RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 CXCL16Q9H2A7 254 aa8.56□□□□□ -1.04
DDX39B-218ENST00000478365 PCIF1Q9H4Z3 704 aa8.56□□□□□ -1.04
DDX39B-218ENST00000478365 INTS13Q9NVM9 706 aa8.56□□□□□ -1.04
DDX39B-218ENST00000478365 AFF4Q9UHB7 1163 aaKnown RBP8.56□□□□□ -1.04
DDX39B-218ENST00000478365 TRAF3IP3Q9Y228 551 aa8.56□□□□□ -1.04
DDX39B-218ENST00000478365 ZFP37Q9Y6Q3 630 aaPredicted RBP8.56□□□□□ -1.04
DDX39B-218ENST00000478365 SCN1AP35498 2009 aa8.56□□□□□ -1.04
DDX39B-218ENST00000478365 GOLGA8IPA6NC78 632 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 GOLGA8JA6NMD2 632 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 KPNA7A9QM74 516 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 ESPNB1AK53 854 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 PSMA7O14818 248 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 TBC1D4O60343 1298 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 STX10O60499 249 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 HUS1O60921 280 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 STAU1O95793 577 aaKnown RBP8.55□□□□□ -1.04
DDX39B-218ENST00000478365 NR3C1P04150 777 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 CPB1P15086 417 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 ATF2P15336 505 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 TNNI1P19237 187 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 TRIM21P19474 475 aaKnown RBP8.55□□□□□ -1.04
DDX39B-218ENST00000478365 PCSK1P29120 753 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 CASP1P29466 404 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 ATICP31939 592 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 OR1D2P34982 312 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 HOXD13P35453 343 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 CYP2J2P51589 502 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 TSPY1Q01534 308 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 SPAG1Q07617 926 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 CYP24A1Q07973 514 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 SNW1Q13573 536 aaKnown RBP8.55□□□□□ -1.04
DDX39B-218ENST00000478365 DNTTIP2Q5QJE6 756 aaKnown RBP8.55□□□□□ -1.04
DDX39B-218ENST00000478365 PPM1LQ5SGD2 360 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 ZNF658Q5TYW1 1059 aaPredicted RBP8.55□□□□□ -1.04
DDX39B-218ENST00000478365 OVOS1Q6IE37 1185 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 FOXR2Q6PJQ5 311 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 CD300LGQ6UXG3 332 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 INTS8Q75QN2 995 aaKnown RBP8.55□□□□□ -1.04
DDX39B-218ENST00000478365 PALB2Q86YC2 1186 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 EFCAB13Q8IY85 973 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 ELMOD1Q8N336 334 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 C1orf127Q8N9H9 656 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 TDRD5Q8NAT2 981 aaKnown RBP8.55□□□□□ -1.04
DDX39B-218ENST00000478365 GLIS3Q8NEA6 775 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 SPATA20Q8TB22 786 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 TMC2Q8TDI7 906 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 SMG7Q92540 1137 aaKnown RBP8.55□□□□□ -1.04
DDX39B-218ENST00000478365 RABGGTAQ92696 567 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 HPS3Q969F9 1004 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 SENP8Q96LD8 212 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 MFSD14AQ96MC6 490 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 CGRRF1Q99675 332 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 C1QTNF1Q9BXJ1 281 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 PRKD2Q9BZL6 878 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 DNAI2Q9GZS0 605 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 KCTD10Q9H3F6 313 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 PIDD1Q9HB75 910 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 PDE11AQ9HCR9 933 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 GDAP2Q9NXN4 497 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.55□□□□□ -1.04
DDX39B-218ENST00000478365 FBXL5Q9UKA1 691 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 CDY1Q9Y6F8 540 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 PLXNA3P51805 1871 aa8.55□□□□□ -1.04
DDX39B-218ENST00000478365 DENND4AQ7Z401 1863 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 CCDC195A0A1B0GUA6 201 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 BICDL2A1A5D9 508 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 LOC730098B7Z3J9 87 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 CYB561D2O14569 222 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 PRRG1O14668 218 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 IKBKBO14920 756 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 CETN3O15182 167 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 CLIC2O15247 247 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 ABLIM3O94929 683 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 FGF19O95750 216 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 LRG1P02750 347 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 ITGB3P05106 788 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 C8AP07357 584 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 KRT13P13646 458 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 P4HA1P13674 534 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 POLR2BP30876 1174 aaKnown RBP8.54□□□□□ -1.04
DDX39B-218ENST00000478365 PSMC2P35998 433 aaKnown RBP8.54□□□□□ -1.04
DDX39B-218ENST00000478365 LHX1P48742 406 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 MYL7Q01449 175 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 ROR1Q01973 937 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 LRRC63Q05C16 580 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 GPR17Q13304 367 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 TRPC3Q13507 836 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 MAPRE1Q15691 268 aaKnown RBP8.54□□□□□ -1.04
DDX39B-218ENST00000478365 NFE2Q16621 373 aaPredicted RBP8.54□□□□□ -1.04
DDX39B-218ENST00000478365 TMC5Q6UXY8 1006 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 CBWD2Q8IUF1 395 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 TCEAL8Q8IYN2 117 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 DCP1BQ8IZD4 617 aaKnown RBP8.54□□□□□ -1.04
DDX39B-218ENST00000478365 ZDHHC14Q8IZN3 488 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 CSGALNACT2Q8N6G5 542 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 TOP6BLQ8N6T0 577 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 TRIML1Q8N9V2 468 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 NXPE3Q969Y0 559 aa8.54□□□□□ -1.04
DDX39B-218ENST00000478365 SYAP1Q96A49 352 aaPredicted RBP8.54□□□□□ -1.04
DDX39B-218ENST00000478365 CHAMP1Q96JM3 812 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms