RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 MTMR12Q9C0I1 747 aa20.21■□□□□ 0.83
HSPG2-210ENST00000481644 AFF4Q9UHB7 1163 aaKnown RBP20.21■□□□□ 0.83
HSPG2-210ENST00000481644 ITGA11Q9UKX5 1188 aa20.21■□□□□ 0.83
HSPG2-210ENST00000481644 DSEQ9UL01 958 aa20.21■□□□□ 0.83
HSPG2-210ENST00000481644 AGAP1Q9UPQ3 857 aa20.21■□□□□ 0.83
HSPG2-210ENST00000481644 SORCS3Q9UPU3 1222 aa20.21■□□□□ 0.83
HSPG2-210ENST00000481644 DOCK8Q8NF50 2099 aa20.2■□□□□ 0.82
HSPG2-210ENST00000481644 PRR33A8MZF0 331 aa20.2■□□□□ 0.82
HSPG2-210ENST00000481644 KPNA7A9QM74 516 aa20.2■□□□□ 0.82
HSPG2-210ENST00000481644 SEC24AO95486 1093 aa20.2■□□□□ 0.82
HSPG2-210ENST00000481644 LRG1P02750 347 aa20.2■□□□□ 0.82
HSPG2-210ENST00000481644 CYP11A1P05108 521 aa20.2■□□□□ 0.82
HSPG2-210ENST00000481644 ASGR2P07307 311 aa20.2■□□□□ 0.82
HSPG2-210ENST00000481644 KRT19P08727 400 aa20.2■□□□□ 0.82
HSPG2-210ENST00000481644 OR4Q2P0C623 313 aa20.2■□□□□ 0.82
HSPG2-210ENST00000481644 FSHRP23945 695 aa20.2■□□□□ 0.82
HSPG2-210ENST00000481644 DPYDQ12882 1025 aa20.2■□□□□ 0.82
HSPG2-210ENST00000481644 MTMR3Q13615 1198 aa20.2■□□□□ 0.82
HSPG2-210ENST00000481644 LMBRD2Q68DH5 695 aaPredicted RBP20.2■□□□□ 0.82
HSPG2-210ENST00000481644 RNF19BQ6ZMZ0 732 aa20.2■□□□□ 0.82
HSPG2-210ENST00000481644 C12orf56Q8IXR9 622 aa20.2■□□□□ 0.82
HSPG2-210ENST00000481644 GOLGA5Q8TBA6 731 aa20.2■□□□□ 0.82
HSPG2-210ENST00000481644 MYADMQ96S97 322 aa20.2■□□□□ 0.82
HSPG2-210ENST00000481644 INTS13Q9NVM9 706 aa20.2■□□□□ 0.82
HSPG2-210ENST00000481644 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.2■□□□□ 0.82
HSPG2-210ENST00000481644 MAFFQ9ULX9 164 aa20.2■□□□□ 0.82
HSPG2-210ENST00000481644 TNNC2P02585 160 aa20.19■□□□□ 0.82
HSPG2-210ENST00000481644 RBP5P82980 135 aa20.19■□□□□ 0.82
HSPG2-210ENST00000481644 MYBPC2Q14324 1141 aa20.19■□□□□ 0.82
HSPG2-210ENST00000481644 LRRC52Q8N7C0 313 aa20.19■□□□□ 0.82
HSPG2-210ENST00000481644 BORCS6Q96GS4 357 aa20.19■□□□□ 0.82
HSPG2-210ENST00000481644 PGLYRP2Q96PD5 576 aa20.19■□□□□ 0.82
HSPG2-210ENST00000481644 HCFC1R1Q9NWW0 138 aa20.19■□□□□ 0.82
HSPG2-210ENST00000481644 R3HCC1Q9Y3T6 440 aaKnown RBP20.19■□□□□ 0.82
HSPG2-210ENST00000481644 INSL5Q9Y5Q6 135 aa20.19■□□□□ 0.82
HSPG2-210ENST00000481644 PTPRJQ12913 1337 aa20.19■□□□□ 0.82
HSPG2-210ENST00000481644 EXOC3O60645 756 aa20.18■□□□□ 0.82
HSPG2-210ENST00000481644 RHOBTB3O94955 611 aa20.18■□□□□ 0.82
HSPG2-210ENST00000481644 CYP24A1Q07973 514 aa20.18■□□□□ 0.82
HSPG2-210ENST00000481644 SIGLEC14Q08ET2 396 aa20.18■□□□□ 0.82
HSPG2-210ENST00000481644 BFSP1Q12934 665 aa20.18■□□□□ 0.82
HSPG2-210ENST00000481644 PSMD6Q15008 389 aa20.18■□□□□ 0.82
HSPG2-210ENST00000481644 DUOXA2Q1HG44 320 aa20.18■□□□□ 0.82
HSPG2-210ENST00000481644 PABPC1LQ4VXU2 614 aaKnown RBP20.18■□□□□ 0.82
HSPG2-210ENST00000481644 WSCD1Q658N2 575 aa20.18■□□□□ 0.82
HSPG2-210ENST00000481644 TRIM67Q6ZTA4 783 aa20.18■□□□□ 0.82
HSPG2-210ENST00000481644 WDR49Q8IV35 697 aa20.18■□□□□ 0.82
HSPG2-210ENST00000481644 FMR1NBQ8N0W7 255 aaPredicted RBP20.18■□□□□ 0.82
HSPG2-210ENST00000481644 OR5B17Q8NGF7 314 aa20.18■□□□□ 0.82
HSPG2-210ENST00000481644 CXorf38Q8TB03 319 aa20.18■□□□□ 0.82
HSPG2-210ENST00000481644 FNBP1Q96RU3 617 aa20.18■□□□□ 0.82
HSPG2-210ENST00000481644 EPS15L1Q9UBC2 864 aa20.18■□□□□ 0.82
HSPG2-210ENST00000481644 DNMT3BQ9UBC3 853 aaKnown RBP20.18■□□□□ 0.82
HSPG2-210ENST00000481644 SIX4Q9UIU6 781 aa20.18■□□□□ 0.82
HSPG2-210ENST00000481644 NOTCH4Q99466 2003 aa20.17■□□□□ 0.82
HSPG2-210ENST00000481644 TECTAO75443 2155 aa20.17■□□□□ 0.82
HSPG2-210ENST00000481644 KIF20AO95235 890 aa20.17■□□□□ 0.82
HSPG2-210ENST00000481644 DLATP10515 647 aaKnown RBP20.17■□□□□ 0.82
HSPG2-210ENST00000481644 TNNI1P19237 187 aa20.17■□□□□ 0.82
HSPG2-210ENST00000481644 GPR17Q13304 367 aa20.17■□□□□ 0.82
HSPG2-210ENST00000481644 UBALD2Q8IYN6 164 aa20.17■□□□□ 0.82
HSPG2-210ENST00000481644 THEM5Q8N1Q8 247 aa20.17■□□□□ 0.82
HSPG2-210ENST00000481644 OR10T2Q8NGX3 314 aa20.17■□□□□ 0.82
HSPG2-210ENST00000481644 CCDC127Q96BQ5 260 aa20.17■□□□□ 0.82
HSPG2-210ENST00000481644 TMEM209Q96SK2 561 aa20.17■□□□□ 0.82
HSPG2-210ENST00000481644 CGRRF1Q99675 332 aa20.17■□□□□ 0.82
HSPG2-210ENST00000481644 KCTD10Q9H3F6 313 aa20.17■□□□□ 0.82
HSPG2-210ENST00000481644 KCNK12Q9HB15 430 aa20.17■□□□□ 0.82
HSPG2-210ENST00000481644 CIZ1Q9ULV3 898 aaPredicted RBP20.17■□□□□ 0.82
HSPG2-210ENST00000481644 TMEM221A6NGB7 291 aa20.16■□□□□ 0.82
HSPG2-210ENST00000481644 M0R296 226 aa20.16■□□□□ 0.82
HSPG2-210ENST00000481644 PRPF40AO75400 957 aaKnown RBP20.16■□□□□ 0.82
HSPG2-210ENST00000481644 RHOP08100 348 aa20.16■□□□□ 0.82
HSPG2-210ENST00000481644 LAMP2P13473 410 aa20.16■□□□□ 0.82
HSPG2-210ENST00000481644 PTPN2P17706 415 aa20.16■□□□□ 0.82
HSPG2-210ENST00000481644 COL9A1P20849 921 aa20.16■□□□□ 0.82
HSPG2-210ENST00000481644 TWF1Q12792 350 aa20.16■□□□□ 0.82
HSPG2-210ENST00000481644 KCNB1Q14721 858 aa20.16■□□□□ 0.82
HSPG2-210ENST00000481644 SCARA3Q6AZY7 606 aa20.16■□□□□ 0.82
HSPG2-210ENST00000481644 ELMOD1Q8N336 334 aa20.16■□□□□ 0.82
HSPG2-210ENST00000481644 ITFG1Q8TB96 612 aa20.16■□□□□ 0.82
HSPG2-210ENST00000481644 IGSF9Q9P2J2 1179 aa20.16■□□□□ 0.82
HSPG2-210ENST00000481644 CDH7Q9ULB5 785 aa20.16■□□□□ 0.82
HSPG2-210ENST00000481644 ZFP37Q9Y6Q3 630 aaPredicted RBP20.16■□□□□ 0.82
HSPG2-210ENST00000481644 MTMR11A4FU01 709 aa20.15■□□□□ 0.82
HSPG2-210ENST00000481644 PDXKO00764 312 aa20.15■□□□□ 0.82
HSPG2-210ENST00000481644 HUS1O60921 280 aa20.15■□□□□ 0.82
HSPG2-210ENST00000481644 VNN2O95498 520 aa20.15■□□□□ 0.82
HSPG2-210ENST00000481644 FAM160A1Q05DH4 1040 aa20.15■□□□□ 0.82
HSPG2-210ENST00000481644 MYO1EQ12965 1108 aa20.15■□□□□ 0.82
HSPG2-210ENST00000481644 TDGQ13569 410 aa20.15■□□□□ 0.82
HSPG2-210ENST00000481644 SLC39A12Q504Y0 691 aa20.15■□□□□ 0.82
HSPG2-210ENST00000481644 HFE2Q6ZVN8 426 aa20.15■□□□□ 0.82
HSPG2-210ENST00000481644 MFSD14AQ96MC6 490 aa20.15■□□□□ 0.82
HSPG2-210ENST00000481644 RTP3Q9BQQ7 232 aa20.15■□□□□ 0.82
HSPG2-210ENST00000481644 CORO1BQ9BR76 489 aa20.15■□□□□ 0.82
HSPG2-210ENST00000481644 ZCWPW1Q9H0M4 648 aa20.15■□□□□ 0.82
HSPG2-210ENST00000481644 SMOC2Q9H3U7 446 aa20.15■□□□□ 0.82
HSPG2-210ENST00000481644 DMAC2Q9NW81 257 aa20.15■□□□□ 0.82
HSPG2-210ENST00000481644 L1RE1Q9UN81 338 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms