RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 C7orf25Q9BPX7 421 aa16.27■□□□□ 0.2
PRKN-207ENST00000479615 ARHGEF3Q9NR81 526 aa16.27■□□□□ 0.2
PRKN-207ENST00000479615 RBAKQ9NYW8 714 aaPredicted RBP16.27■□□□□ 0.2
PRKN-207ENST00000479615 R3HCC1Q9Y3T6 440 aaKnown RBP16.27■□□□□ 0.2
PRKN-207ENST00000479615 TIMM13Q9Y5L4 95 aaPredicted RBP16.27■□□□□ 0.2
PRKN-207ENST00000479615 KPNA7A9QM74 516 aa16.26■□□□□ 0.19
PRKN-207ENST00000479615 TISP43B9A030 160 aa16.26■□□□□ 0.19
PRKN-207ENST00000479615 CYB561D2O14569 222 aa16.26■□□□□ 0.19
PRKN-207ENST00000479615 ME1P48163 572 aa16.26■□□□□ 0.19
PRKN-207ENST00000479615 MRE11P49959 708 aa16.26■□□□□ 0.19
PRKN-207ENST00000479615 GUCY2FP51841 1108 aa16.26■□□□□ 0.19
PRKN-207ENST00000479615 KCNA1Q09470 495 aa16.26■□□□□ 0.19
PRKN-207ENST00000479615 PRSS36Q5K4E3 855 aa16.26■□□□□ 0.19
PRKN-207ENST00000479615 CWF19L1Q69YN2 538 aaKnown RBP16.26■□□□□ 0.19
PRKN-207ENST00000479615 CENPPQ6IPU0 288 aa16.26■□□□□ 0.19
PRKN-207ENST00000479615 SHC4Q6S5L8 630 aa16.26■□□□□ 0.19
PRKN-207ENST00000479615 ITIH5Q86UX2 942 aa16.26■□□□□ 0.19
PRKN-207ENST00000479615 ALYREFQ86V81 257 aaKnown RBP16.26■□□□□ 0.19
PRKN-207ENST00000479615 GPD1LQ8N335 351 aa16.26■□□□□ 0.19
PRKN-207ENST00000479615 SPATA18Q8TC71 538 aa16.26■□□□□ 0.19
PRKN-207ENST00000479615 E2F7Q96AV8 911 aa16.26■□□□□ 0.19
PRKN-207ENST00000479615 DHX58Q96C10 678 aa16.26■□□□□ 0.19
PRKN-207ENST00000479615 ZFP14Q9HCL3 533 aa16.26■□□□□ 0.19
PRKN-207ENST00000479615 ITGA11Q9UKX5 1188 aa16.26■□□□□ 0.19
PRKN-207ENST00000479615 YIPF1Q9Y548 306 aa16.26■□□□□ 0.19
PRKN-207ENST00000479615 UBE4BO95155 1302 aa16.25■□□□□ 0.19
PRKN-207ENST00000479615 PVALEFA0A1B0GWK0 134 aa16.25■□□□□ 0.19
PRKN-207ENST00000479615 KRBA1A5PL33 1030 aa16.25■□□□□ 0.19
PRKN-207ENST00000479615 ZNF233A6NK53 670 aa16.25■□□□□ 0.19
PRKN-207ENST00000479615 SPTLC1O15269 473 aa16.25■□□□□ 0.19
PRKN-207ENST00000479615 CASP5P51878 434 aa16.25■□□□□ 0.19
PRKN-207ENST00000479615 STARD6P59095 220 aa16.25■□□□□ 0.19
PRKN-207ENST00000479615 GPC5P78333 572 aa16.25■□□□□ 0.19
PRKN-207ENST00000479615 ASIC1P78348 528 aa16.25■□□□□ 0.19
PRKN-207ENST00000479615 TFAMQ00059 246 aaKnown RBP16.25■□□□□ 0.19
PRKN-207ENST00000479615 DUSP4Q13115 394 aa16.25■□□□□ 0.19
PRKN-207ENST00000479615 SLC5A9Q2M3M2 681 aa16.25■□□□□ 0.19
PRKN-207ENST00000479615 CCDC105Q8IYK2 499 aa16.25■□□□□ 0.19
PRKN-207ENST00000479615 DCP1BQ8IZD4 617 aaKnown RBP16.25■□□□□ 0.19
PRKN-207ENST00000479615 LRRC52Q8N7C0 313 aa16.25■□□□□ 0.19
PRKN-207ENST00000479615 MCRS1Q96EZ8 462 aa16.25■□□□□ 0.19
PRKN-207ENST00000479615 NELL2Q99435 816 aa16.25■□□□□ 0.19
PRKN-207ENST00000479615 TBC1D17Q9HA65 648 aa16.25■□□□□ 0.19
PRKN-207ENST00000479615 CEP72Q9P209 647 aa16.25■□□□□ 0.19
PRKN-207ENST00000479615 CGNQ9P2M7 1197 aaKnown RBP16.25■□□□□ 0.19
PRKN-207ENST00000479615 RCOR1Q9UKL0 485 aa16.25■□□□□ 0.19
PRKN-207ENST00000479615 CA14Q9ULX7 337 aa16.25■□□□□ 0.19
PRKN-207ENST00000479615 SIT1Q9Y3P8 196 aa16.25■□□□□ 0.19
PRKN-207ENST00000479615 DOCK8Q8NF50 2099 aa16.25■□□□□ 0.19
PRKN-207ENST00000479615 PDCD11Q14690 1871 aaKnown RBP16.25■□□□□ 0.19
PRKN-207ENST00000479615 PPEF2O14830 753 aa16.24■□□□□ 0.19
PRKN-207ENST00000479615 POLR2DO15514 142 aaKnown RBP16.24■□□□□ 0.19
PRKN-207ENST00000479615 PRPF6O94906 941 aaKnown RBP16.24■□□□□ 0.19
PRKN-207ENST00000479615 RBP5P82980 135 aa16.24■□□□□ 0.19
PRKN-207ENST00000479615 FAM26FQ5R3K3 315 aa16.24■□□□□ 0.19
PRKN-207ENST00000479615 RESP18Q5W5W9 173 aa16.24■□□□□ 0.19
PRKN-207ENST00000479615 UNC13DQ70J99 1090 aa16.24■□□□□ 0.19
PRKN-207ENST00000479615 EFCAB13Q8IY85 973 aa16.24■□□□□ 0.19
PRKN-207ENST00000479615 CEP57L1Q8IYX8 460 aa16.24■□□□□ 0.19
PRKN-207ENST00000479615 TMEM86AQ8N2M4 240 aa16.24■□□□□ 0.19
PRKN-207ENST00000479615 DTWD2Q8NBA8 298 aa16.24■□□□□ 0.19
PRKN-207ENST00000479615 ZNF507Q8TCN5 953 aa16.24■□□□□ 0.19
PRKN-207ENST00000479615 SPPL2BQ8TCT7 592 aa16.24■□□□□ 0.19
PRKN-207ENST00000479615 ING5Q8WYH8 240 aa16.24■□□□□ 0.19
PRKN-207ENST00000479615 DNASE1L2Q92874 299 aa16.24■□□□□ 0.19
PRKN-207ENST00000479615 SMARCD2Q92925 531 aa16.24■□□□□ 0.19
PRKN-207ENST00000479615 SAAL1Q96ER3 474 aa16.24■□□□□ 0.19
PRKN-207ENST00000479615 CBWD1Q9BRT8 395 aa16.24■□□□□ 0.19
PRKN-207ENST00000479615 RPP25Q9BUL9 199 aaKnown RBP16.24■□□□□ 0.19
PRKN-207ENST00000479615 OSBPL6Q9BZF3 934 aa16.24■□□□□ 0.19
PRKN-207ENST00000479615 ZCWPW1Q9H0M4 648 aa16.24■□□□□ 0.19
PRKN-207ENST00000479615 TRPV4Q9HBA0 871 aa16.24■□□□□ 0.19
PRKN-207ENST00000479615 ZMYM5Q9UJ78 669 aa16.24■□□□□ 0.19
PRKN-207ENST00000479615 PCDHA7Q9UN72 937 aa16.24■□□□□ 0.19
PRKN-207ENST00000479615 ATP6V1DQ9Y5K8 247 aa16.24■□□□□ 0.19
PRKN-207ENST00000479615 MTMR11A4FU01 709 aa16.23■□□□□ 0.19
PRKN-207ENST00000479615 PROB1E7EW31 1015 aa16.23■□□□□ 0.19
PRKN-207ENST00000479615 H0Y858 1186 aa16.23■□□□□ 0.19
PRKN-207ENST00000479615 CEBPBP17676 345 aa16.23■□□□□ 0.19
PRKN-207ENST00000479615 MAGEA9P43362 315 aa16.23■□□□□ 0.19
PRKN-207ENST00000479615 MYO1EQ12965 1108 aa16.23■□□□□ 0.19
PRKN-207ENST00000479615 VEPH1Q14D04 833 aa16.23■□□□□ 0.19
PRKN-207ENST00000479615 NFE2Q16621 373 aaPredicted RBP16.23■□□□□ 0.19
PRKN-207ENST00000479615 SLC44A4Q53GD3 710 aa16.23■□□□□ 0.19
PRKN-207ENST00000479615 FOXD4L5Q5VV16 416 aaPredicted RBP16.23■□□□□ 0.19
PRKN-207ENST00000479615 DEPDC1BQ8WUY9 529 aa16.23■□□□□ 0.19
PRKN-207ENST00000479615 FOXD4L4Q8WXT5 416 aaPredicted RBP16.23■□□□□ 0.19
PRKN-207ENST00000479615 PSMG2Q969U7 264 aa16.23■□□□□ 0.19
PRKN-207ENST00000479615 BORCS6Q96GS4 357 aa16.23■□□□□ 0.19
PRKN-207ENST00000479615 ANKRD36BP1Q96IX9 119 aa16.23■□□□□ 0.19
PRKN-207ENST00000479615 ASB16Q96NS5 453 aa16.23■□□□□ 0.19
PRKN-207ENST00000479615 PGLYRP2Q96PD5 576 aa16.23■□□□□ 0.19
PRKN-207ENST00000479615 TRPV5Q9NQA5 729 aa16.23■□□□□ 0.19
PRKN-207ENST00000479615 GDAP2Q9NXN4 497 aa16.23■□□□□ 0.19
PRKN-207ENST00000479615 USP25Q9UHP3 1055 aa16.23■□□□□ 0.19
PRKN-207ENST00000479615 MRPS17Q9Y2R5 130 aaKnown RBP16.23■□□□□ 0.19
PRKN-207ENST00000479615 KMT2EQ8IZD2 1858 aa16.22■□□□□ 0.19
PRKN-207ENST00000479615 KANSL1LA0AUZ9 987 aa16.22■□□□□ 0.19
PRKN-207ENST00000479615 NCAM2O15394 837 aa16.22■□□□□ 0.19
PRKN-207ENST00000479615 PI15O43692 258 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms