCF2L-227ENST00000486806 TDRD15B5MCY1 1934 aaKnown RBP10.26□□□□□ -0.77
MCF2L-227ENST00000486806 SF3B1O75533 1304 aaKnown RBP eCLIP10.26□□□□□ -0.77
MCF2L-227ENST00000486806 TRIP11Q15643 1979 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.25□□□□□ -0.77
MCF2L-227ENST00000486806 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.25□□□□□ -0.77
MCF2L-227ENST00000486806 NT5C1B-RDH14C9J2C7 533 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 C5orf67F2Z3F1 127 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 I3L4J1 428 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 CYB561D2O14569 222 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 GABRDO14764 452 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 MFAP3LO75121 409 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 CLSTN1O94985 981 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 CA3P07451 260 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 FAM163BP0C2L3 166 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 ODC1P11926 461 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 TYMPP19971 482 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 CASP14P31944 242 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 PPM1AP35813 382 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 PBX2P40425 430 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 RAP1GAPP47736 663 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 ZNF132P52740 706 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 MFAP3P55082 362 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 DRAP1Q14919 205 aaPredicted RBP10.25□□□□□ -0.77
MCF2L-227ENST00000486806 SPRED2Q7Z698 418 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 ADGRF2Q8IZF7 708 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 APPL2Q8NEU8 664 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 STK33Q9BYT3 514 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 GPR62Q9BZJ7 368 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 NLRC4Q9NPP4 1024 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 AAASQ9NRG9 546 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 CISHQ9NSE2 258 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 IMPACTQ9P2X3 320 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 MYO6Q9UM54 1294 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 PCDHB8Q9UN66 801 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 RWDD3Q9Y3V2 267 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 NME7Q9Y5B8 376 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 TSC2P49815 1807 aa10.25□□□□□ -0.77
MCF2L-227ENST00000486806 LAMA2P24043 3122 aaKnown RBP10.24□□□□□ -0.77
MCF2L-227ENST00000486806 KIAA1671Q9BY89 1806 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 A0A1W2PPC1 479 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 ARHGEF37A1IGU5 675 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 LRRC53A6NM62 1247 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 SYN3O14994 580 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 TRAPPC3O43617 180 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 HUS1O60921 280 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 CILPO75339 1184 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 TADA2AO75478 443 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 WEE2P0C1S8 567 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 PNMA6AP0CW24 399 aaPredicted RBP10.24□□□□□ -0.77
MCF2L-227ENST00000486806 FGFR3P22607 806 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 WARSP23381 471 aaKnown RBP10.24□□□□□ -0.77
MCF2L-227ENST00000486806 CDH8P55286 799 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 ZBED6P86452 979 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 PLCB3Q01970 1234 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 TAP1Q03518 808 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 ELAVL2Q12926 359 aaKnown RBP10.24□□□□□ -0.77
MCF2L-227ENST00000486806 RAPGEF1Q13905 1077 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 RAB30Q15771 203 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 ARHGAP44Q17R89 818 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 SPOUT1Q5T280 376 aaKnown RBP10.24□□□□□ -0.77
MCF2L-227ENST00000486806 WSCD1Q658N2 575 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 E4F1Q66K89 784 aaPredicted RBP10.24□□□□□ -0.77
MCF2L-227ENST00000486806 PDXDC1Q6P996 788 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 DSTYKQ6XUX3 929 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.24□□□□□ -0.77
MCF2L-227ENST00000486806 OSTM1Q86WC4 334 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 FAM71AQ8IYT1 594 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 TMEM86AQ8N2M4 240 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 WHAMMQ8TF30 809 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 TWNKQ96RR1 684 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 MMS19Q96T76 1030 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 DNAJC7Q99615 494 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 RTP3Q9BQQ7 232 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 MRPL45Q9BRJ2 306 aaKnown RBP10.24□□□□□ -0.77
MCF2L-227ENST00000486806 C17orf80Q9BSJ5 609 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 HERC2P3Q9BVR0 1158 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 PLVAPQ9BX97 442 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 SPG21Q9NZD8 308 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 HMGXB4Q9UGU5 601 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 DSEQ9UL01 958 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 PCDHB12Q9Y5F1 795 aa10.24□□□□□ -0.77
MCF2L-227ENST00000486806 SCN1AP35498 2009 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 FOXN3O00409 490 aaPredicted RBP10.23□□□□□ -0.77
MCF2L-227ENST00000486806 HCRTO43612 131 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 FGF18O76093 207 aa10.23□□□□□ -0.77
MCF2L-227ENST00000486806 SOD2P04179 222 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms