RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 ATP8B3O60423 1300 aa13.45□□□□□ -0.26
SIK3-209ENST00000480222 CASTOR2A6NHX0 329 aa13.45□□□□□ -0.26
SIK3-209ENST00000480222 EIF3CLB5ME19 914 aaKnown RBP13.45□□□□□ -0.26
SIK3-209ENST00000480222 HUS1O60921 280 aa13.45□□□□□ -0.26
SIK3-209ENST00000480222 CILPO75339 1184 aa13.45□□□□□ -0.26
SIK3-209ENST00000480222 TACC1O75410 805 aa13.45□□□□□ -0.26
SIK3-209ENST00000480222 NDUFA10O95299 355 aa13.45□□□□□ -0.26
SIK3-209ENST00000480222 KIF11P52732 1056 aa13.45□□□□□ -0.26
SIK3-209ENST00000480222 WDR5P61964 334 aaKnown RBP13.45□□□□□ -0.26
SIK3-209ENST00000480222 PTK2Q05397 1052 aa13.45□□□□□ -0.26
SIK3-209ENST00000480222 BMS1Q14692 1282 aaKnown RBP13.45□□□□□ -0.26
SIK3-209ENST00000480222 TMEM270Q6UE05 265 aa13.45□□□□□ -0.26
SIK3-209ENST00000480222 RAD9BQ6WBX8 426 aa13.45□□□□□ -0.26
SIK3-209ENST00000480222 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.45□□□□□ -0.26
SIK3-209ENST00000480222 LIMS2Q7Z4I7 341 aa13.45□□□□□ -0.26
SIK3-209ENST00000480222 COLGALT2Q8IYK4 626 aa13.45□□□□□ -0.26
SIK3-209ENST00000480222 APPL2Q8NEU8 664 aa13.45□□□□□ -0.26
SIK3-209ENST00000480222 ELMO3Q96BJ8 720 aa13.45□□□□□ -0.26
SIK3-209ENST00000480222 CASD1Q96PB1 797 aa13.45□□□□□ -0.26
SIK3-209ENST00000480222 FAM193BQ96PV7 902 aaPredicted RBP13.45□□□□□ -0.26
SIK3-209ENST00000480222 MMS19Q96T76 1030 aa13.45□□□□□ -0.26
SIK3-209ENST00000480222 EIF3CQ99613 913 aaKnown RBP13.45□□□□□ -0.26
SIK3-209ENST00000480222 CHP1Q99653 195 aa13.45□□□□□ -0.26
SIK3-209ENST00000480222 TMEM175Q9BSA9 504 aa13.45□□□□□ -0.26
SIK3-209ENST00000480222 HAUS4Q9H6D7 363 aa13.45□□□□□ -0.26
SIK3-209ENST00000480222 LUC7LQ9NQ29 371 aaKnown RBP13.45□□□□□ -0.26
SIK3-209ENST00000480222 BARX2Q9UMQ3 279 aaPredicted RBP13.45□□□□□ -0.26
SIK3-209ENST00000480222 EPN1Q9Y6I3 576 aaPredicted RBP13.45□□□□□ -0.26
SIK3-209ENST00000480222 RBAK-RBAKDNI3L0D1 243 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 SPTLC1O15269 473 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 CYP26A1O43174 497 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 AKR1B10O60218 316 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 DGKIO75912 1065 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 B3GAT3O94766 335 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 LCA5LO95447 670 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 PLEKP08567 350 aaPredicted RBP13.44□□□□□ -0.26
SIK3-209ENST00000480222 PAEPP09466 180 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 CCDC175P0C221 793 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 ODC1P11926 461 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 CYP11B1P15538 503 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 CD58P19256 250 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 MSNP26038 577 aaKnown RBP13.44□□□□□ -0.26
SIK3-209ENST00000480222 EIF4A3P38919 411 aaKnown RBP13.44□□□□□ -0.26
SIK3-209ENST00000480222 SLC18A3Q16572 532 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 ASTE1Q2TB18 679 aaPredicted RBP13.44□□□□□ -0.26
SIK3-209ENST00000480222 DCLRE1AQ6PJP8 1040 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 UNC93AQ86WB7 457 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 TMEM86AQ8N2M4 240 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 TMEM130Q8N3G9 435 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 TXLNBQ8N3L3 684 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 BADQ92934 168 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 TOP1MTQ969P6 601 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 SYT11Q9BT88 431 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 SDCBP2Q9H190 292 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 MTIF3Q9H2K0 278 aaKnown RBP13.44□□□□□ -0.26
SIK3-209ENST00000480222 KCND1Q9NSA2 647 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 NOCTQ9UK39 431 aaKnown RBP13.44□□□□□ -0.26
SIK3-209ENST00000480222 DSEQ9UL01 958 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 PYCARDQ9ULZ3 195 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 PTPRSQ13332 1948 aa13.44□□□□□ -0.26
SIK3-209ENST00000480222 TBKBP1A7MCY6 615 aa13.43□□□□□ -0.26
SIK3-209ENST00000480222 ZSCAN12O43309 604 aa13.43□□□□□ -0.26
SIK3-209ENST00000480222 FGBP02675 491 aa13.43□□□□□ -0.26
SIK3-209ENST00000480222 WEE2P0C1S8 567 aa13.43□□□□□ -0.26
SIK3-209ENST00000480222 GNA15P30679 374 aa13.43□□□□□ -0.26
SIK3-209ENST00000480222 CLCN1P35523 988 aa13.43□□□□□ -0.26
SIK3-209ENST00000480222 RAP1GAPP47736 663 aa13.43□□□□□ -0.26
SIK3-209ENST00000480222 KRT83P78385 493 aa13.43□□□□□ -0.26
SIK3-209ENST00000480222 CDR2Q01850 454 aa13.43□□□□□ -0.26
SIK3-209ENST00000480222 MTF1Q14872 753 aa13.43□□□□□ -0.26
SIK3-209ENST00000480222 SPA17Q15506 151 aa13.43□□□□□ -0.26
SIK3-209ENST00000480222 SOWAHAQ2M3V2 549 aa13.43□□□□□ -0.26
SIK3-209ENST00000480222 TRIM72Q6ZMU5 477 aa13.43□□□□□ -0.26
SIK3-209ENST00000480222 ZNF571Q7Z3V5 609 aaPredicted RBP13.43□□□□□ -0.26
SIK3-209ENST00000480222 SLC47A2Q86VL8 602 aa13.43□□□□□ -0.26
SIK3-209ENST00000480222 CMTR2Q8IYT2 770 aaKnown RBP13.43□□□□□ -0.26
SIK3-209ENST00000480222 ADGRF2Q8IZF7 708 aa13.43□□□□□ -0.26
SIK3-209ENST00000480222 C3orf58Q8NDZ4 430 aa13.43□□□□□ -0.26
SIK3-209ENST00000480222 KIAA1524Q8TCG1 905 aa13.43□□□□□ -0.26
SIK3-209ENST00000480222 AGPAT1Q99943 283 aa13.43□□□□□ -0.26
SIK3-209ENST00000480222 RC3H2Q9HBD1 1191 aaKnown RBP13.43□□□□□ -0.26
SIK3-209ENST00000480222 L1RE1Q9UN81 338 aa13.43□□□□□ -0.26
SIK3-209ENST00000480222 RANBP2P49792 3224 aaKnown RBP13.43□□□□□ -0.26
SIK3-209ENST00000480222 SZT2Q5T011 3432 aa13.42□□□□□ -0.26
SIK3-209ENST00000480222 GOLGA6L9A6NEM1 432 aa13.42□□□□□ -0.26
SIK3-209ENST00000480222 M0QZQ0 153 aa13.42□□□□□ -0.26
SIK3-209ENST00000480222 CYB561D2O14569 222 aa13.42□□□□□ -0.26
SIK3-209ENST00000480222 TRAPPC3O43617 180 aa13.42□□□□□ -0.26
SIK3-209ENST00000480222 DDHD2O94830 711 aa13.42□□□□□ -0.26
SIK3-209ENST00000480222 KIF4AO95239 1232 aa13.42□□□□□ -0.26
SIK3-209ENST00000480222 ACRP10323 421 aa13.42□□□□□ -0.26
SIK3-209ENST00000480222 WARSP23381 471 aaKnown RBP13.42□□□□□ -0.26
SIK3-209ENST00000480222 DEFB103AP81534 67 aa13.42□□□□□ -0.26
SIK3-209ENST00000480222 C10orf76Q5T2E6 689 aa13.42□□□□□ -0.26
SIK3-209ENST00000480222 PPP1R2P3Q6NXS1 205 aa13.42□□□□□ -0.26
SIK3-209ENST00000480222 TOGARAM2Q6ZUX3 1019 aa13.42□□□□□ -0.26
SIK3-209ENST00000480222 NOP9Q86U38 636 aaKnown RBP13.42□□□□□ -0.26
SIK3-209ENST00000480222 ZNF280BQ86YH2 543 aa13.42□□□□□ -0.26
SIK3-209ENST00000480222 GPIHBP1Q8IV16 184 aa13.42□□□□□ -0.26
SIK3-209ENST00000480222 PDCL2Q8N4E4 241 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms