RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 CDH7Q9ULB5 785 aa14.99□□□□□ -0.01
VARS-225ENST00000482996 INSL5Q9Y5Q6 135 aa14.99□□□□□ -0.01
VARS-225ENST00000482996 ANK1P16157 1881 aa14.99□□□□□ -0.01
VARS-225ENST00000482996 FAM237AA0A1B0GTK4 181 aa14.98□□□□□ -0.01
VARS-225ENST00000482996 SEC24AO95486 1093 aa14.98□□□□□ -0.01
VARS-225ENST00000482996 CYP11A1P05108 521 aa14.98□□□□□ -0.01
VARS-225ENST00000482996 PTPN2P17706 415 aa14.98□□□□□ -0.01
VARS-225ENST00000482996 POLR2BP30876 1174 aaKnown RBP14.98□□□□□ -0.01
VARS-225ENST00000482996 WNT7BP56706 349 aa14.98□□□□□ -0.01
VARS-225ENST00000482996 PSMD2Q13200 908 aa14.98□□□□□ -0.01
VARS-225ENST00000482996 GPR17Q13304 367 aa14.98□□□□□ -0.01
VARS-225ENST00000482996 BMT2Q1RMZ1 405 aa14.98□□□□□ -0.01
VARS-225ENST00000482996 RNF19BQ6ZMZ0 732 aa14.98□□□□□ -0.01
VARS-225ENST00000482996 THEM5Q8N1Q8 247 aa14.98□□□□□ -0.01
VARS-225ENST00000482996 C1orf127Q8N9H9 656 aa14.98□□□□□ -0.01
VARS-225ENST00000482996 GOLGA5Q8TBA6 731 aa14.98□□□□□ -0.01
VARS-225ENST00000482996 CCDC47Q96A33 483 aaKnown RBP14.98□□□□□ -0.01
VARS-225ENST00000482996 ANKRD36BP1Q96IX9 119 aa14.98□□□□□ -0.01
VARS-225ENST00000482996 PDE11AQ9HCR9 933 aa14.98□□□□□ -0.01
VARS-225ENST00000482996 HCFC1R1Q9NWW0 138 aa14.98□□□□□ -0.01
VARS-225ENST00000482996 DNMT3BQ9UBC3 853 aaKnown RBP14.98□□□□□ -0.01
VARS-225ENST00000482996 RAPGEFL1Q9UHV5 662 aa14.98□□□□□ -0.01
VARS-225ENST00000482996 ITGA11Q9UKX5 1188 aa14.98□□□□□ -0.01
VARS-225ENST00000482996 AGAP1Q9UPQ3 857 aa14.98□□□□□ -0.01
VARS-225ENST00000482996 MRPS23Q9Y3D9 190 aaKnown RBP14.98□□□□□ -0.01
VARS-225ENST00000482996 DOCK8Q8NF50 2099 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 KPNA7A9QM74 516 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 CLIC2O15247 247 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 TGFB1I1O43294 461 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 TNNC2P02585 160 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 ITGB3P05106 788 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 RHOP08100 348 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 CYP2J2P51589 502 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 NDUFA8P51970 172 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 RBP5P82980 135 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 PLD1Q13393 1074 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 KNOP1Q1ED39 458 aaKnown RBP14.97□□□□□ -0.01
VARS-225ENST00000482996 IQCEQ6IPM2 695 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 CBWD2Q8IUF1 395 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 FBXL6Q8N531 539 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 CSGALNACT2Q8N6G5 542 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 LRRC52Q8N7C0 313 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 XXYLT1Q8NBI6 393 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 ASIC4Q96FT7 647 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 CCDC34Q96HJ3 373 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 ZNF512Q96ME7 567 aaPredicted RBP14.97□□□□□ -0.01
VARS-225ENST00000482996 AVENQ9NQS1 362 aaPredicted RBP14.97□□□□□ -0.01
VARS-225ENST00000482996 INTS13Q9NVM9 706 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 MUC6Q6W4X9 2439 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 SCN1AP35498 2009 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 DOCK6Q96HP0 2047 aa14.97□□□□□ -0.01
VARS-225ENST00000482996 GOLGA6L4A6NEF3 574 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 ZNF197O14709 1029 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 KLRC4O43908 158 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 KRT19P08727 400 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 OR4Q2P0C623 313 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 TWF1Q12792 350 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 BFSP1Q12934 665 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 SNRNP35Q16560 246 aaKnown RBP14.96□□□□□ -0.01
VARS-225ENST00000482996 DUOXA2Q1HG44 320 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 KMT5BQ4FZB7 885 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 WSCD1Q658N2 575 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 MTSS1LQ765P7 747 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 C12orf56Q8IXR9 622 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 ITFG1Q8TB96 612 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 FGF13Q92913 245 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 PGLYRP2Q96PD5 576 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 FNBP1Q96RU3 617 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 CORO1BQ9BR76 489 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 MTMR12Q9C0I1 747 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 SMOC2Q9H3U7 446 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 GDPD2Q9HCC8 539 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 FBXL21Q9UKT6 434 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 DUSP12Q9UNI6 340 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 ARIH1Q9Y4X5 557 aaPredicted RBP14.96□□□□□ -0.01
VARS-225ENST00000482996 YIPF1Q9Y548 306 aa14.96□□□□□ -0.01
VARS-225ENST00000482996 TCHHQ07283 1943 aa14.96□□□□□ -0.02
VARS-225ENST00000482996 ANHXE9PGG2 379 aa14.95□□□□□ -0.02
VARS-225ENST00000482996 HUS1O60921 280 aa14.95□□□□□ -0.02
VARS-225ENST00000482996 PRPF40AO75400 957 aaKnown RBP14.95□□□□□ -0.02
VARS-225ENST00000482996 KIF20AO95235 890 aa14.95□□□□□ -0.02
VARS-225ENST00000482996 RPN1P04843 607 aaKnown RBP14.95□□□□□ -0.02
VARS-225ENST00000482996 ALDH1A3P47895 512 aa14.95□□□□□ -0.02
VARS-225ENST00000482996 EPHB3P54753 998 aa14.95□□□□□ -0.02
VARS-225ENST00000482996 MYO1EQ12965 1108 aa14.95□□□□□ -0.02
VARS-225ENST00000482996 STK4Q13043 487 aa14.95□□□□□ -0.02
VARS-225ENST00000482996 DUSP4Q13115 394 aa14.95□□□□□ -0.02
VARS-225ENST00000482996 HTR4Q13639 388 aa14.95□□□□□ -0.02
VARS-225ENST00000482996 CYP4A22Q5TCH4 519 aa14.95□□□□□ -0.02
VARS-225ENST00000482996 LMBRD2Q68DH5 695 aaPredicted RBP14.95□□□□□ -0.02
VARS-225ENST00000482996 KRBA2Q6ZNG9 492 aa14.95□□□□□ -0.02
VARS-225ENST00000482996 PDZD4Q76G19 769 aaPredicted RBP14.95□□□□□ -0.02
VARS-225ENST00000482996 WDR49Q8IV35 697 aa14.95□□□□□ -0.02
VARS-225ENST00000482996 RDH13Q8NBN7 331 aa14.95□□□□□ -0.02
VARS-225ENST00000482996 LEMD2Q8NC56 503 aa14.95□□□□□ -0.02
VARS-225ENST00000482996 RSAD2Q8WXG1 361 aa14.95□□□□□ -0.02
VARS-225ENST00000482996 BORCS6Q96GS4 357 aa14.95□□□□□ -0.02
VARS-225ENST00000482996 GDE1Q9NZC3 331 aa14.95□□□□□ -0.02
VARS-225ENST00000482996 ZNF318Q5VUA4 2279 aa14.94□□□□□ -0.02
VARS-225ENST00000482996 MTMR11A4FU01 709 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms