RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 CXorf38Q8TB03 319 aa23.5■■□□□ 1.35
COL9A3-211ENST00000477612 CHAMP1Q96JM3 812 aa23.5■■□□□ 1.35
COL9A3-211ENST00000477612 SCAND2PQ9GZW5 306 aaPredicted RBP23.5■■□□□ 1.35
COL9A3-211ENST00000477612 KIAA1586Q9HCI6 787 aa23.5■■□□□ 1.35
COL9A3-211ENST00000477612 A0A1B0GVL5 298 aa23.49■■□□□ 1.35
COL9A3-211ENST00000477612 RHOP08100 348 aa23.49■■□□□ 1.35
COL9A3-211ENST00000477612 PNPLA4P41247 253 aa23.49■■□□□ 1.35
COL9A3-211ENST00000477612 HTR4Q13639 388 aa23.49■■□□□ 1.35
COL9A3-211ENST00000477612 SURF1Q15526 300 aa23.49■■□□□ 1.35
COL9A3-211ENST00000477612 SUGP1Q8IWZ8 645 aaKnown RBP23.49■■□□□ 1.35
COL9A3-211ENST00000477612 C1orf127Q8N9H9 656 aa23.49■■□□□ 1.35
COL9A3-211ENST00000477612 ITFG1Q8TB96 612 aa23.49■■□□□ 1.35
COL9A3-211ENST00000477612 RSAD2Q8WXG1 361 aa23.49■■□□□ 1.35
COL9A3-211ENST00000477612 PAGE5Q96GU1 130 aa23.49■■□□□ 1.35
COL9A3-211ENST00000477612 HSPBP1Q9NZL4 362 aa23.49■■□□□ 1.35
COL9A3-211ENST00000477612 HSFX1Q9UBD0 423 aa23.49■■□□□ 1.35
COL9A3-211ENST00000477612 ZNF233A6NK53 670 aa23.48■■□□□ 1.35
COL9A3-211ENST00000477612 KPNA7A9QM74 516 aa23.48■■□□□ 1.35
COL9A3-211ENST00000477612 CYB561D2O14569 222 aa23.48■■□□□ 1.35
COL9A3-211ENST00000477612 MICAL2O94851 1124 aa23.48■■□□□ 1.35
COL9A3-211ENST00000477612 MYL1P05976 194 aa23.48■■□□□ 1.35
COL9A3-211ENST00000477612 TFAMQ00059 246 aaKnown RBP23.48■■□□□ 1.35
COL9A3-211ENST00000477612 BECN1Q14457 450 aa23.48■■□□□ 1.35
COL9A3-211ENST00000477612 SV2CQ496J9 727 aa23.48■■□□□ 1.35
COL9A3-211ENST00000477612 ZNF560Q96MR9 790 aa23.48■■□□□ 1.35
COL9A3-211ENST00000477612 PDE11AQ9HCR9 933 aa23.48■■□□□ 1.35
COL9A3-211ENST00000477612 AGPAT3Q9NRZ7 376 aa23.48■■□□□ 1.35
COL9A3-211ENST00000477612 CGNQ9P2M7 1197 aaKnown RBP23.48■■□□□ 1.35
COL9A3-211ENST00000477612 A0A1W2PQ27 194 aa23.47■■□□□ 1.35
COL9A3-211ENST00000477612 A0A1W2PQ64 194 aa23.47■■□□□ 1.35
COL9A3-211ENST00000477612 A0A1W2PQD8 194 aa23.47■■□□□ 1.35
COL9A3-211ENST00000477612 PDGFBP01127 241 aaPredicted RBP23.47■■□□□ 1.35
COL9A3-211ENST00000477612 OR4Q2P0C623 313 aa23.47■■□□□ 1.35
COL9A3-211ENST00000477612 PSMD2Q13200 908 aa23.47■■□□□ 1.35
COL9A3-211ENST00000477612 PRSS36Q5K4E3 855 aa23.47■■□□□ 1.35
COL9A3-211ENST00000477612 CENPPQ6IPU0 288 aa23.47■■□□□ 1.35
COL9A3-211ENST00000477612 NPAS3Q8IXF0 933 aa23.47■■□□□ 1.35
COL9A3-211ENST00000477612 C12orf56Q8IXR9 622 aa23.47■■□□□ 1.35
COL9A3-211ENST00000477612 GRAMD1CQ8IYS0 662 aa23.47■■□□□ 1.35
COL9A3-211ENST00000477612 LRRC52Q8N7C0 313 aa23.47■■□□□ 1.35
COL9A3-211ENST00000477612 RTP3Q9BQQ7 232 aa23.47■■□□□ 1.35
COL9A3-211ENST00000477612 SLC39A2Q9NP94 309 aa23.47■■□□□ 1.35
COL9A3-211ENST00000477612 WNT16Q9UBV4 365 aa23.47■■□□□ 1.35
COL9A3-211ENST00000477612 ITGA11Q9UKX5 1188 aa23.47■■□□□ 1.35
COL9A3-211ENST00000477612 MRPS23Q9Y3D9 190 aaKnown RBP23.47■■□□□ 1.35
COL9A3-211ENST00000477612 MUC6Q6W4X9 2439 aa23.47■■□□□ 1.35
COL9A3-211ENST00000477612 ITGB3P05106 788 aa23.46■■□□□ 1.35
COL9A3-211ENST00000477612 SRFP11831 508 aa23.46■■□□□ 1.35
COL9A3-211ENST00000477612 POLR2BP30876 1174 aaKnown RBP23.46■■□□□ 1.35
COL9A3-211ENST00000477612 PLA2G5P39877 138 aa23.46■■□□□ 1.35
COL9A3-211ENST00000477612 EPHA5P54756 1037 aa23.46■■□□□ 1.35
COL9A3-211ENST00000477612 TWF1Q12792 350 aa23.46■■□□□ 1.35
COL9A3-211ENST00000477612 SLC5A9Q2M3M2 681 aa23.46■■□□□ 1.35
COL9A3-211ENST00000477612 CBWD2Q8IUF1 395 aa23.46■■□□□ 1.35
COL9A3-211ENST00000477612 OR10T2Q8NGX3 314 aa23.46■■□□□ 1.35
COL9A3-211ENST00000477612 FGF14Q92915 247 aa23.46■■□□□ 1.35
COL9A3-211ENST00000477612 TMEM209Q96SK2 561 aa23.46■■□□□ 1.35
COL9A3-211ENST00000477612 ZCWPW1Q9H0M4 648 aa23.46■■□□□ 1.35
COL9A3-211ENST00000477612 CRISPLD1Q9H336 500 aa23.46■■□□□ 1.35
COL9A3-211ENST00000477612 INTS13Q9NVM9 706 aa23.46■■□□□ 1.35
COL9A3-211ENST00000477612 GDE1Q9NZC3 331 aa23.46■■□□□ 1.35
COL9A3-211ENST00000477612 CEP72Q9P209 647 aa23.46■■□□□ 1.35
COL9A3-211ENST00000477612 AGAP1Q9UPQ3 857 aa23.46■■□□□ 1.35
COL9A3-211ENST00000477612 NUMBLQ9Y6R0 609 aa23.46■■□□□ 1.35
COL9A3-211ENST00000477612 MTMR11A4FU01 709 aa23.45■■□□□ 1.34
COL9A3-211ENST00000477612 ZNF197O14709 1029 aa23.45■■□□□ 1.34
COL9A3-211ENST00000477612 NARSO43776 548 aaKnown RBP23.45■■□□□ 1.34
COL9A3-211ENST00000477612 AVPR2P30518 371 aa23.45■■□□□ 1.34
COL9A3-211ENST00000477612 SYKP43405 635 aa23.45■■□□□ 1.34
COL9A3-211ENST00000477612 KNOP1Q1ED39 458 aaKnown RBP23.45■■□□□ 1.34
COL9A3-211ENST00000477612 POTEHQ6S545 545 aa23.45■■□□□ 1.34
COL9A3-211ENST00000477612 PARM1Q6UWI2 310 aa23.45■■□□□ 1.34
COL9A3-211ENST00000477612 MTSS1LQ765P7 747 aa23.45■■□□□ 1.34
COL9A3-211ENST00000477612 METTL23Q86XA0 190 aa23.45■■□□□ 1.34
COL9A3-211ENST00000477612 ELMOD1Q8N336 334 aa23.45■■□□□ 1.34
COL9A3-211ENST00000477612 LEMD2Q8NC56 503 aa23.45■■□□□ 1.34
COL9A3-211ENST00000477612 TMEM174Q8WUU8 243 aa23.45■■□□□ 1.34
COL9A3-211ENST00000477612 ZNF512Q96ME7 567 aaPredicted RBP23.45■■□□□ 1.34
COL9A3-211ENST00000477612 PRRX2Q99811 253 aa23.45■■□□□ 1.34
COL9A3-211ENST00000477612 GDAP2Q9NXN4 497 aa23.45■■□□□ 1.34
COL9A3-211ENST00000477612 SIX4Q9UIU6 781 aa23.45■■□□□ 1.34
COL9A3-211ENST00000477612 YIPF1Q9Y548 306 aa23.45■■□□□ 1.34
COL9A3-211ENST00000477612 NDUFA8P51970 172 aa23.44■■□□□ 1.34
COL9A3-211ENST00000477612 NUBP1P53384 320 aa23.44■■□□□ 1.34
COL9A3-211ENST00000477612 RBP5P82980 135 aa23.44■■□□□ 1.34
COL9A3-211ENST00000477612 SMARCB1Q12824 385 aa23.44■■□□□ 1.34
COL9A3-211ENST00000477612 STK4Q13043 487 aa23.44■■□□□ 1.34
COL9A3-211ENST00000477612 DUSP4Q13115 394 aa23.44■■□□□ 1.34
COL9A3-211ENST00000477612 PLD1Q13393 1074 aa23.44■■□□□ 1.34
COL9A3-211ENST00000477612 WSCD1Q658N2 575 aa23.44■■□□□ 1.34
COL9A3-211ENST00000477612 SCARA3Q6AZY7 606 aa23.44■■□□□ 1.34
COL9A3-211ENST00000477612 IQCEQ6IPM2 695 aa23.44■■□□□ 1.34
COL9A3-211ENST00000477612 HS2ST1Q7LGA3 356 aa23.44■■□□□ 1.34
COL9A3-211ENST00000477612 NELFCDQ8IXH7 590 aa23.44■■□□□ 1.34
COL9A3-211ENST00000477612 THEM5Q8N1Q8 247 aa23.44■■□□□ 1.34
COL9A3-211ENST00000477612 CSGALNACT2Q8N6G5 542 aa23.44■■□□□ 1.34
COL9A3-211ENST00000477612 XXYLT1Q8NBI6 393 aa23.44■■□□□ 1.34
COL9A3-211ENST00000477612 SPATA18Q8TC71 538 aa23.44■■□□□ 1.34
COL9A3-211ENST00000477612 ANKRD36BP1Q96IX9 119 aa23.44■■□□□ 1.34
COL9A3-211ENST00000477612 PGLYRP2Q96PD5 576 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms