RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 TBC1D1Q86TI0 1168 aaPredicted RBP11.46□□□□□ -0.57
VPS52-217ENST00000478934 WDTC1Q8N5D0 677 aa11.46□□□□□ -0.57
VPS52-217ENST00000478934 ATL2Q8NHH9 583 aa11.46□□□□□ -0.57
VPS52-217ENST00000478934 TCP11Q8WWU5 503 aa11.46□□□□□ -0.57
VPS52-217ENST00000478934 PPP1R16BQ96T49 567 aa11.46□□□□□ -0.57
VPS52-217ENST00000478934 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.46□□□□□ -0.57
VPS52-217ENST00000478934 TPX2Q9ULW0 747 aaKnown RBP11.46□□□□□ -0.57
VPS52-217ENST00000478934 AGAP1Q9UPQ3 857 aa11.46□□□□□ -0.57
VPS52-217ENST00000478934 PARP14Q460N5 1801 aa11.46□□□□□ -0.57
VPS52-217ENST00000478934 B4GALT5O43286 388 aa11.46□□□□□ -0.58
VPS52-217ENST00000478934 DKC1O60832 514 aaKnown RBP eCLIP11.46□□□□□ -0.58
VPS52-217ENST00000478934 ATG7O95352 703 aa11.46□□□□□ -0.58
VPS52-217ENST00000478934 TTC4O95801 387 aa11.46□□□□□ -0.58
VPS52-217ENST00000478934 ITIH2P19823 946 aa11.46□□□□□ -0.58
VPS52-217ENST00000478934 RPS12P25398 132 aaKnown RBP11.46□□□□□ -0.58
VPS52-217ENST00000478934 TCF7P36402 384 aaPredicted RBP11.46□□□□□ -0.58
VPS52-217ENST00000478934 ALDH5A1P51649 535 aaPredicted RBP11.46□□□□□ -0.58
VPS52-217ENST00000478934 OAZ1P54368 228 aa11.46□□□□□ -0.58
VPS52-217ENST00000478934 FASTKD3Q14CZ7 662 aaKnown RBP11.46□□□□□ -0.58
VPS52-217ENST00000478934 IZUMO3Q5VZ72 239 aa11.46□□□□□ -0.58
VPS52-217ENST00000478934 PLEKHA7Q6IQ23 1121 aa11.46□□□□□ -0.58
VPS52-217ENST00000478934 NCAPG2Q86XI2 1143 aa11.46□□□□□ -0.58
VPS52-217ENST00000478934 RHOT1Q8IXI2 618 aa11.46□□□□□ -0.58
VPS52-217ENST00000478934 PARP9Q8IXQ6 854 aa11.46□□□□□ -0.58
VPS52-217ENST00000478934 TMEM192Q8IY95 271 aa11.46□□□□□ -0.58
VPS52-217ENST00000478934 THNSL1Q8IYQ7 743 aa11.46□□□□□ -0.58
VPS52-217ENST00000478934 CDHR1Q96JP9 859 aa11.46□□□□□ -0.58
VPS52-217ENST00000478934 C12orf42Q96LP6 360 aa11.46□□□□□ -0.58
VPS52-217ENST00000478934 CGRRF1Q99675 332 aa11.46□□□□□ -0.58
VPS52-217ENST00000478934 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.46□□□□□ -0.58
VPS52-217ENST00000478934 ARID2Q68CP9 1835 aa11.46□□□□□ -0.58
VPS52-217ENST00000478934 SRRM3A6NNA2 597 aaPredicted RBP11.45□□□□□ -0.58
VPS52-217ENST00000478934 STAT5BP51692 787 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 TFAMQ00059 246 aaKnown RBP11.45□□□□□ -0.58
VPS52-217ENST00000478934 GAD2Q05329 585 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 HSDL1Q3SXM5 330 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 LIN9Q5TKA1 542 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 NUGGCQ68CJ6 796 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 PNMA8AQ86V59 439 aaPredicted RBP11.45□□□□□ -0.58
VPS52-217ENST00000478934 SRRM1Q8IYB3 904 aaKnown RBP11.45□□□□□ -0.58
VPS52-217ENST00000478934 FEZF2Q8TBJ5 459 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 SLCO2A1Q92959 643 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 PAIP2Q9BPZ3 127 aaKnown RBP11.45□□□□□ -0.58
VPS52-217ENST00000478934 HOXC10Q9NYD6 342 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 SAMD15Q9P1V8 674 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 GGA2Q9UJY4 613 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 POLIQ9UNA4 740 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.45□□□□□ -0.58
VPS52-217ENST00000478934 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.45□□□□□ -0.58
VPS52-217ENST00000478934 PHIPQ8WWQ0 1821 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 SSC5DA1L4H1 1573 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 GOLGA8SH3BPF8 625 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 GOLGA8MH3BSY2 632 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 FZD9O00144 591 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 ADCY3O60266 1144 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 FAM189A1O60320 539 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 SLC1A1P43005 524 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 CDH8P55286 799 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 BPIFB4P59827 614 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 DYNLT1P63172 113 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 NFX1Q12986 1120 aaKnown RBP11.45□□□□□ -0.58
VPS52-217ENST00000478934 SMTNL2Q2TAL5 461 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 KCNT1Q5JUK3 1230 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 ZNF365Q70YC5 407 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 TRMT10CQ7L0Y3 403 aaKnown RBP11.45□□□□□ -0.58
VPS52-217ENST00000478934 ZNF677Q86XU0 584 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 RNF149Q8NC42 400 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 COPS5Q92905 334 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 CENPTQ96BT3 561 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 PLVAPQ9BX97 442 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 KIAA1586Q9HCI6 787 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 BAIAP2L1Q9UHR4 511 aa11.45□□□□□ -0.58
VPS52-217ENST00000478934 C19orf81C9J6K1 198 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 ATP2A1O14983 1001 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 MSCO60682 206 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 USP2O75604 605 aaPredicted RBP11.44□□□□□ -0.58
VPS52-217ENST00000478934 UBOX5O94941 541 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 GAS8O95995 478 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 MYBL1P10243 752 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 MMP8P22894 467 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 GBP1P32455 592 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 NRLP54845 237 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 VGLL4Q14135 290 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 TARBP2Q15633 366 aaKnown RBP11.44□□□□□ -0.58
VPS52-217ENST00000478934 GPAT2Q6NUI2 795 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 MOB2Q70IA6 237 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 PIGWQ7Z7B1 504 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 PHF13Q86YI8 300 aaPredicted RBP11.44□□□□□ -0.58
VPS52-217ENST00000478934 KIF2BQ8N4N8 673 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 ANKS4BQ8N8V4 417 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.44□□□□□ -0.58
VPS52-217ENST00000478934 TMEM109Q9BVC6 243 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 ACTR5Q9H9F9 607 aaPredicted RBP11.44□□□□□ -0.58
VPS52-217ENST00000478934 CISHQ9NSE2 258 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 GINM1Q9NU53 330 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 NXF1Q9UBU9 619 aaKnown RBP11.44□□□□□ -0.58
VPS52-217ENST00000478934 PNMA3Q9UL41 463 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 TRIM33Q9UPN9 1127 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 NAALADL1Q9UQQ1 740 aa11.44□□□□□ -0.58
VPS52-217ENST00000478934 LCTP09848 1927 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms