RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 TOP6BLQ8N6T0 577 aa21.22■□□□□ 0.99
LIME1-205ENST00000480139 CNOT6LQ96LI5 555 aaKnown RBP21.22■□□□□ 0.99
LIME1-205ENST00000480139 NAT10Q9H0A0 1025 aaKnown RBP21.22■□□□□ 0.99
LIME1-205ENST00000480139 SYCE3A1L190 88 aa21.21■□□□□ 0.99
LIME1-205ENST00000480139 MYL6P60660 151 aa21.21■□□□□ 0.99
LIME1-205ENST00000480139 CTC1Q2NKJ3 1217 aa21.21■□□□□ 0.99
LIME1-205ENST00000480139 SGSM1Q2NKQ1 1148 aa21.21■□□□□ 0.99
LIME1-205ENST00000480139 SLC8B1Q6J4K2 584 aa21.21■□□□□ 0.99
LIME1-205ENST00000480139 ZNF280DQ6N043 979 aa21.21■□□□□ 0.99
LIME1-205ENST00000480139 RBM23Q86U06 439 aaKnown RBP21.21■□□□□ 0.99
LIME1-205ENST00000480139 TMEM86AQ8N2M4 240 aa21.21■□□□□ 0.99
LIME1-205ENST00000480139 PABPC5Q96DU9 382 aaKnown RBP21.21■□□□□ 0.99
LIME1-205ENST00000480139 BPIFA3Q9BQP9 254 aa21.21■□□□□ 0.99
LIME1-205ENST00000480139 CLSTN3Q9BQT9 956 aa21.21■□□□□ 0.99
LIME1-205ENST00000480139 DNAJC25Q9H1X3 360 aa21.21■□□□□ 0.99
LIME1-205ENST00000480139 SNX9Q9Y5X1 595 aa21.21■□□□□ 0.99
LIME1-205ENST00000480139 PLXNA3P51805 1871 aa21.2■□□□□ 0.98
LIME1-205ENST00000480139 PER2O15055 1255 aa21.2■□□□□ 0.98
LIME1-205ENST00000480139 HUS1O60921 280 aa21.2■□□□□ 0.98
LIME1-205ENST00000480139 N4BP1O75113 896 aaKnown RBP21.2■□□□□ 0.98
LIME1-205ENST00000480139 ASS1P00966 412 aaKnown RBP21.2■□□□□ 0.98
LIME1-205ENST00000480139 HLA-DRAP01903 254 aa21.2■□□□□ 0.98
LIME1-205ENST00000480139 PIK3CAP42336 1068 aa21.2■□□□□ 0.98
LIME1-205ENST00000480139 CCDC85BQ15834 202 aaPredicted RBP21.2■□□□□ 0.98
LIME1-205ENST00000480139 ZSCAN23Q3MJ62 389 aa21.2■□□□□ 0.98
LIME1-205ENST00000480139 OVOS1Q6IE37 1185 aa21.2■□□□□ 0.98
LIME1-205ENST00000480139 TMEM184AQ6ZMB5 413 aa21.2■□□□□ 0.98
LIME1-205ENST00000480139 FBXL13Q8NEE6 735 aa21.2■□□□□ 0.98
LIME1-205ENST00000480139 TAS1R2Q8TE23 839 aa21.2■□□□□ 0.98
LIME1-205ENST00000480139 COQ4Q9Y3A0 265 aa21.2■□□□□ 0.98
LIME1-205ENST00000480139 NFE2L3Q9Y4A8 694 aa21.2■□□□□ 0.98
LIME1-205ENST00000480139 REV3LO60673 3130 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 P4HA2O15460 535 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 FAM163BP0C2L3 166 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 KLRC2P26717 231 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 GTF2F1P35269 517 aaKnown RBP eCLIP21.19■□□□□ 0.98
LIME1-205ENST00000480139 FMO5P49326 533 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 CLCN4P51793 760 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 MYL5Q02045 173 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 ADAM15Q13444 863 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 ZNF699Q32M78 642 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 WDR72Q3MJ13 1102 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 ANO6Q4KMQ2 910 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 CTXN3Q4LDR2 81 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 CBWD6Q4V339 395 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 CBWD3Q5JTY5 395 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 CBWD5Q5RIA9 395 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 METTL23Q86XA0 190 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 PDCL2Q8N4E4 241 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 SLC22A17Q8WUG5 538 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 IMPG2Q9BZV3 1241 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 MMRN2Q9H8L6 949 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 FBXL5Q9UKA1 691 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 L1RE1Q9UN81 338 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.19■□□□□ 0.98
LIME1-205ENST00000480139 TIMM13Q9Y5L4 95 aaPredicted RBP21.19■□□□□ 0.98
LIME1-205ENST00000480139 HCFC2Q9Y5Z7 792 aa21.19■□□□□ 0.98
LIME1-205ENST00000480139 OR6C75A6NL08 312 aa21.18■□□□□ 0.98
LIME1-205ENST00000480139 SRGAP2BP0DMP2 458 aa21.18■□□□□ 0.98
LIME1-205ENST00000480139 RPL17P18621 184 aaKnown RBP21.18■□□□□ 0.98
LIME1-205ENST00000480139 TNNC1P63316 161 aa21.18■□□□□ 0.98
LIME1-205ENST00000480139 RAB33AQ14088 237 aa21.18■□□□□ 0.98
LIME1-205ENST00000480139 SOWAHAQ2M3V2 549 aa21.18■□□□□ 0.98
LIME1-205ENST00000480139 ZNF667Q5HYK9 610 aa21.18■□□□□ 0.98
LIME1-205ENST00000480139 WSCD1Q658N2 575 aa21.18■□□□□ 0.98
LIME1-205ENST00000480139 FAXDC2Q96IV6 333 aa21.18■□□□□ 0.98
LIME1-205ENST00000480139 IGFLR1Q9H665 355 aa21.18■□□□□ 0.98
LIME1-205ENST00000480139 RAB20Q9NX57 234 aa21.18■□□□□ 0.98
LIME1-205ENST00000480139 MAGEC2Q9UBF1 373 aaPredicted RBP21.18■□□□□ 0.98
LIME1-205ENST00000480139 CDY1Q9Y6F8 540 aa21.18■□□□□ 0.98
LIME1-205ENST00000480139 MTCL1Q9Y4B5 1905 aaKnown RBP21.17■□□□□ 0.98
LIME1-205ENST00000480139 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.17■□□□□ 0.98
LIME1-205ENST00000480139 TACC1O75410 805 aa21.17■□□□□ 0.98
LIME1-205ENST00000480139 GLP2RO95838 553 aa21.17■□□□□ 0.98
LIME1-205ENST00000480139 AFPP02771 609 aaKnown RBP21.17■□□□□ 0.98
LIME1-205ENST00000480139 P4HA1P13674 534 aa21.17■□□□□ 0.98
LIME1-205ENST00000480139 EEF1GP26641 437 aaKnown RBP21.17■□□□□ 0.98
LIME1-205ENST00000480139 OR1D2P34982 312 aa21.17■□□□□ 0.98
LIME1-205ENST00000480139 KCNH2Q12809 1159 aa21.17■□□□□ 0.98
LIME1-205ENST00000480139 CDKAL1Q5VV42 579 aa21.17■□□□□ 0.98
LIME1-205ENST00000480139 LILRA6Q6PI73 481 aa21.17■□□□□ 0.98
LIME1-205ENST00000480139 RSPO2Q6UXX9 243 aaPredicted RBP21.17■□□□□ 0.98
LIME1-205ENST00000480139 THEM5Q8N1Q8 247 aa21.17■□□□□ 0.98
LIME1-205ENST00000480139 CCDC150Q8NCX0 1101 aa21.17■□□□□ 0.98
LIME1-205ENST00000480139 VN1R2Q8NFZ6 395 aa21.17■□□□□ 0.98
LIME1-205ENST00000480139 HDAC7Q8WUI4 952 aa21.17■□□□□ 0.98
LIME1-205ENST00000480139 PPM1EQ8WY54 764 aa21.17■□□□□ 0.98
LIME1-205ENST00000480139 CASP10Q92851 521 aa21.17■□□□□ 0.98
LIME1-205ENST00000480139 SAMSN1Q9NSI8 373 aaKnown RBP21.17■□□□□ 0.98
LIME1-205ENST00000480139 DPP7Q9UHL4 492 aa21.17■□□□□ 0.98
LIME1-205ENST00000480139 COG5Q9UP83 839 aa21.17■□□□□ 0.98
LIME1-205ENST00000480139 GABRDO14764 452 aa21.16■□□□□ 0.98
LIME1-205ENST00000480139 LINC01565O15544 149 aa21.16■□□□□ 0.98
LIME1-205ENST00000480139 ADAM12O43184 909 aa21.16■□□□□ 0.98
LIME1-205ENST00000480139 CAVIN2O95810 425 aa21.16■□□□□ 0.98
LIME1-205ENST00000480139 GLUD1P00367 558 aa21.16■□□□□ 0.98
LIME1-205ENST00000480139 PRKCSHP14314 528 aaPredicted RBP21.16■□□□□ 0.98
LIME1-205ENST00000480139 LHX1P48742 406 aa21.16■□□□□ 0.98
LIME1-205ENST00000480139 MYL7Q01449 175 aa21.16■□□□□ 0.98
LIME1-205ENST00000480139 CETN1Q12798 172 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms