RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 K7ENP7 123 aa7.32□□□□□ -1.24
CHD6-209ENST00000482596 TRDMT1O14717 391 aaKnown RBP7.32□□□□□ -1.24
CHD6-209ENST00000482596 KLK10O43240 276 aa7.32□□□□□ -1.24
CHD6-209ENST00000482596 RANBP6O60518 1105 aaKnown RBP7.32□□□□□ -1.24
CHD6-209ENST00000482596 STAM2O75886 525 aa7.32□□□□□ -1.24
CHD6-209ENST00000482596 APPP05067 770 aa7.32□□□□□ -1.24
CHD6-209ENST00000482596 DARSP14868 501 aaKnown RBP7.32□□□□□ -1.24
CHD6-209ENST00000482596 ITGB5P18084 799 aa7.32□□□□□ -1.24
CHD6-209ENST00000482596 DPP6P42658 865 aa7.32□□□□□ -1.24
CHD6-209ENST00000482596 STAT5BP51692 787 aa7.32□□□□□ -1.24
CHD6-209ENST00000482596 PPARAQ07869 468 aa7.32□□□□□ -1.24
CHD6-209ENST00000482596 DHX9Q08211 1270 aaKnown RBP7.32□□□□□ -1.24
CHD6-209ENST00000482596 PSMD5Q16401 504 aa7.32□□□□□ -1.24
CHD6-209ENST00000482596 SKIDA1Q1XH10 827 aa7.32□□□□□ -1.24
CHD6-209ENST00000482596 PLEKHG6Q3KR16 790 aa7.32□□□□□ -1.24
CHD6-209ENST00000482596 C1QL3Q5VWW1 255 aa7.32□□□□□ -1.24
CHD6-209ENST00000482596 INO80CQ6PI98 192 aaPredicted RBP7.32□□□□□ -1.24
CHD6-209ENST00000482596 TREML4Q6UXN2 200 aa7.32□□□□□ -1.24
CHD6-209ENST00000482596 GPR65Q8IYL9 337 aa7.32□□□□□ -1.24
CHD6-209ENST00000482596 IFNL3Q8IZI9 196 aa7.32□□□□□ -1.24
CHD6-209ENST00000482596 GIMAP8Q8ND71 665 aaPredicted RBP7.32□□□□□ -1.24
CHD6-209ENST00000482596 LNX1Q8TBB1 728 aaPredicted RBP7.32□□□□□ -1.24
CHD6-209ENST00000482596 OSBP2Q969R2 916 aa7.32□□□□□ -1.24
CHD6-209ENST00000482596 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.32□□□□□ -1.242e-7■□□□□ 10.3
CHD6-209ENST00000482596 JMJD4Q9H9V9 463 aa7.32□□□□□ -1.24
CHD6-209ENST00000482596 RSAD1Q9HA92 442 aa7.32□□□□□ -1.24
CHD6-209ENST00000482596 GMIPQ9P107 970 aa7.32□□□□□ -1.24
CHD6-209ENST00000482596 CACNG4Q9UBN1 327 aa7.32□□□□□ -1.24
CHD6-209ENST00000482596 FNDC3AQ9Y2H6 1198 aaKnown RBP7.32□□□□□ -1.24
CHD6-209ENST00000482596 NUP210Q8TEM1 1887 aaPredicted RBP7.32□□□□□ -1.24
CHD6-209ENST00000482596 TMEM131Q92545 1883 aa7.32□□□□□ -1.24
CHD6-209ENST00000482596 WIPF3A6NGB9 483 aa7.31□□□□□ -1.24
CHD6-209ENST00000482596 LUC7L3O95232 432 aaKnown RBP7.31□□□□□ -1.24
CHD6-209ENST00000482596 GNAI2P04899 355 aa7.31□□□□□ -1.24
CHD6-209ENST00000482596 FAM87AP0C7U9 286 aa7.31□□□□□ -1.24
CHD6-209ENST00000482596 OR1D2P34982 312 aa7.31□□□□□ -1.24
CHD6-209ENST00000482596 PCBP4P57723 403 aaKnown RBP7.31□□□□□ -1.24
CHD6-209ENST00000482596 CREMQ03060 361 aa7.31□□□□□ -1.24
CHD6-209ENST00000482596 SRSF11Q05519 484 aaKnown RBP7.31□□□□□ -1.24
CHD6-209ENST00000482596 ZNF33AQ06730 810 aa7.31□□□□□ -1.24
CHD6-209ENST00000482596 DSC1Q08554 894 aa7.31□□□□□ -1.24
CHD6-209ENST00000482596 TEAD2Q15562 447 aa7.31□□□□□ -1.24
CHD6-209ENST00000482596 MAP7D1Q3KQU3 841 aa7.31□□□□□ -1.24
CHD6-209ENST00000482596 INTS6LQ5JSJ4 861 aaKnown RBP7.31□□□□□ -1.24
CHD6-209ENST00000482596 PDZD4Q76G19 769 aaPredicted RBP7.31□□□□□ -1.24
CHD6-209ENST00000482596 PLPPR4Q7Z2D5 763 aa7.31□□□□□ -1.24
CHD6-209ENST00000482596 SLC41A1Q8IVJ1 513 aa7.31□□□□□ -1.24
CHD6-209ENST00000482596 MEIOBQ8N635 442 aa7.31□□□□□ -1.24
CHD6-209ENST00000482596 KNL1Q8NG31 2342 aa7.31□□□□□ -1.24
CHD6-209ENST00000482596 SSH3Q8TE77 659 aa7.31□□□□□ -1.24
CHD6-209ENST00000482596 PCSK5Q92824 1860 aa7.31□□□□□ -1.24
CHD6-209ENST00000482596 TNPO1Q92973 898 aaKnown RBP7.31□□□□□ -1.24
CHD6-209ENST00000482596 BOLA2Q9H3K6 86 aa7.31□□□□□ -1.24
CHD6-209ENST00000482596 IL1RAPL2Q9NP60 686 aa7.31□□□□□ -1.24
CHD6-209ENST00000482596 GPRC5CQ9NQ84 441 aa7.31□□□□□ -1.24
CHD6-209ENST00000482596 TM7SF3Q9NS93 570 aa7.31□□□□□ -1.24
CHD6-209ENST00000482596 MIOSQ9NXC5 875 aa7.31□□□□□ -1.24
CHD6-209ENST00000482596 AKT3Q9Y243 479 aa7.31□□□□□ -1.24
CHD6-209ENST00000482596 ATRQ13535 2644 aa7.31□□□□□ -1.24
CHD6-209ENST00000482596 LRRK1Q38SD2 2015 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 VPS37CA5D8V6 355 aaPredicted RBP7.3□□□□□ -1.24
CHD6-209ENST00000482596 GCOM1H8Y6P7 765 aaPredicted RBP7.3□□□□□ -1.24
CHD6-209ENST00000482596 ZNF197O14709 1029 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 GPAA1O43292 621 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 TNFSF14O43557 240 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 DHX16O60231 1041 aaKnown RBP7.3□□□□□ -1.24
CHD6-209ENST00000482596 HBP1O60381 514 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 ZNF623O75123 536 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 MICAL2O94851 1124 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 NEFLP07196 543 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 POLR2MP0CAP2 368 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 BMP2P12643 396 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 HNF1BP35680 557 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 GALK1P51570 392 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 GPC3P51654 580 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 RAB15P59190 212 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 PSMD2Q13200 908 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 ITPRIPL2Q3MIP1 535 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 ARHGAP29Q52LW3 1261 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 SPDYCQ5MJ68 293 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 GPATCH4Q5T3I0 446 aaKnown RBP7.3□□□□□ -1.24
CHD6-209ENST00000482596 STXBP5Q5T5C0 1151 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 DBX2Q6ZNG2 339 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 RABEPKQ7Z6M1 372 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 CEP57Q86XR8 500 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 PTRH1Q86Y79 214 aaKnown RBP7.3□□□□□ -1.24
CHD6-209ENST00000482596 LRRC71Q8N4P6 559 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 HASPINQ8TF76 798 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 KCNE4Q8WWG9 221 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 EXTL1Q92935 676 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 ACDQ96AP0 544 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 SPACA7Q96KW9 195 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 AMNQ9BXJ7 453 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 SLITRK6Q9H5Y7 841 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 TMPRSS4Q9NRS4 437 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 MAP3K20Q9NYL2 800 aaKnown RBP7.3□□□□□ -1.24
CHD6-209ENST00000482596 ADAM28Q9UKQ2 775 aa7.3□□□□□ -1.24
CHD6-209ENST00000482596 NOB1Q9ULX3 412 aaKnown RBP7.3□□□□□ -1.24
CHD6-209ENST00000482596 PIN4Q9Y237 131 aaKnown RBP7.3□□□□□ -1.24
CHD6-209ENST00000482596 PLAAQ9Y263 795 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms