RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 PPP4R1LQ9P1A2 415 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 AFF4Q9UHB7 1163 aaKnown RBP5.08□□□□□ -1.6
PTCD3-214ENST00000483925 ITGB1BP2Q9UKP3 347 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 ASB1Q9Y576 335 aa5.08□□□□□ -1.6
PTCD3-214ENST00000483925 MYPNQ86TC9 1320 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 SYNDIG1LA6NDD5 238 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 NPEPPSL1A6NEC2 478 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 TISP43B9A030 160 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 B9A039 149 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 TRIM38O00635 465 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 ARHGAP6O43182 974 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 CYP7B1O75881 506 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 C4BPAP04003 597 aaKnown RBP5.07□□□□□ -1.6
PTCD3-214ENST00000483925 EN2P19622 333 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-214ENST00000483925 TACR2P21452 398 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 XPAP23025 273 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-214ENST00000483925 GALNSP34059 522 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 STAT1P42224 750 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 GDF5P43026 501 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 MAN2A2P49641 1150 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 GPR15P49685 360 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 TUBP50607 506 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 CREMQ03060 361 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 ROM1Q03395 351 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 MGAT2Q10469 447 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 MEA1Q16626 185 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 CCDC178Q5BJE1 867 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 PRAMEF9Q5VWM5 478 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 CATSPERGQ6ZRH7 1159 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 HEATR3Q7Z4Q2 680 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 LYSMD2Q8IV50 215 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 PHOSPHO1Q8TCT1 267 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 DPF2Q92785 391 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 NELL1Q92832 810 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 C7orf26Q96N11 449 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 ZMAT2Q96NC0 199 aaKnown RBP5.07□□□□□ -1.6
PTCD3-214ENST00000483925 TMEM168Q9H0V1 697 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 PRDM12Q9H4Q4 367 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 PREBQ9HCU5 417 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 RBM12Q9NTZ6 932 aaKnown RBP5.07□□□□□ -1.6
PTCD3-214ENST00000483925 ORC3Q9UBD5 711 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-214ENST00000483925 CPNE7Q9UBL6 633 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 ACAD8Q9UKU7 415 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 MAN2B2Q9Y2E5 1009 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 PCDHB1Q9Y5F3 818 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 PCDHA13Q9Y5I0 950 aa5.07□□□□□ -1.6
PTCD3-214ENST00000483925 MAGED1Q9Y5V3 778 aaPredicted RBP5.07□□□□□ -1.6
PTCD3-214ENST00000483925 PGPEP1LA6NFU8 196 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 FAM90A27PA6NNH2 459 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 GOLGA6L22H0YM25 854 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 HGSO14964 777 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-214ENST00000483925 DAPK3O43293 454 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 ANXA2P07355 339 aaKnown RBP5.06□□□□□ -1.6
PTCD3-214ENST00000483925 TYRP14679 529 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 NPTX2P47972 431 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 HMGA2P52926 109 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 DRG2P55039 364 aaKnown RBP5.06□□□□□ -1.6
PTCD3-214ENST00000483925 NR1H2P55055 460 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 KRT83P78385 493 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 PPARAQ07869 468 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 ICAM4Q14773 271 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 PLCB4Q15147 1175 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 FAM205BPQ63HN1 556 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 CCDC129Q6ZRS4 1044 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 KANSL1Q7Z3B3 1105 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-214ENST00000483925 CIR1Q86X95 450 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-214ENST00000483925 C2CD5Q86YS7 1000 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 TRIM48Q8IWZ4 208 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 TCP11L2Q8N4U5 519 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 HIPK4Q8NE63 616 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 BRIX1Q8TDN6 353 aaKnown RBP5.06□□□□□ -1.6
PTCD3-214ENST00000483925 HERVK_113Q902F9 699 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 HTRA1Q92743 480 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 NMD3Q96D46 503 aaKnown RBP5.06□□□□□ -1.6
PTCD3-214ENST00000483925 EID2BQ96D98 161 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 TOE1Q96GM8 510 aaKnown RBP5.06□□□□□ -1.6
PTCD3-214ENST00000483925 YTHDC1Q96MU7 727 aaKnown RBP5.06□□□□□ -1.6
PTCD3-214ENST00000483925 CLIC6Q96NY7 704 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 KLC2Q9H0B6 622 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 DHX36Q9H2U1 1008 aaKnown RBP5.06□□□□□ -1.6
PTCD3-214ENST00000483925 SACM1LQ9NTJ5 587 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-214ENST00000483925 ABCF2Q9UG63 623 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 FEZ2Q9UHY8 353 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-214ENST00000483925 CPA4Q9UI42 421 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 SCOCQ9UIL1 159 aa5.06□□□□□ -1.6
PTCD3-214ENST00000483925 A0A1W2PPH5 198 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 PODXLO00592 558 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 NRP2O60462 931 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 DKC1O60832 514 aaKnown RBP eCLIP5.05□□□□□ -1.6
PTCD3-214ENST00000483925 PRLP01236 227 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 HNRNPCP07910 306 aaKnown RBP eCLIP5.05□□□□□ -1.6
PTCD3-214ENST00000483925 SLC3A2P08195 630 aaKnown RBP5.05□□□□□ -1.6
PTCD3-214ENST00000483925 ALOX12P18054 663 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 OAS2P29728 719 aaKnown RBP5.05□□□□□ -1.6
PTCD3-214ENST00000483925 CTNNA1P35221 906 aaKnown RBP5.05□□□□□ -1.6
PTCD3-214ENST00000483925 PPP2CBP62714 309 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 PPP2CAP67775 309 aa5.05□□□□□ -1.6
PTCD3-214ENST00000483925 HTRA4P83105 476 aaPredicted RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms