RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 NSFP46459 744 aaKnown RBP27.98■■■□□ 2.07
SHOX2-204ENST00000483851 ZMAT2Q96NC0 199 aaKnown RBP27.98■■■□□ 2.07
SHOX2-204ENST00000483851 ZNF518BQ9C0D4 1074 aa27.98■■■□□ 2.07
SHOX2-204ENST00000483851 PCDHGC3Q9UN70 934 aa27.98■■■□□ 2.07
SHOX2-204ENST00000483851 ST3GAL5Q9UNP4 418 aa27.98■■■□□ 2.07
SHOX2-204ENST00000483851 STXBP5LQ9Y2K9 1186 aa27.98■■■□□ 2.07
SHOX2-204ENST00000483851 IPPQ9Y573 584 aa27.98■■■□□ 2.07
SHOX2-204ENST00000483851 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.98■■■□□ 2.07
SHOX2-204ENST00000483851 KIF4AO95239 1232 aa27.97■■■□□ 2.07
SHOX2-204ENST00000483851 CYP3A5P20815 502 aa27.97■■■□□ 2.07
SHOX2-204ENST00000483851 LHX8Q68G74 356 aa27.97■■■□□ 2.07
SHOX2-204ENST00000483851 TWF2Q6IBS0 349 aaKnown RBP27.97■■■□□ 2.07
SHOX2-204ENST00000483851 PHF13Q86YI8 300 aaPredicted RBP27.97■■■□□ 2.07
SHOX2-204ENST00000483851 HACE1Q8IYU2 909 aa27.97■■■□□ 2.07
SHOX2-204ENST00000483851 MCOLN2Q8IZK6 566 aa27.97■■■□□ 2.07
SHOX2-204ENST00000483851 WNT8BQ93098 351 aa27.97■■■□□ 2.07
SHOX2-204ENST00000483851 ZNF653Q96CK0 615 aa27.97■■■□□ 2.07
SHOX2-204ENST00000483851 UBXN6Q9BZV1 441 aa27.97■■■□□ 2.07
SHOX2-204ENST00000483851 POLIQ9UNA4 740 aa27.97■■■□□ 2.07
SHOX2-204ENST00000483851 HES2Q9Y543 173 aa27.97■■■□□ 2.07
SHOX2-204ENST00000483851 SQORQ9Y6N5 450 aa27.97■■■□□ 2.07
SHOX2-204ENST00000483851 NCK2O43639 380 aa27.96■■■□□ 2.07
SHOX2-204ENST00000483851 BUB1BO60566 1050 aaPredicted RBP27.96■■■□□ 2.07
SHOX2-204ENST00000483851 SASH3O75995 380 aa27.96■■■□□ 2.07
SHOX2-204ENST00000483851 NOMO3P69849 1222 aa27.96■■■□□ 2.07
SHOX2-204ENST00000483851 FAM26DQ5JW98 314 aa27.96■■■□□ 2.07
SHOX2-204ENST00000483851 NT5DC3Q86UY8 548 aa27.96■■■□□ 2.07
SHOX2-204ENST00000483851 PBKQ96KB5 322 aa27.96■■■□□ 2.07
SHOX2-204ENST00000483851 MMS19Q96T76 1030 aa27.96■■■□□ 2.07
SHOX2-204ENST00000483851 AMFRQ9UKV5 643 aa27.96■■■□□ 2.07
SHOX2-204ENST00000483851 COG5Q9UP83 839 aa27.96■■■□□ 2.07
SHOX2-204ENST00000483851 TNNC1P63316 161 aa27.95■■■□□ 2.07
SHOX2-204ENST00000483851 SCARA5Q6ZMJ2 495 aa27.95■■■□□ 2.07
SHOX2-204ENST00000483851 ARRDC4Q8NCT1 418 aa27.95■■■□□ 2.07
SHOX2-204ENST00000483851 SMG8Q8ND04 991 aaKnown RBP27.95■■■□□ 2.07
SHOX2-204ENST00000483851 CYFIP2Q96F07 1278 aa27.95■■■□□ 2.07
SHOX2-204ENST00000483851 FUT8Q9BYC5 575 aa27.95■■■□□ 2.07
SHOX2-204ENST00000483851 SEZ6LQ9BYH1 1024 aa27.95■■■□□ 2.07
SHOX2-204ENST00000483851 TLR3O15455 904 aaKnown RBP27.95■■■□□ 2.06
SHOX2-204ENST00000483851 MED7O43513 233 aa27.95■■■□□ 2.06
SHOX2-204ENST00000483851 TUBBP07437 444 aa27.95■■■□□ 2.06
SHOX2-204ENST00000483851 ATF7P17544 494 aaPredicted RBP27.95■■■□□ 2.06
SHOX2-204ENST00000483851 PAFAH1B1P43034 410 aa27.95■■■□□ 2.06
SHOX2-204ENST00000483851 INCA1Q0VD86 236 aa27.95■■■□□ 2.06
SHOX2-204ENST00000483851 USP38Q8NB14 1042 aa27.95■■■□□ 2.06
SHOX2-204ENST00000483851 CAGE1Q8TC20 777 aa27.95■■■□□ 2.06
SHOX2-204ENST00000483851 SMIM28A0A1B0GU29 152 aa27.94■■■□□ 2.06
SHOX2-204ENST00000483851 CILPO75339 1184 aa27.94■■■□□ 2.06
SHOX2-204ENST00000483851 CDH5P33151 784 aaPredicted RBP27.94■■■□□ 2.06
SHOX2-204ENST00000483851 THPOP40225 353 aa27.94■■■□□ 2.06
SHOX2-204ENST00000483851 C1QBPQ07021 282 aaKnown RBP27.94■■■□□ 2.06
SHOX2-204ENST00000483851 COG1Q8WTW3 980 aa27.94■■■□□ 2.06
SHOX2-204ENST00000483851 HES6Q96HZ4 224 aa27.94■■■□□ 2.06
SHOX2-204ENST00000483851 TRAIPQ9BWF2 469 aa27.94■■■□□ 2.06
SHOX2-204ENST00000483851 CNOT8Q9UFF9 292 aaKnown RBP27.94■■■□□ 2.06
SHOX2-204ENST00000483851 PARP2Q9UGN5 583 aa27.94■■■□□ 2.06
SHOX2-204ENST00000483851 NOD1Q9Y239 953 aa27.94■■■□□ 2.06
SHOX2-204ENST00000483851 ZNF185O15231 689 aa27.93■■■□□ 2.06
SHOX2-204ENST00000483851 AKAP5P24588 427 aa27.93■■■□□ 2.06
SHOX2-204ENST00000483851 GABPB1Q06547 395 aaPredicted RBP27.93■■■□□ 2.06
SHOX2-204ENST00000483851 CFAP221Q4G0U5 840 aa27.93■■■□□ 2.06
SHOX2-204ENST00000483851 NAA35Q5VZE5 725 aa27.93■■■□□ 2.06
SHOX2-204ENST00000483851 MON1BQ7L1V2 547 aa27.93■■■□□ 2.06
SHOX2-204ENST00000483851 CAPZA3Q96KX2 299 aa27.93■■■□□ 2.06
SHOX2-204ENST00000483851 RPS6KC1Q96S38 1066 aa27.93■■■□□ 2.06
SHOX2-204ENST00000483851 KIAA1257Q9ULG3 409 aa27.93■■■□□ 2.06
SHOX2-204ENST00000483851 FRMPD3Q5JV73 1810 aa27.93■■■□□ 2.06
SHOX2-204ENST00000483851 CALCAP01258 141 aa27.93■■■□□ 2.06
SHOX2-204ENST00000483851 PNPLA4P41247 253 aa27.93■■■□□ 2.06
SHOX2-204ENST00000483851 GUCY2FP51841 1108 aa27.93■■■□□ 2.06
SHOX2-204ENST00000483851 LONRF2Q1L5Z9 754 aa27.93■■■□□ 2.06
SHOX2-204ENST00000483851 BEND6Q5SZJ8 279 aaPredicted RBP27.93■■■□□ 2.06
SHOX2-204ENST00000483851 CCDC181Q5TID7 509 aa27.93■■■□□ 2.06
SHOX2-204ENST00000483851 LIN9Q5TKA1 542 aa27.93■■■□□ 2.06
SHOX2-204ENST00000483851 SLC43A3Q8NBI5 491 aa27.93■■■□□ 2.06
SHOX2-204ENST00000483851 TMEM35BQ8NCS4 154 aa27.93■■■□□ 2.06
SHOX2-204ENST00000483851 ZNF564Q8TBZ8 553 aaPredicted RBP27.93■■■□□ 2.06
SHOX2-204ENST00000483851 NUP85Q9BW27 656 aa27.93■■■□□ 2.06
SHOX2-204ENST00000483851 BARX2Q9UMQ3 279 aaPredicted RBP27.93■■■□□ 2.06
SHOX2-204ENST00000483851 CEP83Q9Y592 693 aa27.93■■■□□ 2.06
SHOX2-204ENST00000483851 CTSHP09668 335 aa27.92■■■□□ 2.06
SHOX2-204ENST00000483851 RAD23BP54727 409 aa27.92■■■□□ 2.06
SHOX2-204ENST00000483851 TRIM71Q2Q1W2 868 aaKnown RBP27.92■■■□□ 2.06
SHOX2-204ENST00000483851 FBXO47Q5MNV8 452 aa27.92■■■□□ 2.06
SHOX2-204ENST00000483851 CPA5Q8WXQ8 436 aa27.92■■■□□ 2.06
SHOX2-204ENST00000483851 SELENOOQ9BVL4 669 aa27.92■■■□□ 2.06
SHOX2-204ENST00000483851 APOL6Q9BWW8 343 aa27.92■■■□□ 2.06
SHOX2-204ENST00000483851 SDCBP2Q9H190 292 aa27.92■■■□□ 2.06
SHOX2-204ENST00000483851 LHX5Q9H2C1 402 aa27.92■■■□□ 2.06
SHOX2-204ENST00000483851 SMYD3Q9H7B4 428 aa27.92■■■□□ 2.06
SHOX2-204ENST00000483851 ERVK-5Q9HDB9 667 aa27.92■■■□□ 2.06
SHOX2-204ENST00000483851 FAM105AQ9NUU6 356 aa27.92■■■□□ 2.06
SHOX2-204ENST00000483851 MIF4GDA9UHW6 222 aaKnown RBP27.91■■■□□ 2.06
SHOX2-204ENST00000483851 C9orf57Q5W0N0 161 aa27.91■■■□□ 2.06
SHOX2-204ENST00000483851 WDR93Q6P2C0 686 aa27.91■■■□□ 2.06
SHOX2-204ENST00000483851 PDE2AO00408 941 aaPredicted RBP27.91■■■□□ 2.06
SHOX2-204ENST00000483851 PIRO00625 290 aa27.91■■■□□ 2.06
SHOX2-204ENST00000483851 MAP2K7O14733 419 aa27.91■■■□□ 2.06
SHOX2-204ENST00000483851 RHOXF2BP0C7M4 288 aa27.91■■■□□ 2.06
SHOX2-204ENST00000483851 RAB27AP51159 221 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms