RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 ZNF461Q8TAF7 563 aa19.62■□□□□ 0.73
COL1A1-207ENST00000486572 FEZF2Q8TBJ5 459 aa19.62■□□□□ 0.73
COL1A1-207ENST00000486572 CD320Q9NPF0 282 aa19.62■□□□□ 0.73
COL1A1-207ENST00000486572 R3HCC1Q9Y3T6 440 aaKnown RBP19.62■□□□□ 0.73
COL1A1-207ENST00000486572 MTCL1Q9Y4B5 1905 aaKnown RBP19.62■□□□□ 0.73
COL1A1-207ENST00000486572 OR6C75A6NL08 312 aa19.61■□□□□ 0.73
COL1A1-207ENST00000486572 ABLIM3O94929 683 aa19.61■□□□□ 0.73
COL1A1-207ENST00000486572 CPB1P15086 417 aa19.61■□□□□ 0.73
COL1A1-207ENST00000486572 NR2F2P24468 414 aa19.61■□□□□ 0.73
COL1A1-207ENST00000486572 HOXA9P31269 272 aa19.61■□□□□ 0.73
COL1A1-207ENST00000486572 BFSP1Q12934 665 aa19.61■□□□□ 0.73
COL1A1-207ENST00000486572 ZCWPW2Q504Y3 356 aa19.61■□□□□ 0.73
COL1A1-207ENST00000486572 COBLL1Q53SF7 1204 aa19.61■□□□□ 0.73
COL1A1-207ENST00000486572 PPM1LQ5SGD2 360 aa19.61■□□□□ 0.73
COL1A1-207ENST00000486572 TPGS2Q68CL5 300 aa19.61■□□□□ 0.73
COL1A1-207ENST00000486572 CCDC149Q6ZUS6 474 aa19.61■□□□□ 0.73
COL1A1-207ENST00000486572 METTL23Q86XA0 190 aa19.61■□□□□ 0.73
COL1A1-207ENST00000486572 SLC7A14Q8TBB6 771 aa19.61■□□□□ 0.73
COL1A1-207ENST00000486572 SMG7Q92540 1137 aaKnown RBP19.61■□□□□ 0.73
COL1A1-207ENST00000486572 ZNF707Q96C28 371 aaPredicted RBP19.61■□□□□ 0.73
COL1A1-207ENST00000486572 BORCS6Q96GS4 357 aa19.61■□□□□ 0.73
COL1A1-207ENST00000486572 RPGRIP1Q96KN7 1286 aa19.61■□□□□ 0.73
COL1A1-207ENST00000486572 PRKD2Q9BZL6 878 aa19.61■□□□□ 0.73
COL1A1-207ENST00000486572 GZF1Q9H116 711 aaPredicted RBP19.61■□□□□ 0.73
COL1A1-207ENST00000486572 FRMD4BQ9Y2L6 1034 aa19.61■□□□□ 0.73
COL1A1-207ENST00000486572 LOC730098B7Z3J9 87 aa19.6■□□□□ 0.73
COL1A1-207ENST00000486572 HNRNPA1P09651 372 aaKnown RBP eCLIP19.6■□□□□ 0.73
COL1A1-207ENST00000486572 ATF2P15336 505 aa19.6■□□□□ 0.73
COL1A1-207ENST00000486572 RPL13P26373 211 aaKnown RBP19.6■□□□□ 0.73
COL1A1-207ENST00000486572 PRCPP42785 496 aa19.6■□□□□ 0.73
COL1A1-207ENST00000486572 CASP4P49662 377 aa19.6■□□□□ 0.73
COL1A1-207ENST00000486572 MYO1EQ12965 1108 aa19.6■□□□□ 0.73
COL1A1-207ENST00000486572 UVSSAQ2YD98 709 aa19.6■□□□□ 0.73
COL1A1-207ENST00000486572 EDRF1Q3B7T1 1238 aa19.6■□□□□ 0.73
COL1A1-207ENST00000486572 CEP135Q66GS9 1140 aa19.6■□□□□ 0.73
COL1A1-207ENST00000486572 SCARA3Q6AZY7 606 aa19.6■□□□□ 0.73
COL1A1-207ENST00000486572 RTL10Q7L3V2 364 aa19.6■□□□□ 0.73
COL1A1-207ENST00000486572 TRAPPC11Q7Z392 1133 aa19.6■□□□□ 0.73
COL1A1-207ENST00000486572 PIDD1Q9HB75 910 aa19.6■□□□□ 0.73
COL1A1-207ENST00000486572 TSHZ2Q9NRE2 1034 aa19.6■□□□□ 0.73
COL1A1-207ENST00000486572 DENND4AQ7Z401 1863 aa19.6■□□□□ 0.73
COL1A1-207ENST00000486572 C2orf16Q68DN1 1984 aa19.59■□□□□ 0.73
COL1A1-207ENST00000486572 MAPK13O15264 365 aa19.59■□□□□ 0.73
COL1A1-207ENST00000486572 ELF1P32519 619 aa19.59■□□□□ 0.73
COL1A1-207ENST00000486572 WSCD1Q658N2 575 aa19.59■□□□□ 0.73
COL1A1-207ENST00000486572 PLEKHO2Q8TD55 490 aa19.59■□□□□ 0.73
COL1A1-207ENST00000486572 PARD3BQ8TEW8 1205 aa19.59■□□□□ 0.73
COL1A1-207ENST00000486572 GDAP2Q9NXN4 497 aa19.59■□□□□ 0.73
COL1A1-207ENST00000486572 AFF4Q9UHB7 1163 aaKnown RBP19.59■□□□□ 0.73
COL1A1-207ENST00000486572 MAN1B1Q9UKM7 699 aa19.59■□□□□ 0.73
COL1A1-207ENST00000486572 MAFFQ9ULX9 164 aa19.59■□□□□ 0.73
COL1A1-207ENST00000486572 NR2E1Q9Y466 385 aa19.59■□□□□ 0.73
COL1A1-207ENST00000486572 C5orf42Q9H799 3197 aa19.59■□□□□ 0.73
COL1A1-207ENST00000486572 LRRIQ3A6PVS8 624 aaPredicted RBP19.58■□□□□ 0.72
COL1A1-207ENST00000486572 PRRG1O14668 218 aa19.58■□□□□ 0.72
COL1A1-207ENST00000486572 POU2F2P09086 479 aa19.58■□□□□ 0.72
COL1A1-207ENST00000486572 OR4Q2P0C623 313 aa19.58■□□□□ 0.72
COL1A1-207ENST00000486572 SP100P23497 879 aaPredicted RBP19.58■□□□□ 0.72
COL1A1-207ENST00000486572 AP3M2P53677 418 aa19.58■□□□□ 0.72
COL1A1-207ENST00000486572 CLDN10P78369 228 aa19.58■□□□□ 0.72
COL1A1-207ENST00000486572 TCEAL8Q8IYN2 117 aa19.58■□□□□ 0.72
COL1A1-207ENST00000486572 ZNF516Q92618 1163 aa19.58■□□□□ 0.72
COL1A1-207ENST00000486572 HPDLQ96IR7 371 aa19.58■□□□□ 0.72
COL1A1-207ENST00000486572 CYP4F11Q9HBI6 524 aa19.58■□□□□ 0.72
COL1A1-207ENST00000486572 SNX9Q9Y5X1 595 aa19.58■□□□□ 0.72
COL1A1-207ENST00000486572 CLUHO75153 1309 aa19.57■□□□□ 0.72
COL1A1-207ENST00000486572 CCL16O15467 120 aa19.57■□□□□ 0.72
COL1A1-207ENST00000486572 HUS1O60921 280 aa19.57■□□□□ 0.72
COL1A1-207ENST00000486572 XYLBO75191 536 aa19.57■□□□□ 0.72
COL1A1-207ENST00000486572 AKAP3O75969 853 aa19.57■□□□□ 0.72
COL1A1-207ENST00000486572 ADCY1Q08828 1119 aa19.57■□□□□ 0.72
COL1A1-207ENST00000486572 GPR17Q13304 367 aa19.57■□□□□ 0.72
COL1A1-207ENST00000486572 ADAM9Q13443 819 aa19.57■□□□□ 0.72
COL1A1-207ENST00000486572 STIM1Q13586 685 aa19.57■□□□□ 0.72
COL1A1-207ENST00000486572 CENPPQ6IPU0 288 aa19.57■□□□□ 0.72
COL1A1-207ENST00000486572 RNF19BQ6ZMZ0 732 aa19.57■□□□□ 0.72
COL1A1-207ENST00000486572 ADSSL1Q8N142 457 aa19.57■□□□□ 0.72
COL1A1-207ENST00000486572 THEM5Q8N1Q8 247 aa19.57■□□□□ 0.72
COL1A1-207ENST00000486572 TMEM86AQ8N2M4 240 aa19.57■□□□□ 0.72
COL1A1-207ENST00000486572 PDCL2Q8N4E4 241 aa19.57■□□□□ 0.72
COL1A1-207ENST00000486572 TOP6BLQ8N6T0 577 aa19.57■□□□□ 0.72
COL1A1-207ENST00000486572 OR10T2Q8NGX3 314 aa19.57■□□□□ 0.72
COL1A1-207ENST00000486572 TMC2Q8TDI7 906 aa19.57■□□□□ 0.72
COL1A1-207ENST00000486572 GBP4Q96PP9 640 aa19.57■□□□□ 0.72
COL1A1-207ENST00000486572 TSG101Q99816 390 aa19.57■□□□□ 0.72
COL1A1-207ENST00000486572 WDR6Q9NNW5 1121 aaKnown RBP19.57■□□□□ 0.72
COL1A1-207ENST00000486572 L1RE1Q9UN81 338 aa19.57■□□□□ 0.72
COL1A1-207ENST00000486572 USTQ9Y2C2 406 aa19.57■□□□□ 0.72
COL1A1-207ENST00000486572 PSMA7O14818 248 aa19.56■□□□□ 0.72
COL1A1-207ENST00000486572 SEC24AO95486 1093 aa19.56■□□□□ 0.72
COL1A1-207ENST00000486572 PSMC2P35998 433 aaKnown RBP19.56■□□□□ 0.72
COL1A1-207ENST00000486572 PPP1R2P41236 205 aa19.56■□□□□ 0.72
COL1A1-207ENST00000486572 DLG4P78352 724 aa19.56■□□□□ 0.72
COL1A1-207ENST00000486572 BIRC3Q13489 604 aa19.56■□□□□ 0.72
COL1A1-207ENST00000486572 TRPC3Q13507 836 aa19.56■□□□□ 0.72
COL1A1-207ENST00000486572 ISM2Q6H9L7 571 aa19.56■□□□□ 0.72
COL1A1-207ENST00000486572 INTS8Q75QN2 995 aaKnown RBP19.56■□□□□ 0.72
COL1A1-207ENST00000486572 FAM186BQ8IYM0 893 aa19.56■□□□□ 0.72
COL1A1-207ENST00000486572 TDRD5Q8NAT2 981 aaKnown RBP19.56■□□□□ 0.72
COL1A1-207ENST00000486572 RTP3Q9BQQ7 232 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms