RNA–Protein interactions for RNA: ENST00000485365.1

SFPQ-208, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 693 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-208	ENST00000485365	CXorf67	Q86X51	503 aa	Predicted RBP	5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	LPIN2	Q92539	896 aa		5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	ERCC4	Q92889	916 aa	Predicted RBP	5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	ZNF512	Q96ME7	567 aa	Predicted RBP	5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	FOXB1	Q99853	325 aa		5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	GGA3	Q9NZ52	723 aa		5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	SORCS3	Q9UPU3	1222 aa		5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	MYO3B	Q8WXR4	1341 aa		5.74	□□□□□ -1.49
SFPQ-208	ENST00000485365	POLR2A	P24928	1970 aa	Known RBP	5.73	□□□□□ -1.49
SFPQ-208	ENST00000485365	RASGRP1	O95267	797 aa		5.73	□□□□□ -1.49
SFPQ-208	ENST00000485365	ERBB2	P04626	1255 aa		5.73	□□□□□ -1.49
SFPQ-208	ENST00000485365	CENPB	P07199	599 aa	Predicted RBP	5.73	□□□□□ -1.49
SFPQ-208	ENST00000485365	VSIG10L2	P0DP72	767 aa		5.73	□□□□□ -1.49
SFPQ-208	ENST00000485365	IL1R1	P14778	569 aa		5.73	□□□□□ -1.49
SFPQ-208	ENST00000485365	ADORA1	P30542	326 aa		5.73	□□□□□ -1.49
SFPQ-208	ENST00000485365	GABRE	P78334	506 aa		5.73	□□□□□ -1.49
SFPQ-208	ENST00000485365	ATP8B2	P98198	1209 aa		5.73	□□□□□ -1.49
SFPQ-208	ENST00000485365	TIGD2	Q4W5G0	525 aa		5.73	□□□□□ -1.49
SFPQ-208	ENST00000485365	PLEKHG4	Q58EX7	1191 aa		5.73	□□□□□ -1.49
SFPQ-208	ENST00000485365	PAPD7	Q5XG87	772 aa	Known RBP	5.73	□□□□□ -1.49
SFPQ-208	ENST00000485365	SPATC1	Q76KD6	591 aa		5.73	□□□□□ -1.49
SFPQ-208	ENST00000485365	ATG9A	Q7Z3C6	839 aa		5.73	□□□□□ -1.49
SFPQ-208	ENST00000485365	C2orf69	Q8N8R5	385 aa		5.73	□□□□□ -1.49
SFPQ-208	ENST00000485365	CPT1C	Q8TCG5	803 aa		5.73	□□□□□ -1.49
SFPQ-208	ENST00000485365	CDC6	Q99741	560 aa		5.73	□□□□□ -1.49
SFPQ-208	ENST00000485365	R3HDML	Q9H3Y0	253 aa		5.73	□□□□□ -1.49
SFPQ-208	ENST00000485365	ABCF2	Q9UG63	623 aa		5.73	□□□□□ -1.49
SFPQ-208	ENST00000485365	PCDHAC2	Q9Y5I4	1007 aa		5.73	□□□□□ -1.49
SFPQ-208	ENST00000485365	COX11	Q9Y6N1	276 aa		5.73	□□□□□ -1.49
SFPQ-208	ENST00000485365	LAMB2	P55268	1798 aa		5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	TIAM2	Q8IVF5	1701 aa		5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365		A0A1B0GUL7	405 aa		5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	TCP10L2	B9ZVM9	353 aa		5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	WNT10B	O00744	389 aa		5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	CIAO1	O76071	339 aa		5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	NF2	P35240	595 aa		5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	PHKA1	P46020	1223 aa		5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	HUNK	P57058	714 aa		5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	ZNF280A	P59817	542 aa	Predicted RBP	5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	RAB33A	Q14088	237 aa		5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	MVP	Q14764	893 aa	Known RBP	5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	TTC39A	Q5SRH9	613 aa		5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	C20orf194	Q5TEA3	1177 aa		5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	CST9	Q5W186	159 aa		5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365		Q6YL49	198 aa		5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	C15orf52	Q6ZUT6	534 aa	Known RBP	5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	CERS5	Q8N5B7	392 aa		5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	DNAJC5G	Q8N7S2	189 aa		5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	PLA2G15	Q8NCC3	412 aa		5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	TDRD7	Q8NHU6	1098 aa	Known RBP	5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	ST8SIA2	Q92186	375 aa		5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	CDCA5	Q96FF9	252 aa		5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	PRMT6	Q96LA8	375 aa	Predicted RBP	5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	CCDC8	Q9H0W5	538 aa	Predicted RBP	5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	CHMP4B	Q9H444	224 aa	Known RBP	5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	TDRD3	Q9H7E2	651 aa	Known RBP	5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	DDX19B	Q9UMR2	479 aa		5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	COQ6	Q9Y2Z9	468 aa		5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	PASK	Q96RG2	1323 aa		5.72	□□□□□ -1.49
SFPQ-208	ENST00000485365	WDR90	Q96KV7	1748 aa		5.71	□□□□□ -1.49
SFPQ-208	ENST00000485365	UBE2Q2L	H0YL09	131 aa		5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	FGFR2	P21802	821 aa		5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	RGS3	P49796	1198 aa		5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	CACNB3	P54284	484 aa		5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	SF3A1	Q15459	793 aa	Known RBP	5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	DGKD	Q16760	1214 aa		5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	DCAF17	Q5H9S7	520 aa	Predicted RBP	5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	CCDC158	Q5M9N0	1113 aa		5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	KRT40	Q6A162	431 aa		5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	CEP85	Q6P2H3	762 aa		5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	MOB2	Q70IA6	237 aa		5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	BHLHA9	Q7RTU4	235 aa		5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	RD3	Q7Z3Z2	195 aa		5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	VGLL2	Q8N8G2	317 aa		5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	WDR66	Q8TBY9	1149 aa		5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	TBC1D22A	Q8WUA7	517 aa		5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	ARL8A	Q96BM9	186 aa		5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	CELF4	Q9BZC1	486 aa	Known RBP	5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	ZNF768	Q9H5H4	540 aa	Known RBP	5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	GBA2	Q9HCG7	927 aa	Predicted RBP	5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	IL1RAPL2	Q9NP60	686 aa		5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	RAI14	Q9P0K7	980 aa		5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	EXOC6B	Q9Y2D4	811 aa		5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	DUOX1	Q9NRD9	1551 aa		5.71	□□□□□ -1.5
SFPQ-208	ENST00000485365	CENPVL1	A0A0U1RR11	272 aa		5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	CCDC85C	A6NKD9	419 aa		5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	HMMR	O75330	724 aa		5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	STC2	O76061	302 aa		5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	PRL	P01236	227 aa		5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	JUN	P05412	331 aa	Known RBP	5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	CDK4	P11802	303 aa		5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	ITGB6	P18564	788 aa		5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	TAP1	Q03518	808 aa		5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	TCP10	Q12799	353 aa		5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	SPIDR	Q14159	915 aa		5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	ARMC9	Q7Z3E5	817 aa		5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	AACS	Q86V21	672 aa		5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	DZIP1	Q86YF9	867 aa	Known RBP	5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	APOBEC3F	Q8IUX4	373 aa	Known RBP	5.7	□□□□□ -1.5
SFPQ-208	ENST00000485365	TEKT1	Q969V4	418 aa		5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms