RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 GTPBP4Q9BZE4 634 aaKnown RBP5.12□□□□□ -1.59
VPS41-213ENST00000485955 SLAMF7Q9NQ25 335 aa5.12□□□□□ -1.59
VPS41-213ENST00000485955 INTS13Q9NVM9 706 aa5.12□□□□□ -1.59
VPS41-213ENST00000485955 IP6K2Q9UHH9 426 aa5.12□□□□□ -1.59
VPS41-213ENST00000485955 DMTF1Q9Y222 760 aa5.12□□□□□ -1.59
VPS41-213ENST00000485955 POLHQ9Y253 713 aa5.12□□□□□ -1.59
VPS41-213ENST00000485955 YY2O15391 372 aa5.11□□□□□ -1.59
VPS41-213ENST00000485955 ANXA1P04083 346 aa5.11□□□□□ -1.59
VPS41-213ENST00000485955 SRGNP10124 158 aa5.11□□□□□ -1.59
VPS41-213ENST00000485955 FOLR3P41439 243 aa5.11□□□□□ -1.59
VPS41-213ENST00000485955 ANXA11P50995 505 aaKnown RBP5.11□□□□□ -1.59
VPS41-213ENST00000485955 HABP2Q14520 560 aaPredicted RBP5.11□□□□□ -1.59
VPS41-213ENST00000485955 KIAA0895LQ68EN5 471 aa5.11□□□□□ -1.59
VPS41-213ENST00000485955 DPY19L2P1Q6NXN4 242 aa5.11□□□□□ -1.59
VPS41-213ENST00000485955 TAPT1Q6NXT6 567 aa5.11□□□□□ -1.59
VPS41-213ENST00000485955 FBXO42Q6P3S6 717 aa5.11□□□□□ -1.59
VPS41-213ENST00000485955 HEATR3Q7Z4Q2 680 aa5.11□□□□□ -1.59
VPS41-213ENST00000485955 PPP1R3BQ86XI6 285 aa5.11□□□□□ -1.59
VPS41-213ENST00000485955 PDSS2Q86YH6 399 aa5.11□□□□□ -1.59
VPS41-213ENST00000485955 SH2D3CQ8N5H7 860 aa5.11□□□□□ -1.59
VPS41-213ENST00000485955 CAGE1Q8TC20 777 aa5.11□□□□□ -1.59
VPS41-213ENST00000485955 POC1BQ8TC44 478 aa5.11□□□□□ -1.59
VPS41-213ENST00000485955 SCAMP4Q969E2 229 aa5.11□□□□□ -1.59
VPS41-213ENST00000485955 HOOK2Q96ED9 719 aa5.11□□□□□ -1.59
VPS41-213ENST00000485955 TRIB1Q96RU8 372 aa5.11□□□□□ -1.59
VPS41-213ENST00000485955 TCF7L1Q9HCS4 588 aa5.11□□□□□ -1.59
VPS41-213ENST00000485955 AASDHPPTQ9NRN7 309 aa5.11□□□□□ -1.59
VPS41-213ENST00000485955 LRIT1Q9P2V4 623 aa5.11□□□□□ -1.59
VPS41-213ENST00000485955 ABCF2Q9UG63 623 aa5.11□□□□□ -1.59
VPS41-213ENST00000485955 INSL6Q9Y581 213 aa5.11□□□□□ -1.59
VPS41-213ENST00000485955 ZNF785A8K8V0 405 aa5.1□□□□□ -1.59
VPS41-213ENST00000485955 TOR1BO14657 336 aa5.1□□□□□ -1.59
VPS41-213ENST00000485955 PROM1O43490 865 aa5.1□□□□□ -1.59
VPS41-213ENST00000485955 PEX1O43933 1283 aa5.1□□□□□ -1.59
VPS41-213ENST00000485955 MATN4O95460 622 aa5.1□□□□□ -1.59
VPS41-213ENST00000485955 FTLP02792 175 aaPredicted RBP5.1□□□□□ -1.59
VPS41-213ENST00000485955 PIK3CGP48736 1102 aa5.1□□□□□ -1.59
VPS41-213ENST00000485955 ZNF135P52742 658 aaPredicted RBP5.1□□□□□ -1.59
VPS41-213ENST00000485955 PIGFQ07326 219 aa5.1□□□□□ -1.59
VPS41-213ENST00000485955 ERCC6LQ2NKX8 1250 aa5.1□□□□□ -1.59
VPS41-213ENST00000485955 PGS1Q32NB8 556 aa5.1□□□□□ -1.59
VPS41-213ENST00000485955 MICALCLQ6ZW33 695 aa5.1□□□□□ -1.59
VPS41-213ENST00000485955 AOPEPQ8N6M6 819 aa5.1□□□□□ -1.59
VPS41-213ENST00000485955 ACTRT2Q8TDY3 377 aa5.1□□□□□ -1.59
VPS41-213ENST00000485955 TNPO1Q92973 898 aaKnown RBP5.1□□□□□ -1.59
VPS41-213ENST00000485955 RGMAQ96B86 450 aa5.1□□□□□ -1.59
VPS41-213ENST00000485955 MRPL46Q9H2W6 279 aaKnown RBP5.1□□□□□ -1.59
VPS41-213ENST00000485955 SMOC2Q9H3U7 446 aa5.1□□□□□ -1.59
VPS41-213ENST00000485955 GPR35Q9HC97 309 aa5.1□□□□□ -1.59
VPS41-213ENST00000485955 ETAA1Q9NY74 926 aa5.1□□□□□ -1.59
VPS41-213ENST00000485955 TLK1Q9UKI8 766 aa5.1□□□□□ -1.59
VPS41-213ENST00000485955 NEU2Q9Y3R4 380 aa5.1□□□□□ -1.59
VPS41-213ENST00000485955 VWC2LB2RUY7 222 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 POLRMTO00411 1230 aaKnown RBP5.09□□□□□ -1.59
VPS41-213ENST00000485955 SLC16A6O15403 523 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 ALDH1L1O75891 902 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 C1QL1O75973 258 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 ABLIM3O94929 683 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 KIF20AO95235 890 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 AHSGP02765 367 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 ELFN1P0C7U0 828 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 FTH1P19P0C7X4 201 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 PPP3CBP16298 524 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 TOB1P50616 345 aaPredicted RBP5.09□□□□□ -1.59
VPS41-213ENST00000485955 KIF22Q14807 665 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 THEMIS2Q5TEJ8 643 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 MYCBPAPQ8TBZ2 947 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 TFAP2BQ92481 460 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 SNX19Q92543 992 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 FBXL20Q96IG2 436 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 SMOQ99835 787 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 KIAA1586Q9HCI6 787 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 IL17RBQ9NRM6 502 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 GNL3LQ9NVN8 582 aaKnown RBP5.09□□□□□ -1.59
VPS41-213ENST00000485955 RLIMQ9NVW2 624 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 DDX56Q9NY93 547 aaKnown RBP5.09□□□□□ -1.59
VPS41-213ENST00000485955 CFAP97Q9P2B7 532 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 PCDHA1Q9Y5I3 950 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 COX11Q9Y6N1 276 aa5.09□□□□□ -1.59
VPS41-213ENST00000485955 hCG_2014768A0A024R1R8 64 aa5.08□□□□□ -1.6
VPS41-213ENST00000485955 E7ENX8 843 aa5.08□□□□□ -1.6
VPS41-213ENST00000485955 MPPED1O15442 326 aa5.08□□□□□ -1.6
VPS41-213ENST00000485955 VPS4BO75351 444 aa5.08□□□□□ -1.6
VPS41-213ENST00000485955 ARIH2O95376 493 aa5.08□□□□□ -1.6
VPS41-213ENST00000485955 GNAI3P08754 354 aa5.08□□□□□ -1.6
VPS41-213ENST00000485955 PF4V1P10720 104 aa5.08□□□□□ -1.6
VPS41-213ENST00000485955 RARBP10826 455 aa5.08□□□□□ -1.6
VPS41-213ENST00000485955 TYRP14679 529 aa5.08□□□□□ -1.6
VPS41-213ENST00000485955 AKAP5P24588 427 aa5.08□□□□□ -1.6
VPS41-213ENST00000485955 MAPK10P53779 464 aa5.08□□□□□ -1.6
VPS41-213ENST00000485955 CACNA2D1P54289 1103 aa5.08□□□□□ -1.6
VPS41-213ENST00000485955 GNAI1P63096 354 aa5.08□□□□□ -1.6
VPS41-213ENST00000485955 TAP2Q03519 686 aa5.08□□□□□ -1.6
VPS41-213ENST00000485955 HLXQ14774 488 aaPredicted RBP5.08□□□□□ -1.6
VPS41-213ENST00000485955 PREPLQ4J6C6 727 aaPredicted RBP5.08□□□□□ -1.6
VPS41-213ENST00000485955 KAZNQ674X7 775 aa5.08□□□□□ -1.6
VPS41-213ENST00000485955 TAF2Q6P1X5 1199 aa5.08□□□□□ -1.6
VPS41-213ENST00000485955 RD3Q7Z3Z2 195 aa5.08□□□□□ -1.6
VPS41-213ENST00000485955 USP37Q86T82 979 aa5.08□□□□□ -1.6
VPS41-213ENST00000485955 FAM9AQ8IZU1 332 aaPredicted RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms