RNA–Protein interactions for RNA: ENST00000478254.5

GFM1-207, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5

Gene GFM1, Length 3,470 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-207ENST00000478254 DNPEPQ9ULA0 475 aa12.02□□□□□ -0.49
GFM1-207ENST00000478254 PCDHA3Q9Y5H8 950 aa12.02□□□□□ -0.49
GFM1-207ENST00000478254 SPDYE16A6NNV3 312 aaPredicted RBP12.01□□□□□ -0.49
GFM1-207ENST00000478254 ZBTB5O15062 677 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 GAS7O60861 476 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 UFL1O94874 794 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 MAP3K6O95382 1288 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 CYP1A1P04798 512 aaPredicted RBP12.01□□□□□ -0.49
GFM1-207ENST00000478254 NSFP46459 744 aaKnown RBP12.01□□□□□ -0.49
GFM1-207ENST00000478254 AP1B1Q10567 949 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 C11orf63Q6NUN7 778 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 RAPH1Q70E73 1250 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 SHKBP1Q8TBC3 707 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 BORCS6Q96GS4 357 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 KIFC3Q9BVG8 833 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 KRT82Q9NSB4 513 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 MTMR4Q9NYA4 1195 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 RGPD5Q99666 1765 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 FAM86B1E9PN63 330 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 RNASEH1O60930 286 aaKnown RBP12.01□□□□□ -0.49
GFM1-207ENST00000478254 FAM86B2P0C5J1 330 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 NFIXQ14938 502 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 PPP6R3Q5H9R7 873 aaPredicted RBP12.01□□□□□ -0.49
GFM1-207ENST00000478254 ARL10Q8N8L6 244 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 CNBD2Q96M20 576 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 TRAPPC9Q96Q05 1148 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 TMEM109Q9BVC6 243 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 APOL6Q9BWW8 343 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 IFT122Q9HBG6 1241 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 CFLARO15519 480 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 PEX1O43933 1283 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 STAMBPO95630 424 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 INHBAP08476 426 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 NRLP54845 237 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 MARSP56192 900 aaKnown RBP12.01□□□□□ -0.49
GFM1-207ENST00000478254 GTF2IP78347 998 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 UBAP2LQ14157 1087 aaKnown RBP12.01□□□□□ -0.49
GFM1-207ENST00000478254 SMTNL2Q2TAL5 461 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 SLC45A4Q5BKX6 768 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 TMEM63BQ5T3F8 832 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 CENPUQ71F23 418 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 PPM1NQ8N819 430 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 RBM15BQ8NDT2 890 aaKnown RBP12.01□□□□□ -0.49
GFM1-207ENST00000478254 ECSITQ9BQ95 431 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 ZWILCHQ9H900 591 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 RPS6KL1Q9Y6S9 549 aa12.01□□□□□ -0.49
GFM1-207ENST00000478254 SLIT3O75094 1523 aa12□□□□□ -0.49
GFM1-207ENST00000478254 LRP6O75581 1613 aa12□□□□□ -0.49
GFM1-207ENST00000478254 LOC102724428A0A0B4J2F2 783 aa12□□□□□ -0.49
GFM1-207ENST00000478254 GGPS1O95749 300 aa12□□□□□ -0.49
GFM1-207ENST00000478254 VAV1P15498 845 aa12□□□□□ -0.49
GFM1-207ENST00000478254 SIK1P57059 783 aa12□□□□□ -0.49
GFM1-207ENST00000478254 NCOA4Q13772 614 aa12□□□□□ -0.49
GFM1-207ENST00000478254 ASPRV1Q53RT3 343 aa12□□□□□ -0.49
GFM1-207ENST00000478254 DCUN1D2Q6PH85 259 aa12□□□□□ -0.49
GFM1-207ENST00000478254 RBM44Q6ZP01 1051 aaKnown RBP12□□□□□ -0.49
GFM1-207ENST00000478254 NME8Q8N427 588 aa12□□□□□ -0.49
GFM1-207ENST00000478254 LRRN4Q8WUT4 740 aa12□□□□□ -0.49
GFM1-207ENST00000478254 PHACTR1Q9C0D0 580 aa12□□□□□ -0.49
GFM1-207ENST00000478254 PSMC3IPQ9P2W1 217 aaPredicted RBP12□□□□□ -0.49
GFM1-207ENST00000478254 ATXN10Q9UBB4 475 aa12□□□□□ -0.49
GFM1-207ENST00000478254 CASZ1Q86V15 1759 aa12□□□□□ -0.49
GFM1-207ENST00000478254 SLC16A4O15374 487 aa12□□□□□ -0.49
GFM1-207ENST00000478254 SORBS2O94875 1100 aaKnown RBP12□□□□□ -0.49
GFM1-207ENST00000478254 CAMTA2O94983 1202 aa12□□□□□ -0.49
GFM1-207ENST00000478254 GDF11O95390 407 aa12□□□□□ -0.49
GFM1-207ENST00000478254 SPATA31C1P0DKV0 1188 aa12□□□□□ -0.49
GFM1-207ENST00000478254 MAGEA10P43363 369 aaPredicted RBP12□□□□□ -0.49
GFM1-207ENST00000478254 BPIFB4P59827 614 aa12□□□□□ -0.49
GFM1-207ENST00000478254 MOGSQ13724 837 aa12□□□□□ -0.49
GFM1-207ENST00000478254 MARK2Q7KZI7 788 aaKnown RBP12□□□□□ -0.49
GFM1-207ENST00000478254 SDCCAG8Q86SQ7 713 aaPredicted RBP12□□□□□ -0.49
GFM1-207ENST00000478254 RNF148Q8N7C7 305 aa12□□□□□ -0.49
GFM1-207ENST00000478254 EPS8L1Q8TE68 723 aa12□□□□□ -0.49
GFM1-207ENST00000478254 FAM210AQ96ND0 272 aa12□□□□□ -0.49
GFM1-207ENST00000478254 ANKRD27Q96NW4 1050 aa12□□□□□ -0.49
GFM1-207ENST00000478254 SMG5Q9UPR3 1016 aaKnown RBP12□□□□□ -0.49
GFM1-207ENST00000478254 UBR1Q8IWV7 1749 aa12□□□□□ -0.49
GFM1-207ENST00000478254 ZNF189O75820 626 aaPredicted RBP11.99□□□□□ -0.49
GFM1-207ENST00000478254 AQP5P55064 265 aa11.99□□□□□ -0.49
GFM1-207ENST00000478254 ACVR2BQ13705 512 aa11.99□□□□□ -0.49
GFM1-207ENST00000478254 RNF168Q8IYW5 571 aaPredicted RBP11.99□□□□□ -0.49
GFM1-207ENST00000478254 RAB20Q9NX57 234 aa11.99□□□□□ -0.49
GFM1-207ENST00000478254 DUOX1Q9NRD9 1551 aa11.99□□□□□ -0.49
GFM1-207ENST00000478254 XPO1O14980 1071 aaKnown RBP11.99□□□□□ -0.49
GFM1-207ENST00000478254 FUT4P22083 530 aa11.99□□□□□ -0.49
GFM1-207ENST00000478254 RPA1P27694 616 aa11.99□□□□□ -0.49
GFM1-207ENST00000478254 CCNG1P51959 295 aa11.99□□□□□ -0.49
GFM1-207ENST00000478254 MFAP3P55082 362 aa11.99□□□□□ -0.49
GFM1-207ENST00000478254 INHBCP55103 352 aa11.99□□□□□ -0.49
GFM1-207ENST00000478254 PEX3P56589 373 aa11.99□□□□□ -0.49
GFM1-207ENST00000478254 ZNF543Q08ER8 600 aa11.99□□□□□ -0.49
GFM1-207ENST00000478254 BMPR2Q13873 1038 aa11.99□□□□□ -0.49
GFM1-207ENST00000478254 EML3Q32P44 896 aa11.99□□□□□ -0.49
GFM1-207ENST00000478254 BSPRYQ5W0U4 402 aa11.99□□□□□ -0.49
GFM1-207ENST00000478254 PAOXQ6QHF9 649 aa11.99□□□□□ -0.49
GFM1-207ENST00000478254 OXNAD1Q96HP4 312 aaPredicted RBP11.99□□□□□ -0.49
GFM1-207ENST00000478254 PAFAH2Q99487 392 aa11.99□□□□□ -0.49
GFM1-207ENST00000478254 RANBP17Q9H2T7 1088 aaKnown RBP11.99□□□□□ -0.49
GFM1-207ENST00000478254 RIOX1Q9H6W3 641 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms