RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 FAM26FQ5R3K3 315 aa19.89■□□□□ 0.77
PRPF40A-209ENST00000486100 IQCEQ6IPM2 695 aa19.89■□□□□ 0.77
PRPF40A-209ENST00000486100 UNC13DQ70J99 1090 aa19.89■□□□□ 0.77
PRPF40A-209ENST00000486100 EPM2AIP1Q7L775 607 aaPredicted RBP19.89■□□□□ 0.77
PRPF40A-209ENST00000486100 SIX5Q8N196 739 aa19.89■□□□□ 0.77
PRPF40A-209ENST00000486100 GPD1LQ8N335 351 aa19.89■□□□□ 0.77
PRPF40A-209ENST00000486100 MCRS1Q96EZ8 462 aa19.89■□□□□ 0.77
PRPF40A-209ENST00000486100 SLC2A4RGQ9NR83 387 aa19.89■□□□□ 0.77
PRPF40A-209ENST00000486100 ZDHHC9Q9Y397 364 aa19.89■□□□□ 0.77
PRPF40A-209ENST00000486100 PVALEFA0A1B0GWK0 134 aa19.88■□□□□ 0.77
PRPF40A-209ENST00000486100 KPNA7A9QM74 516 aa19.88■□□□□ 0.77
PRPF40A-209ENST00000486100 VNN2O95498 520 aa19.88■□□□□ 0.77
PRPF40A-209ENST00000486100 HOXD13P35453 343 aa19.88■□□□□ 0.77
PRPF40A-209ENST00000486100 PTPN5P54829 565 aa19.88■□□□□ 0.77
PRPF40A-209ENST00000486100 EHHADHQ08426 723 aa19.88■□□□□ 0.77
PRPF40A-209ENST00000486100 DUSP4Q13115 394 aa19.88■□□□□ 0.77
PRPF40A-209ENST00000486100 PRSS36Q5K4E3 855 aa19.88■□□□□ 0.77
PRPF40A-209ENST00000486100 CYP4A22Q5TCH4 519 aa19.88■□□□□ 0.77
PRPF40A-209ENST00000486100 CENPPQ6IPU0 288 aa19.88■□□□□ 0.77
PRPF40A-209ENST00000486100 METTL23Q86XA0 190 aa19.88■□□□□ 0.77
PRPF40A-209ENST00000486100 TMEM105Q8N8V8 129 aa19.88■□□□□ 0.77
PRPF40A-209ENST00000486100 FLCNQ8NFG4 579 aa19.88■□□□□ 0.77
PRPF40A-209ENST00000486100 ING5Q8WYH8 240 aa19.88■□□□□ 0.77
PRPF40A-209ENST00000486100 PGLYRP2Q96PD5 576 aa19.88■□□□□ 0.77
PRPF40A-209ENST00000486100 BLZF1Q9H2G9 400 aa19.88■□□□□ 0.77
PRPF40A-209ENST00000486100 CEP72Q9P209 647 aa19.88■□□□□ 0.77
PRPF40A-209ENST00000486100 ZNF318Q5VUA4 2279 aa19.88■□□□□ 0.77
PRPF40A-209ENST00000486100 CASP1P29466 404 aa19.87■□□□□ 0.77
PRPF40A-209ENST00000486100 PNPLA4P41247 253 aa19.87■□□□□ 0.77
PRPF40A-209ENST00000486100 AFMP43652 599 aa19.87■□□□□ 0.77
PRPF40A-209ENST00000486100 TCF15Q12870 199 aa19.87■□□□□ 0.77
PRPF40A-209ENST00000486100 SV2CQ496J9 727 aa19.87■□□□□ 0.77
PRPF40A-209ENST00000486100 PDZD4Q76G19 769 aaPredicted RBP19.87■□□□□ 0.77
PRPF40A-209ENST00000486100 CEP57L1Q8IYX8 460 aa19.87■□□□□ 0.77
PRPF40A-209ENST00000486100 THEM5Q8N1Q8 247 aa19.87■□□□□ 0.77
PRPF40A-209ENST00000486100 C1orf127Q8N9H9 656 aa19.87■□□□□ 0.77
PRPF40A-209ENST00000486100 LEMD2Q8NC56 503 aa19.87■□□□□ 0.77
PRPF40A-209ENST00000486100 GPR152Q8TDT2 470 aa19.87■□□□□ 0.77
PRPF40A-209ENST00000486100 NOC3LQ8WTT2 800 aaKnown RBP19.87■□□□□ 0.77
PRPF40A-209ENST00000486100 ZNF560Q96MR9 790 aa19.87■□□□□ 0.77
PRPF40A-209ENST00000486100 TMEM209Q96SK2 561 aa19.87■□□□□ 0.77
PRPF40A-209ENST00000486100 PDE11AQ9HCR9 933 aa19.87■□□□□ 0.77
PRPF40A-209ENST00000486100 AGAP1Q9UPQ3 857 aa19.87■□□□□ 0.77
PRPF40A-209ENST00000486100 YIPF1Q9Y548 306 aa19.87■□□□□ 0.77
PRPF40A-209ENST00000486100 MTMR11A4FU01 709 aa19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 KRBA1A5PL33 1030 aa19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 ZNF233A6NK53 670 aa19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 SLFN14P0C7P3 912 aa19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 CEBPBP17676 345 aa19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 HOXD11P31277 338 aaPredicted RBP19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 GPC5P78333 572 aa19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 PLD1Q13393 1074 aa19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 WSCD1Q658N2 575 aa19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 CWF19L1Q69YN2 538 aaKnown RBP19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 POTEHQ6S545 545 aa19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 HS6ST3Q8IZP7 471 aa19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 CSGALNACT2Q8N6G5 542 aa19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 ATAD1Q8NBU5 361 aa19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 OR10T2Q8NGX3 314 aa19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 LEO1Q8WVC0 666 aaPredicted RBP19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 TCEAL4Q96EI5 215 aa19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 CRISPLD1Q9H336 500 aa19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 KIAA1586Q9HCI6 787 aa19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 HSPBP1Q9NZL4 362 aa19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 HSFX1Q9UBD0 423 aa19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 SERTAD1Q9UHV2 236 aa19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 SLC27A5Q9Y2P5 690 aa19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 ZDBF2Q9HCK1 2354 aa19.86■□□□□ 0.77
PRPF40A-209ENST00000486100 MUC6Q6W4X9 2439 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 DOCK8Q8NF50 2099 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 TGFB1I1O43294 461 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 GALR2O43603 387 aaPredicted RBP19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 PI15O43692 258 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 ITGB3P05106 788 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 AOC1P19801 751 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 CMA1P23946 247 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 POLR2BP30876 1174 aaKnown RBP19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 CCR2P41597 374 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 ALDH1A3P47895 512 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 EPHB3P54753 998 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 EPHA5P54756 1037 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 SNRPFP62306 86 aaKnown RBP19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 KRT85P78386 507 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 CUL4BQ13620 913 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 SURF1Q15526 300 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 CXorf38Q8TB03 319 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 SCFD1Q8WVM8 642 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 SPATA32Q96LK8 384 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 RTP3Q9BQQ7 232 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 ZCWPW1Q9H0M4 648 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 IRF2BPLQ9H1B7 796 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 ASAH2Q9NR71 780 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 ITGA11Q9UKX5 1188 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 CA14Q9ULX7 337 aa19.85■□□□□ 0.77
PRPF40A-209ENST00000486100 UBE4BO95155 1302 aa19.84■□□□□ 0.77
PRPF40A-209ENST00000486100 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.84■□□□□ 0.77
PRPF40A-209ENST00000486100 STK25O00506 426 aa19.84■□□□□ 0.77
PRPF40A-209ENST00000486100 ECI2O75521 394 aa19.84■□□□□ 0.77
PRPF40A-209ENST00000486100 MYL4P12829 197 aa19.84■□□□□ 0.77
PRPF40A-209ENST00000486100 RBP5P82980 135 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms