RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 SPIRE2Q8WWL2 714 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 CDK5RAP3Q96JB5 506 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 TIMMDC1Q9NPL8 285 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 ARHGEF38Q9NXL2 777 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 ITGB1BP2Q9UKP3 347 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 TMEM98Q9Y2Y6 226 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 CDH16O75309 829 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 OR6B1O95007 311 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 TTC4O95801 387 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 HARSP12081 509 aaKnown RBP11.48□□□□□ -0.57
CHD6-208ENST00000480022 ACTN1P12814 892 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 ANPEPP15144 967 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 CTNNA2P26232 953 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 TXKP42681 527 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 NOVP48745 357 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 PPATQ06203 517 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 CDC16Q13042 620 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 DCTN2Q13561 401 aaKnown RBP11.48□□□□□ -0.57
CHD6-208ENST00000480022 SPARCL1Q14515 664 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 SH3D19Q5HYK7 790 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 CCDC105Q8IYK2 499 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 RFFLQ8WZ73 363 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 MPHOSPH6Q99547 160 aaKnown RBP11.48□□□□□ -0.57
CHD6-208ENST00000480022 ELP3Q9H9T3 547 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 UBN1Q9NPG3 1134 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 INIPQ9NRY2 104 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 TBCCD1Q9NVR7 557 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 DDX25Q9UHL0 483 aaKnown RBP11.48□□□□□ -0.57
CHD6-208ENST00000480022 NAALADL1Q9UQQ1 740 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 NCANO14594 1321 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 TRIM43BA6NCK2 446 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 UNCXA6NJT0 531 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 HAUS5O94927 633 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 PIM1P11309 404 aaPredicted RBP11.47□□□□□ -0.57
CHD6-208ENST00000480022 CDK4P11802 303 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 UCHL3P15374 230 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 MARSP56192 900 aaKnown RBP11.47□□□□□ -0.57
CHD6-208ENST00000480022 KYNUQ16719 465 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 TMEM266Q2M3C6 531 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 ARHGAP24Q8N264 748 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 ARL10Q8N8L6 244 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 GLIS3Q8NEA6 775 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 ALG3Q92685 438 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 PTCD3Q96EY7 689 aaKnown RBP11.47□□□□□ -0.57
CHD6-208ENST00000480022 NSL1Q96IY1 281 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 AGAP3Q96P47 875 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 POLR3CQ9BUI4 534 aaPredicted RBP11.47□□□□□ -0.57
CHD6-208ENST00000480022 AAASQ9NRG9 546 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 ARL8BQ9NVJ2 186 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 NDE1Q9NXR1 346 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 ZNF148Q9UQR1 794 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 ZNF711Q9Y462 761 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 TMEM88BA6NKF7 163 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 USP17L5A8MUK1 530 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 RASA4BC9J798 803 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 MAGEB3O15480 346 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 RASA4O43374 803 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 STK10O94804 968 aaKnown RBP11.47□□□□□ -0.57
CHD6-208ENST00000480022 EEF2P13639 858 aaKnown RBP11.47□□□□□ -0.57
CHD6-208ENST00000480022 GSTM4Q03013 218 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 PDK4Q16654 411 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 FYB2Q5VWT5 728 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 SAPCD2Q86UD0 394 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 ZNF398Q8TD17 642 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 GFM2Q969S9 779 aaKnown RBP11.47□□□□□ -0.57
CHD6-208ENST00000480022 EBF3Q9H4W6 596 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 SH3GLB2Q9NR46 395 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 TMOD4Q9NZQ9 345 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 PCDHA6Q9UN73 950 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 STX8Q9UNK0 236 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 PTPN22Q9Y2R2 807 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 PCDHA8Q9Y5H6 950 aa11.47□□□□□ -0.57
CHD6-208ENST00000480022 CFAP69A5D8W1 941 aa11.46□□□□□ -0.57
CHD6-208ENST00000480022 F8W8V4 182 aa11.46□□□□□ -0.57
CHD6-208ENST00000480022 M0R2N6 131 aa11.46□□□□□ -0.57
CHD6-208ENST00000480022 BIRC5O15392 142 aa11.46□□□□□ -0.57
CHD6-208ENST00000480022 HOXD12P35452 270 aa11.46□□□□□ -0.57
CHD6-208ENST00000480022 EMP3P54852 163 aa11.46□□□□□ -0.57
CHD6-208ENST00000480022 HUNKP57058 714 aa11.46□□□□□ -0.57
CHD6-208ENST00000480022 KCNH2Q12809 1159 aa11.46□□□□□ -0.57
CHD6-208ENST00000480022 MED21Q13503 144 aa11.46□□□□□ -0.57
CHD6-208ENST00000480022 HNRNPDQ14103 355 aaKnown RBP11.46□□□□□ -0.57
CHD6-208ENST00000480022 GRM2Q14416 872 aa11.46□□□□□ -0.57
CHD6-208ENST00000480022 AADACL2Q6P093 401 aa11.46□□□□□ -0.57
CHD6-208ENST00000480022 DGKHQ86XP1 1220 aa11.46□□□□□ -0.57
CHD6-208ENST00000480022 SLC15A3Q8IY34 581 aa11.46□□□□□ -0.57
CHD6-208ENST00000480022 GAB3Q8WWW8 586 aa11.46□□□□□ -0.57
CHD6-208ENST00000480022 GPKOWQ92917 476 aaPredicted RBP eCLIP11.46□□□□□ -0.57
CHD6-208ENST00000480022 ABHD8Q96I13 439 aa11.46□□□□□ -0.57
CHD6-208ENST00000480022 FAM81BQ96LP2 452 aa11.46□□□□□ -0.57
CHD6-208ENST00000480022 CYLDQ9NQC7 956 aa11.46□□□□□ -0.57
CHD6-208ENST00000480022 BLOC1S4Q9NUP1 217 aa11.46□□□□□ -0.57
CHD6-208ENST00000480022 NYAP2Q9P242 653 aa11.46□□□□□ -0.57
CHD6-208ENST00000480022 STK17AQ9UEE5 414 aa11.46□□□□□ -0.57
CHD6-208ENST00000480022 ZHX2Q9Y6X8 837 aa11.46□□□□□ -0.57
CHD6-208ENST00000480022 TMEM247A6NEH6 219 aa11.46□□□□□ -0.58
CHD6-208ENST00000480022 THAP12O43422 761 aa11.46□□□□□ -0.58
CHD6-208ENST00000480022 GGPS1O95749 300 aa11.46□□□□□ -0.58
CHD6-208ENST00000480022 GAS8O95995 478 aa11.46□□□□□ -0.58
CHD6-208ENST00000480022 TMEM253P0C7T8 217 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 189.8 ms