RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 SMIM28A0A1B0GU29 152 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 ANKRD62A6NC57 917 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 RCCD1A6NED2 376 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 BTNL10A8MVZ5 291 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 THAP12O43422 761 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 RTN2O75298 545 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 URI1O94763 535 aaPredicted RBP10.18□□□□□ -0.78
CTSA-208ENST00000485627 MMEP08473 750 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 WEE2P0C1S8 567 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 TMEM253P0C7T8 217 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 GZMAP12544 262 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 SELPP16109 830 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 PNPLA4P41247 253 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 MAGEA10P43363 369 aaPredicted RBP10.18□□□□□ -0.78
CTSA-208ENST00000485627 CDK7P50613 346 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 FMO1Q01740 532 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 XKR4Q5GH76 650 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 PPP1R2P3Q6NXS1 205 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 TRIM72Q6ZMU5 477 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 LRRC52Q8N7C0 313 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 RNF169Q8NCN4 708 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 SLC30A5Q8TAD4 765 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 C18orf25Q96B23 403 aaPredicted RBP10.18□□□□□ -0.78
CTSA-208ENST00000485627 ZMAT2Q96NC0 199 aaKnown RBP10.18□□□□□ -0.78
CTSA-208ENST00000485627 WDR24Q96S15 920 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 NAPGQ99747 312 aaPredicted RBP10.18□□□□□ -0.78
CTSA-208ENST00000485627 ADAM2Q99965 735 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 SYT11Q9BT88 431 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 IRX2Q9BZI1 471 aaPredicted RBP10.18□□□□□ -0.78
CTSA-208ENST00000485627 FAM124BQ9H5Z6 455 aaPredicted RBP10.18□□□□□ -0.78
CTSA-208ENST00000485627 TUBGCP4Q9UGJ1 667 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 NOCTQ9UK39 431 aaKnown RBP10.18□□□□□ -0.78
CTSA-208ENST00000485627 POLIQ9UNA4 740 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 CNTN6Q9UQ52 1028 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 CEP83Q9Y592 693 aa10.18□□□□□ -0.78
CTSA-208ENST00000485627 A0A0U1RQF3 1178 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 DCDC2CA8MYV0 355 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 MED7O43513 233 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 BUB1O43683 1085 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 PQBP1O60828 265 aaKnown RBP10.17□□□□□ -0.78
CTSA-208ENST00000485627 ZNF623O75123 536 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 MOCS3O95396 460 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 ABL1P00519 1130 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 FTLP02792 175 aaPredicted RBP10.17□□□□□ -0.78
CTSA-208ENST00000485627 THP07101 528 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 ABCB4P21439 1286 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 ASPAP45381 313 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 ATN1P54259 1190 aaPredicted RBP10.17□□□□□ -0.78
CTSA-208ENST00000485627 GALCP54803 685 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 TUBB2AQ13885 445 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 DSC3Q14574 896 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 ZBTB6Q15916 424 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 SV2CQ496J9 727 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 ZNF394Q53GI3 561 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 C9orf57Q5W0N0 161 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 FAM43BQ6ZT52 329 aaPredicted RBP10.17□□□□□ -0.78
CTSA-208ENST00000485627 LRRC8DQ7L1W4 858 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 MRPL10Q7Z7H8 261 aaKnown RBP10.17□□□□□ -0.78
CTSA-208ENST00000485627 FAM126BQ8IXS8 530 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 TRIM11Q96F44 468 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 CALR3Q96L12 384 aaKnown RBP10.17□□□□□ -0.78
CTSA-208ENST00000485627 GUCD1Q96NT3 240 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 TUBB2BQ9BVA1 445 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 TRAIPQ9BWF2 469 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 FTHL17Q9BXU8 183 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 PACSIN1Q9BY11 444 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 BCO2Q9BYV7 579 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 RSAD1Q9HA92 442 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 ACP6Q9NPH0 428 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 RAPGEFL1Q9UHV5 662 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 DUSP10Q9Y6W6 482 aa10.17□□□□□ -0.78
CTSA-208ENST00000485627 A0A0A6YYK5 440 aaPredicted RBP10.16□□□□□ -0.78
CTSA-208ENST00000485627 MGEA5O60502 916 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 PAEPP09466 180 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 CD19P15391 556 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 CHRNB2P17787 502 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 MLH1P40692 756 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 NSFP46459 744 aaKnown RBP10.16□□□□□ -0.78
CTSA-208ENST00000485627 RAP1GAPP47736 663 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 TAF6P49848 677 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 ZNF132P52740 706 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 CDH8P55286 799 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 GPC5P78333 572 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 CLEC16AQ2KHT3 1053 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 SCARA3Q6AZY7 606 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 ACAD10Q6JQN1 1059 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 SLC39A5Q6ZMH5 540 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 RHOT2Q8IXI1 618 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 UBR7Q8N806 425 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 CXorf38Q8TB03 319 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 RFFLQ8WZ73 363 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 DDX1Q92499 740 aaKnown RBP10.16□□□□□ -0.78
CTSA-208ENST00000485627 LPPQ93052 612 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 GAD1Q99259 594 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 ISCUQ9H1K1 167 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 SMYD3Q9H7B4 428 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 RNF19AQ9NV58 838 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 TAS2R14Q9NYV8 317 aa10.16□□□□□ -0.78
CTSA-208ENST00000485627 BARX2Q9UMQ3 279 aaPredicted RBP10.16□□□□□ -0.78
CTSA-208ENST00000485627 NENFQ9UMX5 172 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms