RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 KIAA1328Q86T90 577 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 GPBP1Q86WP2 473 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 ZC3H3Q8IXZ2 948 aaKnown RBP8.38□□□□□ -1.07
SNX13-208ENST00000482558 PPHLN1Q8NEY8 458 aaKnown RBP8.38□□□□□ -1.07
SNX13-208ENST00000482558 NEK11Q8NG66 645 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 LPAR1Q92633 364 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 CCDC42Q96M95 316 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 RHOBTB2Q9BYZ6 727 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 RANBP17Q9H2T7 1088 aaKnown RBP8.38□□□□□ -1.07
SNX13-208ENST00000482558 VCPKMTQ9H867 229 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 MRPL44Q9H9J2 332 aaKnown RBP8.38□□□□□ -1.07
SNX13-208ENST00000482558 ZBTB21Q9ULJ3 1066 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 MYO6Q9UM54 1294 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 SCN9AQ15858 1988 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 MYH7BA7E2Y1 1941 aa8.38□□□□□ -1.07
SNX13-208ENST00000482558 IQCA1LA6NCM1 817 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 FAM170BA6NMN3 283 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 YDJCA8MPS7 323 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 TRAF5O00463 557 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 EIF3DO15371 548 aaKnown RBP eCLIP8.37□□□□□ -1.07
SNX13-208ENST00000482558 SLC16A3O15427 465 aaKnown RBP8.37□□□□□ -1.07
SNX13-208ENST00000482558 ADCY3O60266 1144 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 TBCAO75347 108 aaKnown RBP8.37□□□□□ -1.07
SNX13-208ENST00000482558 LCA5LO95447 670 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 ECEL1O95672 775 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 CYP11B2P19099 503 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 CAP2P40123 477 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 CACNB3P54284 484 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 SLC12A3P55017 1021 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 SPIRE1Q08AE8 756 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 STRN3Q13033 797 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 PPP2R5CQ13362 524 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 ALCAMQ13740 583 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 NFIL3Q16649 462 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 BMT2Q1RMZ1 405 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 ERCC6LQ2NKX8 1250 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 CCDC40Q4G0X9 1142 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 FBLN7Q53RD9 439 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 C10orf76Q5T2E6 689 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 BNC2Q6ZN30 1099 aaPredicted RBP8.37□□□□□ -1.07
SNX13-208ENST00000482558 LRRC55Q6ZSA7 311 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 RSRC2Q7L4I2 434 aaKnown RBP8.37□□□□□ -1.07
SNX13-208ENST00000482558 DYMQ7RTS9 669 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 FRMD5Q7Z6J6 570 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 SPATS2Q86XZ4 545 aaKnown RBP8.37□□□□□ -1.07
SNX13-208ENST00000482558 AHI1Q8N157 1196 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 KRT222Q8N1A0 295 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 RNF10Q8N5U6 811 aaKnown RBP8.37□□□□□ -1.07
SNX13-208ENST00000482558 MSL3Q8N5Y2 521 aaKnown RBP8.37□□□□□ -1.07
SNX13-208ENST00000482558 SLC17A8Q8NDX2 589 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 TRIM58Q8NG06 486 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 GOLGA5Q8TBA6 731 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 LRRC15Q8TF66 581 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 RUBCNQ92622 972 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 TIFAQ96CG3 184 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 WDR24Q96S15 920 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 RIT2Q99578 217 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 DESI2Q9BSY9 194 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 CARD6Q9BX69 1037 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 NHEJ1Q9H9Q4 299 aaPredicted RBP8.37□□□□□ -1.07
SNX13-208ENST00000482558 LZTFL1Q9NQ48 299 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 PLCB1Q9NQ66 1216 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 OLFML3Q9NRN5 406 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 KRT82Q9NSB4 513 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 CEP72Q9P209 647 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 ZC3H7BQ9UGR2 993 aaKnown RBP8.37□□□□□ -1.07
SNX13-208ENST00000482558 POLG2Q9UHN1 485 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 TRAF3IP3Q9Y228 551 aa8.37□□□□□ -1.07
SNX13-208ENST00000482558 BZW2Q9Y6E2 419 aaKnown RBP8.37□□□□□ -1.07
SNX13-208ENST00000482558 ATP8B3O60423 1300 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 ADAMTSL1Q8N6G6 1762 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 CTAGE15A4D2H0 777 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 CCDC151A5D8V7 595 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 WDR46O15213 610 aaKnown RBP8.36□□□□□ -1.07
SNX13-208ENST00000482558 BRINP1O60477 761 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 CTAGE8P0CG41 777 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 PRLRP16471 622 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 EPS15P42566 896 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 VAV2P52735 878 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 GHRHRQ02643 423 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 GABPB1Q06547 395 aaPredicted RBP8.36□□□□□ -1.07
SNX13-208ENST00000482558 GPS2Q13227 327 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 MPP2Q14168 576 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 MAP7Q14244 749 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 MTF1Q14872 753 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 KNOP1Q1ED39 458 aaKnown RBP8.36□□□□□ -1.07
SNX13-208ENST00000482558 MINDY4Q4G0A6 757 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 SLC9C1Q4G0N8 1177 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 CCDC122Q5T0U0 273 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 MRM1Q6IN84 353 aaKnown RBP8.36□□□□□ -1.07
SNX13-208ENST00000482558 XRRA1Q6P2D8 792 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 MMS22LQ6ZRQ5 1243 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 CACNA2D4Q7Z3S7 1137 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 CTAGE6Q86UF2 777 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 CATSPER3Q86XQ3 398 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 CTAGE4Q8IX94 777 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 VPS37AQ8NEZ2 397 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 GATAD2BQ8WXI9 593 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 SLC5A5Q92911 643 aa8.36□□□□□ -1.07
SNX13-208ENST00000482558 JAKMIP2Q96AA8 810 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms