RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 TEX101Q9BY14 249 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 LRRC27Q9C0I9 530 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 KLHL11Q9NVR0 708 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 USP25Q9UHP3 1055 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 AATKQ6ZMQ8 1374 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 TNIKQ9UKE5 1360 aa7.44□□□□□ -1.22
RTN4-214ENST00000486085 SHROOM2Q13796 1616 aa7.43□□□□□ -1.22
RTN4-214ENST00000486085 GRXCR1A8MXD5 290 aa7.43□□□□□ -1.22
RTN4-214ENST00000486085 DIRC3C9JPN6 131 aa7.43□□□□□ -1.22
RTN4-214ENST00000486085 RPS6KA4O75676 772 aa7.43□□□□□ -1.22
RTN4-214ENST00000486085 FCER1AP12319 257 aa7.43□□□□□ -1.22
RTN4-214ENST00000486085 PHKG2P15735 406 aa7.43□□□□□ -1.22
RTN4-214ENST00000486085 ADAM17P78536 824 aa7.43□□□□□ -1.22
RTN4-214ENST00000486085 USP39Q53GS9 565 aaKnown RBP7.43□□□□□ -1.22
RTN4-214ENST00000486085 RABL3Q5HYI8 236 aa7.43□□□□□ -1.22
RTN4-214ENST00000486085 SPDYAQ5MJ70 313 aa7.43□□□□□ -1.22
RTN4-214ENST00000486085 GDF7Q7Z4P5 450 aa7.43□□□□□ -1.22
RTN4-214ENST00000486085 USP37Q86T82 979 aa7.43□□□□□ -1.22
RTN4-214ENST00000486085 C1orf210Q8IVY1 113 aa7.43□□□□□ -1.22
RTN4-214ENST00000486085 PDPRQ8NCN5 879 aa7.43□□□□□ -1.22
RTN4-214ENST00000486085 ZSWIM1Q9BR11 485 aa7.43□□□□□ -1.22
RTN4-214ENST00000486085 GPR35Q9HC97 309 aa7.43□□□□□ -1.22
RTN4-214ENST00000486085 AURKAIP1Q9NWT8 199 aaPredicted RBP7.43□□□□□ -1.22
RTN4-214ENST00000486085 AGAP1Q9UPQ3 857 aa7.43□□□□□ -1.22
RTN4-214ENST00000486085 CDYLQ9Y232 598 aa7.43□□□□□ -1.22
RTN4-214ENST00000486085 TESMINQ9Y4I5 508 aa7.43□□□□□ -1.22
RTN4-214ENST00000486085 UGGT2Q9NYU1 1516 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 CEP170Q5SW79 1584 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 CHD1O14646 1710 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 CCDC78A2IDD5 438 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 AHRRA9YTQ3 701 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 TRIM24O15164 1050 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 MYL3P08590 195 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 ZNF20P17024 532 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 NEK3P51956 506 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 SUMO3P55854 103 aaPredicted RBP7.42□□□□□ -1.22
RTN4-214ENST00000486085 EFEMP1Q12805 493 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 TOB2Q14106 344 aaPredicted RBP7.42□□□□□ -1.22
RTN4-214ENST00000486085 HABP2Q14520 560 aaPredicted RBP7.42□□□□□ -1.22
RTN4-214ENST00000486085 CDSNQ15517 529 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 NRN1LQ496H8 165 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 LCE3BQ5TA77 95 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 NSUN7Q8NE18 718 aaKnown RBP7.42□□□□□ -1.22
RTN4-214ENST00000486085 IL17DQ8TAD2 202 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 APIPQ96GX9 242 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 PNKPQ96T60 521 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 KRTAP3-1Q9BYR8 98 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 NUP62CLQ9H1M0 184 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 RNPEPQ9H4A4 650 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 ZNF768Q9H5H4 540 aaKnown RBP7.42□□□□□ -1.22
RTN4-214ENST00000486085 KIAA1586Q9HCI6 787 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 CHST12Q9NRB3 414 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 CPNE7Q9UBL6 633 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 CHST2Q9Y4C5 530 aa7.42□□□□□ -1.22
RTN4-214ENST00000486085 CTTNBP2Q8WZ74 1663 aa7.41□□□□□ -1.22
RTN4-214ENST00000486085 A0A1B0GTW7 788 aa7.41□□□□□ -1.22
RTN4-214ENST00000486085 ANO9A1A5B4 782 aa7.41□□□□□ -1.22
RTN4-214ENST00000486085 E9PLN8 166 aa7.41□□□□□ -1.22
RTN4-214ENST00000486085 M0QYG6 137 aa7.41□□□□□ -1.22
RTN4-214ENST00000486085 MYO1FO00160 1098 aa7.41□□□□□ -1.22
RTN4-214ENST00000486085 TBX3O15119 743 aa7.41□□□□□ -1.22
RTN4-214ENST00000486085 FRS3O43559 492 aa7.41□□□□□ -1.22
RTN4-214ENST00000486085 SPATA31D3P0C874 917 aa7.41□□□□□ -1.22
RTN4-214ENST00000486085 BRAFP15056 766 aa7.41□□□□□ -1.22
RTN4-214ENST00000486085 PICALMQ13492 652 aa7.41□□□□□ -1.22
RTN4-214ENST00000486085 SPATS1Q496A3 300 aa7.41□□□□□ -1.22
RTN4-214ENST00000486085 SYCP2LQ5T4T6 812 aa7.41□□□□□ -1.22
RTN4-214ENST00000486085 SPATA31D4Q6ZUB0 917 aa7.41□□□□□ -1.22
RTN4-214ENST00000486085 OR6B3Q8NGW1 331 aa7.41□□□□□ -1.22
RTN4-214ENST00000486085 VKORC1Q9BQB6 163 aa7.41□□□□□ -1.22
RTN4-214ENST00000486085 TRIM54Q9BYV2 358 aa7.41□□□□□ -1.22
RTN4-214ENST00000486085 TINAGL1Q9GZM7 467 aaPredicted RBP7.41□□□□□ -1.22
RTN4-214ENST00000486085 HSFX1Q9UBD0 423 aa7.41□□□□□ -1.22
RTN4-214ENST00000486085 OGDHLQ9ULD0 1010 aa7.41□□□□□ -1.22
RTN4-214ENST00000486085 TSC22D4Q9Y3Q8 395 aa7.41□□□□□ -1.22
RTN4-214ENST00000486085 TBC1D4O60343 1298 aa7.4□□□□□ -1.22
RTN4-214ENST00000486085 UNC5CO95185 931 aa7.4□□□□□ -1.22
RTN4-214ENST00000486085 KIF20AO95235 890 aa7.4□□□□□ -1.22
RTN4-214ENST00000486085 SLC5A1P13866 664 aa7.4□□□□□ -1.22
RTN4-214ENST00000486085 FGFR4P22455 802 aa7.4□□□□□ -1.22
RTN4-214ENST00000486085 HSD11B2P80365 405 aa7.4□□□□□ -1.22
RTN4-214ENST00000486085 FAM189BP81408 668 aa7.4□□□□□ -1.22
RTN4-214ENST00000486085 CNGA2Q16280 664 aa7.4□□□□□ -1.22
RTN4-214ENST00000486085 FOXR2Q6PJQ5 311 aa7.4□□□□□ -1.22
RTN4-214ENST00000486085 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.4□□□□□ -1.22
RTN4-214ENST00000486085 CFAP52Q8N1V2 620 aa7.4□□□□□ -1.22
RTN4-214ENST00000486085 PARD3BQ8TEW8 1205 aa7.4□□□□□ -1.22
RTN4-214ENST00000486085 KBTBD7Q8WVZ9 684 aa7.4□□□□□ -1.22
RTN4-214ENST00000486085 DDX17Q92841 729 aaKnown RBP7.4□□□□□ -1.22
RTN4-214ENST00000486085 NAA15Q9BXJ9 866 aaKnown RBP7.4□□□□□ -1.22
RTN4-214ENST00000486085 ZNF287Q9HBT7 754 aa7.4□□□□□ -1.22
RTN4-214ENST00000486085 SACM1LQ9NTJ5 587 aa7.4□□□□□ -1.22
RTN4-214ENST00000486085 MRPS18AQ9NVS2 196 aaKnown RBP7.4□□□□□ -1.22
RTN4-214ENST00000486085 PARPBPQ9NWS1 579 aa7.4□□□□□ -1.22
RTN4-214ENST00000486085 CEP72Q9P209 647 aa7.4□□□□□ -1.22
RTN4-214ENST00000486085 SRRDQ9UH36 339 aa7.4□□□□□ -1.22
RTN4-214ENST00000486085 MAP3K2Q9Y2U5 619 aa7.4□□□□□ -1.22
RTN4-214ENST00000486085 MED16Q9Y2X0 877 aa7.4□□□□□ -1.22
RTN4-214ENST00000486085 EFCAB5A4FU69 1503 aa7.4□□□□□ -1.22
RTN4-214ENST00000486085 IQGAP2Q13576 1575 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms