RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 MBOAT7Q96N66 472 aa11.24□□□□□ -0.61
CCDC171-208ENST00000486641 IWS1Q96ST2 819 aa11.24□□□□□ -0.61
CCDC171-208ENST00000486641 TSSK1BQ9BXA7 367 aa11.24□□□□□ -0.61
CCDC171-208ENST00000486641 MTMR4Q9NYA4 1195 aa11.24□□□□□ -0.61
CCDC171-208ENST00000486641 PPM1HQ9ULR3 514 aa11.24□□□□□ -0.61
CCDC171-208ENST00000486641 RABGAP1Q9Y3P9 1069 aa11.24□□□□□ -0.61
CCDC171-208ENST00000486641 SPATA31A5Q5VU36 1347 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 SPATA31A6Q5VVP1 1343 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 SPATA31A7Q8IWB4 1347 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 FCHO1O14526 889 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 ZNF862O60290 1169 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 DLDP09622 509 aaKnown RBP11.23□□□□□ -0.61
CCDC171-208ENST00000486641 CRKLP46109 303 aaKnown RBP11.23□□□□□ -0.61
CCDC171-208ENST00000486641 PPP3CAQ08209 521 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 KLF1Q13351 362 aaPredicted RBP11.23□□□□□ -0.61
CCDC171-208ENST00000486641 HNRNPDQ14103 355 aaKnown RBP11.23□□□□□ -0.61
CCDC171-208ENST00000486641 DDB1Q16531 1140 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 CCNG2Q16589 344 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 ACAD11Q709F0 780 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 GSTA5Q7RTV2 222 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 TMPRSS6Q8IU80 811 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 LARGE2Q8N3Y3 721 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 GLIS1Q8NBF1 620 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 OXNAD1Q96HP4 312 aaPredicted RBP11.23□□□□□ -0.61
CCDC171-208ENST00000486641 DNAJC1Q96KC8 554 aaKnown RBP11.23□□□□□ -0.61
CCDC171-208ENST00000486641 AGBL1Q96MI9 1066 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 ANO3Q9BYT9 981 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 ANAPC7Q9UJX3 599 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 H3BRJ5 948 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 GOLGA8RI6L899 631 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 ZBTB39O15060 712 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 PIAS1O75925 651 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 ZSCAN5DPP0CG00 497 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 DESP17661 470 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 MAPK4P31152 587 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 MAGEA10P43363 369 aaPredicted RBP11.23□□□□□ -0.61
CCDC171-208ENST00000486641 SH3BGRP55822 239 aaPredicted RBP11.23□□□□□ -0.61
CCDC171-208ENST00000486641 ACTR3P61158 418 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 NOP14P78316 857 aaKnown RBP11.23□□□□□ -0.61
CCDC171-208ENST00000486641 ZNF543Q08ER8 600 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 TMEM62Q0P6H9 643 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 RASA3Q14644 834 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 R3HDM1Q15032 1099 aaKnown RBP11.23□□□□□ -0.61
CCDC171-208ENST00000486641 RASA2Q15283 850 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 CCDC142Q17RM4 750 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 OLFML2BQ68BL8 750 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 ZNF720Q7Z2F6 126 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 FAM71AQ8IYT1 594 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 RBM15BQ8NDT2 890 aaKnown RBP11.23□□□□□ -0.61
CCDC171-208ENST00000486641 DDX27Q96GQ7 796 aaKnown RBP11.23□□□□□ -0.61
CCDC171-208ENST00000486641 FIZ1Q96SL8 496 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 KLF6Q99612 283 aaPredicted RBP11.23□□□□□ -0.61
CCDC171-208ENST00000486641 FOXP3Q9BZS1 431 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 NMUR2Q9GZQ4 415 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 VPS11Q9H270 941 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 PICK1Q9NRD5 415 aa11.23□□□□□ -0.61
CCDC171-208ENST00000486641 PSMC3IPQ9P2W1 217 aaPredicted RBP11.23□□□□□ -0.61
CCDC171-208ENST00000486641 ZBTB5O15062 677 aa11.22□□□□□ -0.61
CCDC171-208ENST00000486641 ENO1P06733 434 aaKnown RBP11.22□□□□□ -0.61
CCDC171-208ENST00000486641 CCDC166P0CW27 439 aa11.22□□□□□ -0.61
CCDC171-208ENST00000486641 FDX1P10109 184 aa11.22□□□□□ -0.61
CCDC171-208ENST00000486641 MYL2P10916 166 aa11.22□□□□□ -0.61
CCDC171-208ENST00000486641 BMP3P12645 472 aa11.22□□□□□ -0.61
CCDC171-208ENST00000486641 GCLMP48507 274 aa11.22□□□□□ -0.61
CCDC171-208ENST00000486641 RPS8P62241 208 aaKnown RBP11.22□□□□□ -0.61
CCDC171-208ENST00000486641 PDIA2Q13087 525 aaKnown RBP11.22□□□□□ -0.61
CCDC171-208ENST00000486641 GRM2Q14416 872 aa11.22□□□□□ -0.61
CCDC171-208ENST00000486641 DLGAP5Q15398 846 aa11.22□□□□□ -0.61
CCDC171-208ENST00000486641 LRRC36Q1X8D7 754 aa11.22□□□□□ -0.61
CCDC171-208ENST00000486641 ALYREFQ86V81 257 aaKnown RBP11.22□□□□□ -0.61
CCDC171-208ENST00000486641 RASSF3Q86WH2 238 aa11.22□□□□□ -0.61
CCDC171-208ENST00000486641 PDSS2Q86YH6 399 aa11.22□□□□□ -0.61
CCDC171-208ENST00000486641 TREML1Q86YW5 311 aa11.22□□□□□ -0.61
CCDC171-208ENST00000486641 ZBED8Q8IZ13 594 aa11.22□□□□□ -0.61
CCDC171-208ENST00000486641 SLC25A41Q8N5S1 370 aa11.22□□□□□ -0.61
CCDC171-208ENST00000486641 P2RX7Q99572 595 aaKnown RBP11.22□□□□□ -0.61
CCDC171-208ENST00000486641 THTPAQ9BU02 230 aa11.22□□□□□ -0.61
CCDC171-208ENST00000486641 FHDC1Q9C0D6 1143 aaPredicted RBP11.22□□□□□ -0.61
CCDC171-208ENST00000486641 SSU72Q9NP77 194 aaKnown RBP11.22□□□□□ -0.61
CCDC171-208ENST00000486641 DNAJB4Q9UDY4 337 aa11.22□□□□□ -0.61
CCDC171-208ENST00000486641 SLC24A2Q9UI40 661 aa11.22□□□□□ -0.61
CCDC171-208ENST00000486641 PLA2G4CQ9UP65 541 aa11.22□□□□□ -0.61
CCDC171-208ENST00000486641 NHSQ6T4R5 1651 aa11.22□□□□□ -0.61
CCDC171-208ENST00000486641 FAM237BA0A1B0GVD1 139 aa11.21□□□□□ -0.61
CCDC171-208ENST00000486641 DNALI1O14645 258 aaPredicted RBP11.21□□□□□ -0.61
CCDC171-208ENST00000486641 ATP9BO43861 1147 aa11.21□□□□□ -0.61
CCDC171-208ENST00000486641 BANF1O75531 89 aa11.21□□□□□ -0.61
CCDC171-208ENST00000486641 TM7SF2O76062 418 aa11.21□□□□□ -0.61
CCDC171-208ENST00000486641 TMCC1O94876 653 aa11.21□□□□□ -0.61
CCDC171-208ENST00000486641 PIM1P11309 404 aaPredicted RBP11.21□□□□□ -0.61
CCDC171-208ENST00000486641 ETS1P14921 441 aa11.21□□□□□ -0.61
CCDC171-208ENST00000486641 GSTO1P78417 241 aa11.21□□□□□ -0.61
CCDC171-208ENST00000486641 MED21Q13503 144 aa11.21□□□□□ -0.61
CCDC171-208ENST00000486641 EFTUD2Q15029 972 aaKnown RBP eCLIP11.21□□□□□ -0.61
CCDC171-208ENST00000486641 SLC15A2Q16348 729 aa11.21□□□□□ -0.61
CCDC171-208ENST00000486641 TRMT5Q32P41 509 aaKnown RBP11.21□□□□□ -0.61
CCDC171-208ENST00000486641 EPC2Q52LR7 807 aa11.21□□□□□ -0.61
CCDC171-208ENST00000486641 SFT2D3Q587I9 215 aa11.21□□□□□ -0.61
CCDC171-208ENST00000486641 MDH1BQ5I0G3 518 aa11.21□□□□□ -0.61
CCDC171-208ENST00000486641 SH2D4BQ5SQS7 431 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms