RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 ZNF839A8K0R7 811 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 H7C0S8 307 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 EYA2O00167 538 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 TRAF5O00463 557 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 SCDO00767 359 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 SLC7A4O43246 635 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 TSPAN3O60637 253 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 USO1O60763 962 aaKnown RBP3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 SNX4O95219 450 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 MT-ND3P03897 115 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 C4BPAP04003 597 aaKnown RBP3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 S100A6P06703 90 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 RHOXF2BP0C7M4 288 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 EEF2P13639 858 aaKnown RBP3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 CSTF2P33240 577 aaKnown RBP eCLIP3.86□□□□□ -1.798e-9■■■■■ 38.4
FNDC3B-209ENST00000478016 ATP6V1E1P36543 226 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 HSD17B2P37059 387 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 STAT1P42224 750 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 PHKA1P46020 1223 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 AK2P54819 239 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 C21orf58P58505 322 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 NUCB2P80303 420 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 DLX2Q07687 328 aaPredicted RBP3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 ITKQ08881 620 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 SEC23AQ15436 765 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 OASLQ15646 514 aaKnown RBP3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 CCNG2Q16589 344 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 SKIDA1Q1XH10 827 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 ANKDD1AQ495B1 522 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 MINDY4Q4G0A6 757 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 TPGS2Q68CL5 300 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 PKN3Q6P5Z2 889 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 TLDC1Q6P9B6 456 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 LIPIQ6XZB0 460 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 LCNL1Q6ZST4 164 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 KRT74Q7RTS7 529 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 PPP1R42Q7Z4L9 355 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 RSPH3Q86UC2 560 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 STK32CQ86UX6 486 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 ZBTB46Q86UZ6 589 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 PROSER1Q86XN7 944 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 KIF18BQ86Y91 864 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 MYLK4Q86YV6 388 aaPredicted RBP3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 GALNT13Q8IUC8 556 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 FAM186BQ8IYM0 893 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 SLC7A5P1Q8MH63 180 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 AHI1Q8N157 1196 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 LRRC71Q8N4P6 559 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 AFAP1Q8N556 730 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 AADATQ8N5Z0 425 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 DTX3Q8N9I9 347 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 PCSK9Q8NBP7 692 aaKnown RBP3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 GOLGA5Q8TBA6 731 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 IGDCC4Q8TDY8 1250 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 DENND1AQ8TEH3 1009 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 POF1BQ8WVV4 589 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 CTNNBL1Q8WYA6 563 aaPredicted RBP3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.86□□□□□ -1.799e-7■■■■■ 51.3
FNDC3B-209ENST00000478016 SGCDQ92629 289 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 CENPIQ92674 756 aaPredicted RBP3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 HDAC2Q92769 488 aaKnown RBP3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 DLG3Q92796 817 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 CNDP1Q96KN2 507 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 CCDC114Q96M63 670 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 RHOXF2Q9BQY4 288 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 ORAI3Q9BRQ5 295 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 GPATCH1Q9BRR8 931 aaKnown RBP3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 NTPCRQ9BSD7 190 aaKnown RBP3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 TARS2Q9BW92 718 aaKnown RBP3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 C2orf40Q9H1Z8 148 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 TAOK3Q9H2K8 898 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 MROH8Q9H579 483 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 VCPKMTQ9H867 229 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 BRD9Q9H8M2 597 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 AASDHPPTQ9NRN7 309 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 KCNH7Q9NS40 1196 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 SPATA6Q9NWH7 488 aaPredicted RBP3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 CHMP5Q9NZZ3 219 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 RBPJLQ9UBG7 517 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 HDAC6Q9UBN7 1215 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 AGO2Q9UKV8 859 aaKnown RBP3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 MTUS1Q9ULD2 1270 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 WASF3Q9UPY6 502 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 KIF3AQ9Y496 699 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 TRIM17Q9Y577 477 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 B3GALT1Q9Y5Z6 326 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 EVC2Q86UK5 1308 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 FAM83GA6ND36 823 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 B4E171 279 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 F5H0A9 414 aaPredicted RBP3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 F5H423 210 aaPredicted RBP3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 H0YC42 278 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 H7C1D1 291 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 M0R3H8 397 aa3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 EIF3FO00303 357 aaPredicted RBP3.85□□□□□ -1.79
FNDC3B-209ENST00000478016 ERC2O15083 957 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms