RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 AOPEPQ8N6M6 819 aa6.12□□□□□ -1.43
UPF3B-203ENST00000478840 DNAJC5GQ8N7S2 189 aa6.12□□□□□ -1.43
UPF3B-203ENST00000478840 OBP2BQ9NPH6 170 aa6.12□□□□□ -1.43
UPF3B-203ENST00000478840 TERF2IPQ9NYB0 399 aa6.12□□□□□ -1.43
UPF3B-203ENST00000478840 DACT1Q9NYF0 836 aa6.12□□□□□ -1.43
UPF3B-203ENST00000478840 GRHPRQ9UBQ7 328 aa6.12□□□□□ -1.43
UPF3B-203ENST00000478840 CAPN11Q9UMQ6 739 aa6.12□□□□□ -1.43
UPF3B-203ENST00000478840 LRRFIP2Q9Y608 721 aaKnown RBP6.12□□□□□ -1.43
UPF3B-203ENST00000478840 SLC4A7Q9Y6M7 1214 aa6.12□□□□□ -1.43
UPF3B-203ENST00000478840 LGALS16A8MUM7 142 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 PRRT4C9JH25 899 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 ACKR2O00590 384 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 POMCP01189 267 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 A1BGP04217 495 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 IL1R2P27930 398 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 GABRB3P28472 473 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 UCP3P55916 312 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 SPARCL1Q14515 664 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 RAB30Q15771 203 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 DCAF12L1Q5VU92 463 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 MCTP2Q6DN12 878 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 TANGO2Q6ICL3 276 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 DOK3Q7L591 496 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 GPRIN1Q7Z2K8 1008 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 FAM71BQ8TC56 605 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 ADAMTS17Q8TE56 1095 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 MUL1Q969V5 352 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 EID2BQ96D98 161 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 SPATA5L1Q9BVQ7 753 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 MAGEB5Q9BZ81 275 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 TINAGL1Q9GZM7 467 aaPredicted RBP6.11□□□□□ -1.43
UPF3B-203ENST00000478840 SIK2Q9H0K1 926 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 PDP2Q9P2J9 529 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 ZNF212Q9UDV6 495 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 NR2E1Q9Y466 385 aa6.11□□□□□ -1.43
UPF3B-203ENST00000478840 A0A1B0GVC2 190 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 FAM234BA2RU67 622 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 TBKBP1A7MCY6 615 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 ETV2O00321 342 aaPredicted RBP6.1□□□□□ -1.43
UPF3B-203ENST00000478840 MATN2O00339 956 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 FFAR3O14843 346 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 GRPP07492 148 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 ITGA5P08648 1049 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 PIM1P11309 404 aaPredicted RBP6.1□□□□□ -1.43
UPF3B-203ENST00000478840 DDIT3P35638 169 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 COPAP53621 1224 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 ITGA8P53708 1063 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 WNT3P56703 355 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 GRM1Q13255 1194 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 PRKG1Q13976 671 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 SSPNQ14714 243 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 UBXN2BQ14CS0 331 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 ARL6IP4Q66PJ3 421 aaKnown RBP6.1□□□□□ -1.43
UPF3B-203ENST00000478840 GGT6Q6P531 493 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 USP17L6PQ6QN14 398 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 UBE3BQ7Z3V4 1068 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 PPP1R32Q7Z5V6 425 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 PCGF5Q86SE9 256 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 USP37Q86T82 979 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 KRT73Q86Y46 540 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 YAF2Q8IY57 180 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 ADGRG2Q8IZP9 1017 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 SLC15A4Q8N697 577 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 ATG16L2Q8NAA4 619 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 GLIS1Q8NBF1 620 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 SPSB4Q96A44 273 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 LCORQ96JN0 433 aaPredicted RBP6.1□□□□□ -1.43
UPF3B-203ENST00000478840 PAGR1Q9BTK6 254 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 DHX36Q9H2U1 1008 aaKnown RBP6.1□□□□□ -1.43
UPF3B-203ENST00000478840 XPNPEP3Q9NQH7 507 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 USP40Q9NVE5 1235 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 FBXO34Q9NWN3 711 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 RGL1Q9NZL6 768 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 NCDNQ9UBB6 729 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 SLC45A2Q9UMX9 530 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 ZDHHC9Q9Y397 364 aa6.1□□□□□ -1.43
UPF3B-203ENST00000478840 A0A087WZ62 844 aa6.09□□□□□ -1.43
UPF3B-203ENST00000478840 UBE2QL1A1L167 161 aa6.09□□□□□ -1.43
UPF3B-203ENST00000478840 ZNF785A8K8V0 405 aa6.09□□□□□ -1.43
UPF3B-203ENST00000478840 TMEM233B4DJY2 109 aa6.09□□□□□ -1.43
UPF3B-203ENST00000478840 PODXLO00592 558 aa6.09□□□□□ -1.43
UPF3B-203ENST00000478840 NCAM2O15394 837 aa6.09□□□□□ -1.43
UPF3B-203ENST00000478840 INMTO95050 263 aa6.09□□□□□ -1.43
UPF3B-203ENST00000478840 PI3P19957 117 aa6.09□□□□□ -1.43
UPF3B-203ENST00000478840 BTF3P20290 206 aaKnown RBP6.09□□□□□ -1.43
UPF3B-203ENST00000478840 FDXRP22570 491 aa6.09□□□□□ -1.43
UPF3B-203ENST00000478840 MAPK9P45984 424 aa6.09□□□□□ -1.43
UPF3B-203ENST00000478840 PSMC1P62191 440 aaKnown RBP6.09□□□□□ -1.43
UPF3B-203ENST00000478840 RIN1Q13671 783 aa6.09□□□□□ -1.43
UPF3B-203ENST00000478840 POSTNQ15063 836 aa6.09□□□□□ -1.43
UPF3B-203ENST00000478840 ZNF568Q3ZCX4 644 aa6.09□□□□□ -1.43
UPF3B-203ENST00000478840 AMOTQ4VCS5 1084 aa6.09□□□□□ -1.43
UPF3B-203ENST00000478840 CRB2Q5IJ48 1285 aa6.09□□□□□ -1.43
UPF3B-203ENST00000478840 UTP14CQ5TAP6 766 aaKnown RBP6.09□□□□□ -1.43
UPF3B-203ENST00000478840 JAKMIP3Q5VZ66 844 aa6.09□□□□□ -1.43
UPF3B-203ENST00000478840 ANKS6Q68DC2 871 aa6.09□□□□□ -1.43
UPF3B-203ENST00000478840 BORAQ6PGQ7 559 aa6.09□□□□□ -1.43
UPF3B-203ENST00000478840 FBXO38Q6PIJ6 1188 aa6.09□□□□□ -1.43
UPF3B-203ENST00000478840 GALNT15Q8N3T1 639 aa6.09□□□□□ -1.43
UPF3B-203ENST00000478840 PCSK9Q8NBP7 692 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms