RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 SASS6Q6UVJ0 657 aa12.74□□□□□ -0.37
HPS4-214ENST00000485842 RSPO2Q6UXX9 243 aaPredicted RBP12.74□□□□□ -0.37
HPS4-214ENST00000485842 SPATA31D4Q6ZUB0 917 aa12.74□□□□□ -0.37
HPS4-214ENST00000485842 METTL23Q86XA0 190 aa12.74□□□□□ -0.37
HPS4-214ENST00000485842 SLC22A17Q8WUG5 538 aa12.74□□□□□ -0.37
HPS4-214ENST00000485842 CASP10Q92851 521 aa12.74□□□□□ -0.37
HPS4-214ENST00000485842 BORCS6Q96GS4 357 aa12.74□□□□□ -0.37
HPS4-214ENST00000485842 APOL5Q9BWW9 433 aa12.74□□□□□ -0.37
HPS4-214ENST00000485842 SRRTQ9BXP5 876 aaKnown RBP12.74□□□□□ -0.37
HPS4-214ENST00000485842 ARMCX3Q9UH62 379 aaPredicted RBP12.74□□□□□ -0.37
HPS4-214ENST00000485842 DACH1Q9UI36 760 aa12.74□□□□□ -0.37
HPS4-214ENST00000485842 FBXL5Q9UKA1 691 aa12.74□□□□□ -0.37
HPS4-214ENST00000485842 DSEQ9UL01 958 aa12.74□□□□□ -0.37
HPS4-214ENST00000485842 BACE2Q9Y5Z0 518 aa12.74□□□□□ -0.37
HPS4-214ENST00000485842 REV3LO60673 3130 aa12.73□□□□□ -0.37
HPS4-214ENST00000485842 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.73□□□□□ -0.37
HPS4-214ENST00000485842 IKBKBO14920 756 aa12.73□□□□□ -0.37
HPS4-214ENST00000485842 TGM5O43548 720 aa12.73□□□□□ -0.37
HPS4-214ENST00000485842 VNN1O95497 513 aa12.73□□□□□ -0.37
HPS4-214ENST00000485842 CPB1P15086 417 aa12.73□□□□□ -0.37
HPS4-214ENST00000485842 NCOA4Q13772 614 aa12.73□□□□□ -0.37
HPS4-214ENST00000485842 KCNC3Q14003 757 aa12.73□□□□□ -0.37
HPS4-214ENST00000485842 STX1AQ16623 288 aa12.73□□□□□ -0.37
HPS4-214ENST00000485842 ZNF699Q32M78 642 aa12.73□□□□□ -0.37
HPS4-214ENST00000485842 ZACNQ401N2 412 aa12.73□□□□□ -0.37
HPS4-214ENST00000485842 ANKRD54Q6NXT1 300 aa12.73□□□□□ -0.37
HPS4-214ENST00000485842 FOXR2Q6PJQ5 311 aa12.73□□□□□ -0.37
HPS4-214ENST00000485842 SV2AQ7L0J3 742 aa12.73□□□□□ -0.37
HPS4-214ENST00000485842 FILIP1Q7Z7B0 1213 aa12.73□□□□□ -0.37
HPS4-214ENST00000485842 ELMO3Q96BJ8 720 aa12.73□□□□□ -0.37
HPS4-214ENST00000485842 METTL14Q9HCE5 456 aaKnown RBP12.73□□□□□ -0.37
HPS4-214ENST00000485842 TMEM8AQ9HCN3 771 aa12.73□□□□□ -0.37
HPS4-214ENST00000485842 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.73□□□□□ -0.371e-7■■■■■ 102.5
HPS4-214ENST00000485842 MAN1C1Q9NR34 630 aa12.73□□□□□ -0.37
HPS4-214ENST00000485842 DZANK1Q9NVP4 752 aa12.73□□□□□ -0.37
HPS4-214ENST00000485842 CLEC1BQ9P126 229 aa12.73□□□□□ -0.37
HPS4-214ENST00000485842 CD207Q9UJ71 328 aa12.73□□□□□ -0.37
HPS4-214ENST00000485842 L1RE1Q9UN81 338 aa12.73□□□□□ -0.37
HPS4-214ENST00000485842 STX10O60499 249 aa12.72□□□□□ -0.37
HPS4-214ENST00000485842 OAZ2O95190 189 aa12.72□□□□□ -0.37
HPS4-214ENST00000485842 FGFR1OPO95684 399 aaKnown RBP12.72□□□□□ -0.37
HPS4-214ENST00000485842 HLA-DRAP01903 254 aa12.72□□□□□ -0.37
HPS4-214ENST00000485842 CYP11A1P05108 521 aa12.72□□□□□ -0.37
HPS4-214ENST00000485842 OR4Q2P0C623 313 aa12.72□□□□□ -0.37
HPS4-214ENST00000485842 MXI1P50539 228 aa12.72□□□□□ -0.37
HPS4-214ENST00000485842 TNNC1P63316 161 aa12.72□□□□□ -0.37
HPS4-214ENST00000485842 ROR1Q01973 937 aa12.72□□□□□ -0.37
HPS4-214ENST00000485842 ENPEPQ07075 957 aa12.72□□□□□ -0.37
HPS4-214ENST00000485842 MRPL58Q14197 206 aaKnown RBP12.72□□□□□ -0.37
HPS4-214ENST00000485842 KLHL40Q2TBA0 621 aa12.72□□□□□ -0.37
HPS4-214ENST00000485842 WDR72Q3MJ13 1102 aa12.72□□□□□ -0.37
HPS4-214ENST00000485842 RARS2Q5T160 578 aaKnown RBP12.72□□□□□ -0.37
HPS4-214ENST00000485842 SCARA5Q6ZMJ2 495 aa12.72□□□□□ -0.37
HPS4-214ENST00000485842 C11orf57Q6ZUT1 292 aaPredicted RBP12.72□□□□□ -0.37
HPS4-214ENST00000485842 CREBRFQ8IUR6 639 aa12.72□□□□□ -0.37
HPS4-214ENST00000485842 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.72□□□□□ -0.37
HPS4-214ENST00000485842 ADGRF2Q8IZF7 708 aa12.72□□□□□ -0.37
HPS4-214ENST00000485842 PDCL2Q8N4E4 241 aa12.72□□□□□ -0.37
HPS4-214ENST00000485842 C12orf76Q8N812 135 aaPredicted RBP12.72□□□□□ -0.37
HPS4-214ENST00000485842 KREMEN2Q8NCW0 462 aa12.72□□□□□ -0.37
HPS4-214ENST00000485842 TAS1R2Q8TE23 839 aa12.72□□□□□ -0.37
HPS4-214ENST00000485842 MED15Q96RN5 788 aa12.72□□□□□ -0.37
HPS4-214ENST00000485842 MMS19Q96T76 1030 aa12.72□□□□□ -0.37
HPS4-214ENST00000485842 GDAP2Q9NXN4 497 aa12.72□□□□□ -0.37
HPS4-214ENST00000485842 NXF1Q9UBU9 619 aaKnown RBP12.72□□□□□ -0.37
HPS4-214ENST00000485842 MTCL1Q9Y4B5 1905 aaKnown RBP12.71□□□□□ -0.37
HPS4-214ENST00000485842 WDR27A2RRH5 827 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 OR6C75A6NL08 312 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 TBC1D4O60343 1298 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 GNA14O95837 355 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 ERCC5P28715 1186 aaPredicted RBP12.71□□□□□ -0.37
HPS4-214ENST00000485842 ATICP31939 592 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 KCNQ1P51787 676 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 RAB33AQ14088 237 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 AAK1Q2M2I8 961 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 ZNF667Q5HYK9 610 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 LIN9Q5TKA1 542 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 KRT39Q6A163 491 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 SLC8B1Q6J4K2 584 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 SYCE2Q6PIF2 218 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 ELMSAN1Q6PJG2 1045 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 TMEM184AQ6ZMB5 413 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 C15orf39Q6ZRI6 1047 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 FRMD5Q7Z6J6 570 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 OSTM1Q86WC4 334 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 THEM5Q8N1Q8 247 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 TOP6BLQ8N6T0 577 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 OR10T2Q8NGX3 314 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 SLC35C1Q96A29 364 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 MSLNLQ96KJ4 702 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 CNOT6LQ96LI5 555 aaKnown RBP12.71□□□□□ -0.37
HPS4-214ENST00000485842 TMEM209Q96SK2 561 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 PI4K2AQ9BTU6 479 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 IMPG2Q9BZV3 1241 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 XYLT2Q9H1B5 865 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 SFXN1Q9H9B4 322 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 ANO10Q9NW15 660 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 FBXW11Q9UKB1 542 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 POLIQ9UNA4 740 aa12.71□□□□□ -0.37
HPS4-214ENST00000485842 RFPL2O75678 378 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms