RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 ZSCAN18Q8TBC5 510 aaPredicted RBP18.15■□□□□ 0.5
TRIM13-208ENST00000478111 CALML4Q96GE6 196 aa18.15■□□□□ 0.5
TRIM13-208ENST00000478111 TSPAN18Q96SJ8 248 aa18.15■□□□□ 0.5
TRIM13-208ENST00000478111 RPF1Q9H9Y2 349 aaKnown RBP18.15■□□□□ 0.5
TRIM13-208ENST00000478111 PARVGQ9HBI0 331 aa18.15■□□□□ 0.5
TRIM13-208ENST00000478111 PCDHGA2Q9Y5H1 932 aa18.15■□□□□ 0.5
TRIM13-208ENST00000478111 DENND4CQ5VZ89 1909 aa18.14■□□□□ 0.49
TRIM13-208ENST00000478111 OR6C75A6NL08 312 aa18.14■□□□□ 0.49
TRIM13-208ENST00000478111 ANKRD63C9JTQ0 380 aa18.14■□□□□ 0.49
TRIM13-208ENST00000478111 K7ENM7 598 aa18.14■□□□□ 0.49
TRIM13-208ENST00000478111 MAN2B1O00754 1011 aa18.14■□□□□ 0.49
TRIM13-208ENST00000478111 TRAK2O60296 914 aa18.14■□□□□ 0.49
TRIM13-208ENST00000478111 TDGF1P13385 188 aa18.14■□□□□ 0.49
TRIM13-208ENST00000478111 PLCG1P19174 1290 aa18.14■□□□□ 0.49
TRIM13-208ENST00000478111 TYMPP19971 482 aa18.14■□□□□ 0.49
TRIM13-208ENST00000478111 GTF2BQ00403 316 aa18.14■□□□□ 0.49
TRIM13-208ENST00000478111 KARSQ15046 597 aaKnown RBP18.14■□□□□ 0.49
TRIM13-208ENST00000478111 JADE1Q6IE81 842 aa18.14■□□□□ 0.49
TRIM13-208ENST00000478111 MAMSTRQ6ZN01 415 aa18.14■□□□□ 0.49
TRIM13-208ENST00000478111 DEPDC1BQ8WUY9 529 aa18.14■□□□□ 0.49
TRIM13-208ENST00000478111 RAD54LQ92698 747 aa18.14■□□□□ 0.49
TRIM13-208ENST00000478111 TMEM209Q96SK2 561 aa18.14■□□□□ 0.49
TRIM13-208ENST00000478111 MSTO1Q9BUK6 570 aa18.14■□□□□ 0.49
TRIM13-208ENST00000478111 GPR88Q9GZN0 384 aa18.14■□□□□ 0.49
TRIM13-208ENST00000478111 ZSCAN32Q9NX65 697 aa18.14■□□□□ 0.49
TRIM13-208ENST00000478111 SLC27A5Q9Y2P5 690 aa18.14■□□□□ 0.49
TRIM13-208ENST00000478111 KIF26AQ9ULI4 1882 aaPredicted RBP18.14■□□□□ 0.49
TRIM13-208ENST00000478111 A0A1W2PRU2 124 aa18.13■□□□□ 0.49
TRIM13-208ENST00000478111 MTMR11A4FU01 709 aa18.13■□□□□ 0.49
TRIM13-208ENST00000478111 HEPACAM2A8MVW5 462 aa18.13■□□□□ 0.49
TRIM13-208ENST00000478111 PIRO00625 290 aa18.13■□□□□ 0.49
TRIM13-208ENST00000478111 XPOTO43592 962 aaKnown RBP18.13■□□□□ 0.49
TRIM13-208ENST00000478111 FAM13AO94988 1023 aa18.13■□□□□ 0.49
TRIM13-208ENST00000478111 NMT1P30419 496 aaKnown RBP18.13■□□□□ 0.49
TRIM13-208ENST00000478111 MYBPC2Q14324 1141 aa18.13■□□□□ 0.49
TRIM13-208ENST00000478111 C9orf57Q5W0N0 161 aa18.13■□□□□ 0.49
TRIM13-208ENST00000478111 LARP1BQ659C4 914 aaKnown RBP18.13■□□□□ 0.49
TRIM13-208ENST00000478111 OVOS1Q6IE37 1185 aa18.13■□□□□ 0.49
TRIM13-208ENST00000478111 USP37Q86T82 979 aa18.13■□□□□ 0.49
TRIM13-208ENST00000478111 CD302Q8IX05 232 aa18.13■□□□□ 0.49
TRIM13-208ENST00000478111 ATAD1Q8NBU5 361 aa18.13■□□□□ 0.49
TRIM13-208ENST00000478111 SENP8Q96LD8 212 aa18.13■□□□□ 0.49
TRIM13-208ENST00000478111 HINFPQ9BQA5 517 aa18.13■□□□□ 0.49
TRIM13-208ENST00000478111 MKNK1Q9BUB5 465 aa18.13■□□□□ 0.49
TRIM13-208ENST00000478111 CHRDQ9H2X0 955 aa18.13■□□□□ 0.49
TRIM13-208ENST00000478111 NDRG2Q9UN36 371 aaKnown RBP18.13■□□□□ 0.49
TRIM13-208ENST00000478111 SMC3Q9UQE7 1217 aa18.13■□□□□ 0.49
TRIM13-208ENST00000478111 PIAS3Q9Y6X2 628 aa18.13■□□□□ 0.49
TRIM13-208ENST00000478111 ANO9A1A5B4 782 aa18.12■□□□□ 0.49
TRIM13-208ENST00000478111 TISP43B9A030 160 aa18.12■□□□□ 0.49
TRIM13-208ENST00000478111 NFICP08651 508 aa18.12■□□□□ 0.49
TRIM13-208ENST00000478111 LONP1P36776 959 aaKnown RBP18.12■□□□□ 0.49
TRIM13-208ENST00000478111 EPHB3P54753 998 aa18.12■□□□□ 0.49
TRIM13-208ENST00000478111 PLD1Q13393 1074 aa18.12■□□□□ 0.49
TRIM13-208ENST00000478111 ZC2HC1CQ53FD0 456 aaPredicted RBP18.12■□□□□ 0.49
TRIM13-208ENST00000478111 STXBP5Q5T5C0 1151 aa18.12■□□□□ 0.49
TRIM13-208ENST00000478111 GAREM2Q75VX8 874 aa18.12■□□□□ 0.49
TRIM13-208ENST00000478111 TTC9BQ8N6N2 239 aa18.12■□□□□ 0.49
TRIM13-208ENST00000478111 OR10T2Q8NGX3 314 aa18.12■□□□□ 0.49
TRIM13-208ENST00000478111 ATRIPQ8WXE1 791 aa18.12■□□□□ 0.49
TRIM13-208ENST00000478111 FAM3CQ92520 227 aa18.12■□□□□ 0.49
TRIM13-208ENST00000478111 FAM212AQ96EL1 285 aa18.12■□□□□ 0.49
TRIM13-208ENST00000478111 LRRC3BQ96PB8 259 aa18.12■□□□□ 0.49
TRIM13-208ENST00000478111 EPC1Q9H2F5 836 aa18.12■□□□□ 0.49
TRIM13-208ENST00000478111 STYXL1Q9Y6J8 313 aa18.12■□□□□ 0.49
TRIM13-208ENST00000478111 ZNF263O14978 683 aa18.11■□□□□ 0.49
TRIM13-208ENST00000478111 SOAT2O75908 522 aa18.11■□□□□ 0.49
TRIM13-208ENST00000478111 CYP11A1P05108 521 aa18.11■□□□□ 0.49
TRIM13-208ENST00000478111 ACOT2P49753 483 aa18.11■□□□□ 0.49
TRIM13-208ENST00000478111 FCHO2Q0JRZ9 810 aa18.11■□□□□ 0.49
TRIM13-208ENST00000478111 SF3A1Q15459 793 aaKnown RBP18.11■□□□□ 0.49
TRIM13-208ENST00000478111 USP49Q70CQ1 688 aa18.11■□□□□ 0.49
TRIM13-208ENST00000478111 DNAJB7Q7Z6W7 309 aaPredicted RBP18.11■□□□□ 0.49
TRIM13-208ENST00000478111 GPIHBP1Q8IV16 184 aa18.11■□□□□ 0.49
TRIM13-208ENST00000478111 LARP4BQ92615 738 aaKnown RBP18.11■□□□□ 0.49
TRIM13-208ENST00000478111 PSMG2Q969U7 264 aa18.11■□□□□ 0.49
TRIM13-208ENST00000478111 E2F7Q96AV8 911 aa18.11■□□□□ 0.49
TRIM13-208ENST00000478111 IKZF4Q9H2S9 585 aa18.11■□□□□ 0.49
TRIM13-208ENST00000478111 ST6GALNAC4Q9H4F1 302 aa18.11■□□□□ 0.49
TRIM13-208ENST00000478111 LMAN1LQ9HAT1 526 aa18.11■□□□□ 0.49
TRIM13-208ENST00000478111 DLL3Q9NYJ7 618 aa18.11■□□□□ 0.49
TRIM13-208ENST00000478111 DERAQ9Y315 318 aa18.11■□□□□ 0.49
TRIM13-208ENST00000478111 ASB3Q9Y575 518 aa18.11■□□□□ 0.49
TRIM13-208ENST00000478111 CHADO15335 359 aa18.1■□□□□ 0.49
TRIM13-208ENST00000478111 BMP15O95972 392 aa18.1■□□□□ 0.49
TRIM13-208ENST00000478111 KRT18P05783 430 aaKnown RBP18.1■□□□□ 0.49
TRIM13-208ENST00000478111 CHRNB1P11230 501 aa18.1■□□□□ 0.49
TRIM13-208ENST00000478111 ODC1P11926 461 aa18.1■□□□□ 0.49
TRIM13-208ENST00000478111 PAX3P23760 479 aa18.1■□□□□ 0.49
TRIM13-208ENST00000478111 DDIT3P35638 169 aa18.1■□□□□ 0.49
TRIM13-208ENST00000478111 ALDH1A3P47895 512 aa18.1■□□□□ 0.49
TRIM13-208ENST00000478111 MCM2P49736 904 aa18.1■□□□□ 0.49
TRIM13-208ENST00000478111 MLLT6P55198 1093 aaPredicted RBP18.1■□□□□ 0.49
TRIM13-208ENST00000478111 GAS6Q14393 721 aa18.1■□□□□ 0.49
TRIM13-208ENST00000478111 TMEM132DQ14C87 1099 aa18.1■□□□□ 0.49
TRIM13-208ENST00000478111 WDR44Q5JSH3 913 aa18.1■□□□□ 0.49
TRIM13-208ENST00000478111 CRELD2Q6UXH1 353 aaPredicted RBP18.1■□□□□ 0.49
TRIM13-208ENST00000478111 BRAPQ7Z569 592 aa18.1■□□□□ 0.49
TRIM13-208ENST00000478111 ARID3BQ8IVW6 561 aaPredicted RBP18.1■□□□□ 0.49
TRIM13-208ENST00000478111 FAM126AQ9BYI3 521 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms