RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 ANKRD40Q6AI12 368 aa10.58□□□□□ -0.72
NIFK-205ENST00000477693 PTCRAQ6ISU1 281 aaPredicted RBP10.58□□□□□ -0.72
NIFK-205ENST00000477693 ANKRD54Q6NXT1 300 aa10.58□□□□□ -0.72
NIFK-205ENST00000477693 LLGL2Q6P1M3 1020 aa10.58□□□□□ -0.72
NIFK-205ENST00000477693 USP37Q86T82 979 aa10.58□□□□□ -0.72
NIFK-205ENST00000477693 NELFCDQ8IXH7 590 aa10.58□□□□□ -0.72
NIFK-205ENST00000477693 ZC3H3Q8IXZ2 948 aaKnown RBP10.58□□□□□ -0.72
NIFK-205ENST00000477693 SMYD4Q8IYR2 804 aaPredicted RBP10.58□□□□□ -0.72
NIFK-205ENST00000477693 BEST2Q8NFU1 509 aa10.58□□□□□ -0.72
NIFK-205ENST00000477693 LNX1Q8TBB1 728 aaPredicted RBP10.58□□□□□ -0.72
NIFK-205ENST00000477693 RIN2Q8WYP3 895 aaPredicted RBP10.58□□□□□ -0.72
NIFK-205ENST00000477693 B3GALT6Q96L58 329 aa10.58□□□□□ -0.72
NIFK-205ENST00000477693 PCIF1Q9H4Z3 704 aa10.58□□□□□ -0.72
NIFK-205ENST00000477693 FANCLQ9NW38 375 aa10.58□□□□□ -0.72
NIFK-205ENST00000477693 RBAKQ9NYW8 714 aaPredicted RBP10.58□□□□□ -0.72
NIFK-205ENST00000477693 HSPBP1Q9NZL4 362 aa10.58□□□□□ -0.72
NIFK-205ENST00000477693 MAPK8IP1Q9UQF2 711 aa10.58□□□□□ -0.72
NIFK-205ENST00000477693 NUB1Q9Y5A7 615 aa10.58□□□□□ -0.72
NIFK-205ENST00000477693 MYO7AQ13402 2215 aa10.57□□□□□ -0.72
NIFK-205ENST00000477693 ANO9A1A5B4 782 aa10.57□□□□□ -0.72
NIFK-205ENST00000477693 GOLGA8IPA6NC78 632 aa10.57□□□□□ -0.72
NIFK-205ENST00000477693 ZNF233A6NK53 670 aa10.57□□□□□ -0.72
NIFK-205ENST00000477693 GOLGA8JA6NMD2 632 aa10.57□□□□□ -0.72
NIFK-205ENST00000477693 SYN3O14994 580 aa10.57□□□□□ -0.72
NIFK-205ENST00000477693 SLC16A3O15427 465 aaKnown RBP10.57□□□□□ -0.72
NIFK-205ENST00000477693 MBTPS2O43462 519 aa10.57□□□□□ -0.72
NIFK-205ENST00000477693 PAX3P23760 479 aa10.57□□□□□ -0.72
NIFK-205ENST00000477693 TKTP29401 623 aaKnown RBP10.57□□□□□ -0.72
NIFK-205ENST00000477693 AARSP49588 968 aaKnown RBP eCLIP10.57□□□□□ -0.72
NIFK-205ENST00000477693 WNT7BP56706 349 aa10.57□□□□□ -0.72
NIFK-205ENST00000477693 ADAM9Q13443 819 aa10.57□□□□□ -0.72
NIFK-205ENST00000477693 SMAD2Q15796 467 aaKnown RBP10.57□□□□□ -0.72
NIFK-205ENST00000477693 PSMD5Q16401 504 aa10.57□□□□□ -0.72
NIFK-205ENST00000477693 CEP57Q86XR8 500 aa10.57□□□□□ -0.72
NIFK-205ENST00000477693 EFCAB13Q8IY85 973 aa10.57□□□□□ -0.72
NIFK-205ENST00000477693 TMEM130Q8N3G9 435 aa10.57□□□□□ -0.72
NIFK-205ENST00000477693 SUSD3Q96L08 255 aa10.57□□□□□ -0.72
NIFK-205ENST00000477693 DUSP9Q99956 384 aaKnown RBP10.57□□□□□ -0.72
NIFK-205ENST00000477693 CLSTN3Q9BQT9 956 aa10.57□□□□□ -0.72
NIFK-205ENST00000477693 SRRTQ9BXP5 876 aaKnown RBP10.57□□□□□ -0.72
NIFK-205ENST00000477693 DZANK1Q9NVP4 752 aa10.57□□□□□ -0.72
NIFK-205ENST00000477693 DMAC2Q9NW81 257 aa10.57□□□□□ -0.72
NIFK-205ENST00000477693 MTRRQ9UBK8 725 aa10.57□□□□□ -0.72
NIFK-205ENST00000477693 LIMA1Q9UHB6 759 aaKnown RBP10.57□□□□□ -0.72
NIFK-205ENST00000477693 FAM50BQ9Y247 325 aa10.57□□□□□ -0.72
NIFK-205ENST00000477693 ARIH1Q9Y4X5 557 aaPredicted RBP10.57□□□□□ -0.72
NIFK-205ENST00000477693 TCF20Q9UGU0 1960 aaKnown RBP10.57□□□□□ -0.72
NIFK-205ENST00000477693 PIEZO1Q92508 2521 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 ANK1P16157 1881 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 M0QZQ0 153 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 PIRO00625 290 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 GLUD1P00367 558 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 SERPINC1P01008 464 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 IL9P15248 144 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 EPCAMP16422 314 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 PSMC2P35998 433 aaKnown RBP10.56□□□□□ -0.72
NIFK-205ENST00000477693 GUCY2FP51841 1108 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 MCCD1P59942 119 aaPredicted RBP10.56□□□□□ -0.72
NIFK-205ENST00000477693 ITIH3Q06033 890 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 MRPL58Q14197 206 aaKnown RBP10.56□□□□□ -0.72
NIFK-205ENST00000477693 SURF1Q15526 300 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 CLUL1Q15846 466 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 SNRNP35Q16560 246 aaKnown RBP10.56□□□□□ -0.72
NIFK-205ENST00000477693 TCP11X2Q5H9J9 407 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 C9orf57Q5W0N0 161 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 LILRA6Q6PI73 481 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 SYCE2Q6PIF2 218 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 PRSS55Q6UWB4 352 aaPredicted RBP10.56□□□□□ -0.72
NIFK-205ENST00000477693 ANKS3Q6ZW76 656 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.56□□□□□ -0.72
NIFK-205ENST00000477693 FRMD5Q7Z6J6 570 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 CBWD2Q8IUF1 395 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 XXYLT1Q8NBI6 393 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 HDAC7Q8WUI4 952 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 SUSD6Q92537 303 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 MRFAP1L1Q96HT8 127 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 MED15Q96RN5 788 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 S1PR5Q9H228 398 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 DPP3Q9NY33 737 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 DPP7Q9UHL4 492 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 FRMD4BQ9Y2L6 1034 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 BACE2Q9Y5Z0 518 aa10.56□□□□□ -0.72
NIFK-205ENST00000477693 VWA8A3KMH1 1905 aa10.55□□□□□ -0.72
NIFK-205ENST00000477693 I3L4J1 428 aa10.55□□□□□ -0.72
NIFK-205ENST00000477693 PPEF2O14830 753 aa10.55□□□□□ -0.72
NIFK-205ENST00000477693 CLIC2O15247 247 aa10.55□□□□□ -0.72
NIFK-205ENST00000477693 TGM5O43548 720 aa10.55□□□□□ -0.72
NIFK-205ENST00000477693 TBC1D4O60343 1298 aa10.55□□□□□ -0.72
NIFK-205ENST00000477693 PAPLNO95428 1278 aa10.55□□□□□ -0.72
NIFK-205ENST00000477693 NR3C1P04150 777 aa10.55□□□□□ -0.72
NIFK-205ENST00000477693 EPB41P11171 864 aaKnown RBP10.55□□□□□ -0.72
NIFK-205ENST00000477693 RPL17P18621 184 aaKnown RBP10.55□□□□□ -0.72
NIFK-205ENST00000477693 NR2F2P24468 414 aa10.55□□□□□ -0.72
NIFK-205ENST00000477693 STX17P56962 302 aa10.55□□□□□ -0.72
NIFK-205ENST00000477693 LILRA4P59901 499 aa10.55□□□□□ -0.72
NIFK-205ENST00000477693 VARS2Q5ST30 1063 aaKnown RBP10.55□□□□□ -0.72
NIFK-205ENST00000477693 SMYD5Q6GMV2 418 aa10.55□□□□□ -0.72
NIFK-205ENST00000477693 ELMSAN1Q6PJG2 1045 aa10.55□□□□□ -0.72
NIFK-205ENST00000477693 C1orf127Q8N9H9 656 aa10.55□□□□□ -0.72
NIFK-205ENST00000477693 APPL2Q8NEU8 664 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms