RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 FRS3O43559 492 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 AHCYL1O43865 530 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 TSPAN3O60637 253 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 DGKIO75912 1065 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 CDKL5O76039 1030 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 USP1O94782 785 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 SMC2O95347 1197 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 PDHA1P08559 390 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 KRT15P19012 456 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 HOXA5P20719 270 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 PSMA4P25789 261 aaKnown RBP4.93□□□□□ -1.62
RTN4-213ENST00000485749 GJA4P35212 333 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 SMARCA2P51531 1590 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 AGFG1P52594 562 aaKnown RBP4.93□□□□□ -1.62
RTN4-213ENST00000485749 RBM5P52756 815 aaKnown RBP eCLIP4.93□□□□□ -1.62
RTN4-213ENST00000485749 SLC16A1P53985 500 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 DLG4P78352 724 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 DEUP1Q05D60 604 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 UGT8Q16880 541 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 KIAA0753Q2KHM9 967 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 TTC39AQ5SRH9 613 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 OLFML2BQ68BL8 750 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 CYP4F22Q6NT55 531 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 ESRP1Q6NXG1 681 aaKnown RBP4.93□□□□□ -1.62
RTN4-213ENST00000485749 C11orf88Q6PI97 169 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 ESPNLQ6ZVH7 1005 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 CEP68Q76N32 757 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 PPP1R42Q7Z4L9 355 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 ZER1Q7Z7L7 766 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 GALNT7Q86SF2 657 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 PTRH1Q86Y79 214 aaKnown RBP4.93□□□□□ -1.62
RTN4-213ENST00000485749 CPNE8Q86YQ8 564 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 RIOX2Q8IUF8 465 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 NUP93Q8N1F7 819 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 THEMISQ8N1K5 641 aaPredicted RBP4.93□□□□□ -1.62
RTN4-213ENST00000485749 NAT8LQ8N9F0 302 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 TOR1AIP2Q8NFQ8 470 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 NLGN2Q8NFZ4 835 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 TNIP2Q8NFZ5 429 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 SLC30A5Q8TAD4 765 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 COA7Q96BR5 231 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 CDCA5Q96FF9 252 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 INTS4Q96HW7 963 aaKnown RBP4.93□□□□□ -1.62
RTN4-213ENST00000485749 ZC3H10Q96K80 434 aaKnown RBP4.93□□□□□ -1.62
RTN4-213ENST00000485749 C16orf45Q96MC5 204 aaPredicted RBP4.93□□□□□ -1.62
RTN4-213ENST00000485749 COG8Q96MW5 612 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 SH3GL1Q99961 368 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 TREX2Q9BQ50 279 aaPredicted RBP4.93□□□□□ -1.62
RTN4-213ENST00000485749 GPATCH1Q9BRR8 931 aaKnown RBP4.93□□□□□ -1.62
RTN4-213ENST00000485749 UTP14AQ9BVJ6 771 aaKnown RBP4.93□□□□□ -1.62
RTN4-213ENST00000485749 JAM3Q9BX67 310 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 TEX13BQ9BXU2 312 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 KRTAP4-5Q9BYR2 181 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 KIAA1683Q9H0B3 1180 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 SIL1Q9H173 461 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 VPS11Q9H270 941 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 CLSTN2Q9H4D0 955 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 RSAD1Q9HA92 442 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 SLC6A20Q9NP91 592 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 FNIP2Q9P278 1114 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 MSRAQ9UJ68 235 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 ATP23Q9Y6H3 246 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 FANCIQ9NVI1 1328 aa4.93□□□□□ -1.62
RTN4-213ENST00000485749 DHX57Q6P158 1386 aaKnown RBP4.92□□□□□ -1.62
RTN4-213ENST00000485749 F8VZ95 297 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 F8W031 263 aaPredicted RBP4.92□□□□□ -1.62
RTN4-213ENST00000485749 EIF3FO00303 357 aaPredicted RBP4.92□□□□□ -1.62
RTN4-213ENST00000485749 KRIT1O00522 736 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 B3GALT2O43825 422 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 STAM2O75886 525 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 UBXN7O94888 489 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 YEATS4O95619 227 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 ZGLP1P0C6A0 271 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 HSPA1AP0DMV8 641 aaKnown RBP4.92□□□□□ -1.62
RTN4-213ENST00000485749 HSPA1BP0DMV9 641 aaKnown RBP4.92□□□□□ -1.62
RTN4-213ENST00000485749 TOP1P11387 765 aaKnown RBP4.92□□□□□ -1.62
RTN4-213ENST00000485749 BMP7P18075 431 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 PTX3P26022 381 aaPredicted RBP4.92□□□□□ -1.62
RTN4-213ENST00000485749 WASP42768 502 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 MTHFRP42898 656 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 MATR3P43243 847 aaKnown RBP eCLIP4.92□□□□□ -1.62
RTN4-213ENST00000485749 ERVFC1P60507 584 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 NUCB2P80303 420 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 SRSF2Q01130 221 aaKnown RBP4.92□□□□□ -1.62
RTN4-213ENST00000485749 KIF23Q02241 960 aaPredicted RBP4.92□□□□□ -1.62
RTN4-213ENST00000485749 LAPTM5Q13571 262 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 LLGL1Q15334 1064 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 MEA1Q16626 185 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.92□□□□□ -1.62
RTN4-213ENST00000485749 GAB4Q2WGN9 574 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 PGS1Q32NB8 556 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 HSF5Q4G112 596 aaPredicted RBP4.92□□□□□ -1.62
RTN4-213ENST00000485749 PREPLQ4J6C6 727 aaPredicted RBP4.92□□□□□ -1.62
RTN4-213ENST00000485749 ANO6Q4KMQ2 910 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 TOR2AQ5JU69 321 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 MROH9Q5TGP6 573 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 RNF220Q5VTB9 566 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 HLA-DQA1Q5Y7H0 255 aa4.92□□□□□ -1.62
RTN4-213ENST00000485749 ALKBH5Q6P6C2 394 aaKnown RBP4.92□□□□□ -1.62
RTN4-213ENST00000485749 DBX2Q6ZNG2 339 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms