RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 MTMR2Q13614 643 aa19.15■□□□□ 0.66
CCM2-209ENST00000477605 EMC2Q15006 297 aa19.15■□□□□ 0.66
CCM2-209ENST00000477605 GNPTABQ3T906 1256 aa19.15■□□□□ 0.66
CCM2-209ENST00000477605 TMEM270Q6UE05 265 aa19.15■□□□□ 0.66
CCM2-209ENST00000477605 CCDC60Q8IWA6 550 aaPredicted RBP19.15■□□□□ 0.66
CCM2-209ENST00000477605 CYP4X1Q8N118 509 aa19.15■□□□□ 0.66
CCM2-209ENST00000477605 ELMO3Q96BJ8 720 aa19.15■□□□□ 0.66
CCM2-209ENST00000477605 ECT2Q9H8V3 914 aa19.15■□□□□ 0.66
CCM2-209ENST00000477605 APOBEC3GQ9HC16 384 aaKnown RBP19.15■□□□□ 0.66
CCM2-209ENST00000477605 RBAKQ9NYW8 714 aaPredicted RBP19.15■□□□□ 0.66
CCM2-209ENST00000477605 GSTTP1A0A1W2PQM5 241 aa19.14■□□□□ 0.65
CCM2-209ENST00000477605 FAM47DPA6NHR8 397 aa19.14■□□□□ 0.65
CCM2-209ENST00000477605 SUPT20HL2P0C7V6 817 aa19.14■□□□□ 0.65
CCM2-209ENST00000477605 ALADP13716 330 aa19.14■□□□□ 0.65
CCM2-209ENST00000477605 MMP8P22894 467 aa19.14■□□□□ 0.65
CCM2-209ENST00000477605 C1QTNF8P60827 252 aa19.14■□□□□ 0.65
CCM2-209ENST00000477605 CCDC142Q17RM4 750 aa19.14■□□□□ 0.65
CCM2-209ENST00000477605 P3H1Q32P28 736 aa19.14■□□□□ 0.65
CCM2-209ENST00000477605 SUPT20HL1Q3ZLR7 823 aa19.14■□□□□ 0.65
CCM2-209ENST00000477605 TBC1D1Q86TI0 1168 aaPredicted RBP19.14■□□□□ 0.65
CCM2-209ENST00000477605 CEP57Q86XR8 500 aa19.14■□□□□ 0.65
CCM2-209ENST00000477605 GIMAP7Q8NHV1 300 aa19.14■□□□□ 0.65
CCM2-209ENST00000477605 ATG4CQ96DT6 458 aa19.14■□□□□ 0.65
CCM2-209ENST00000477605 PORCNQ9H237 461 aa19.14■□□□□ 0.65
CCM2-209ENST00000477605 AGAP1Q9UPQ3 857 aa19.14■□□□□ 0.65
CCM2-209ENST00000477605 TMEM191CA6NGB0 347 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 RGS20O76081 388 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 TMEM191BP0C7N4 346 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 NF2P35240 595 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 VPS41P49754 854 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 ZNF132P52740 706 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 POLGP54098 1239 aaPredicted RBP19.13■□□□□ 0.65
CCM2-209ENST00000477605 RGS9BPQ6ZS82 235 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 PHLDB2Q86SQ0 1253 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 SRRM1Q8IYB3 904 aaKnown RBP19.13■□□□□ 0.65
CCM2-209ENST00000477605 REPS2Q8NFH8 660 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 ZNF518BQ9C0D4 1074 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 TMEM134Q9H6X4 195 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 DNAJC17Q9NVM6 304 aaKnown RBP19.13■□□□□ 0.65
CCM2-209ENST00000477605 LTBP3Q9NS15 1303 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 COL4A5P29400 1685 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 A0A0B4J269 797 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 RASA4BC9J798 803 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 K7ERI5 159 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 PRPF4O43172 522 aaKnown RBP eCLIP19.13■□□□□ 0.65
CCM2-209ENST00000477605 RASA4O43374 803 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 CETPP11597 493 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 CXCL9Q07325 125 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 GRM1Q13255 1194 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 MKRN4PQ13434 485 aaPredicted RBP19.13■□□□□ 0.65
CCM2-209ENST00000477605 MORF4L2Q15014 288 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 LMBRD2Q68DH5 695 aaPredicted RBP19.13■□□□□ 0.65
CCM2-209ENST00000477605 LLGL2Q6P1M3 1020 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 ALLCQ8N6M5 410 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 DEPTORQ8TB45 409 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 TCP11Q8WWU5 503 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 SLITRK1Q96PX8 696 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 PHACTR1Q9C0D0 580 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 ARHGEF3Q9NR81 526 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 DDX56Q9NY93 547 aaKnown RBP19.13■□□□□ 0.65
CCM2-209ENST00000477605 BAIAP2L1Q9UHR4 511 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 ADAMTS5Q9UNA0 930 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 SMG5Q9UPR3 1016 aaKnown RBP19.13■□□□□ 0.65
CCM2-209ENST00000477605 RIPK3Q9Y572 518 aa19.13■□□□□ 0.65
CCM2-209ENST00000477605 ATP2A1O14983 1001 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 CD58P19256 250 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 TAC1P20366 129 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 ARL2P36404 184 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 SSR1P43307 286 aaKnown RBP19.12■□□□□ 0.65
CCM2-209ENST00000477605 ACOT2P49753 483 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 NOP14P78316 857 aaKnown RBP19.12■□□□□ 0.65
CCM2-209ENST00000477605 SPOPLQ6IQ16 392 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 TRABD2AQ86V40 505 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 UBR7Q8N806 425 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 GDAP1Q8TB36 358 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 C9orf72Q96LT7 481 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 IMPG2Q9BZV3 1241 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 DHX33Q9H6R0 707 aaKnown RBP19.12■□□□□ 0.65
CCM2-209ENST00000477605 AS3MTQ9HBK9 375 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 USTQ9Y2C2 406 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 STARD13Q9Y3M8 1113 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 ZNFX1Q9P2E3 1918 aaKnown RBP19.12■□□□□ 0.65
CCM2-209ENST00000477605 KIF3CO14782 793 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 ATG7O95352 703 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 BACE1P56817 501 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 PTPRJQ12913 1337 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 MTERF2Q49AM1 385 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 C2CD6Q53TS8 623 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 TMEM63BQ5T3F8 832 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 PNMA8AQ86V59 439 aaPredicted RBP19.12■□□□□ 0.65
CCM2-209ENST00000477605 PASD1Q8IV76 773 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 NKD2Q969F2 451 aaPredicted RBP19.12■□□□□ 0.65
CCM2-209ENST00000477605 KLHL29Q96CT2 875 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 PWWP2AQ96N64 755 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 MSTO1Q9BUK6 570 aa19.12■□□□□ 0.65
CCM2-209ENST00000477605 FRMD8P1Q9BZ68 369 aaPredicted RBP19.12■□□□□ 0.65
CCM2-209ENST00000477605 MAFBQ9Y5Q3 323 aaPredicted RBP19.12■□□□□ 0.65
CCM2-209ENST00000477605 ADGRA2Q96PE1 1338 aa19.11■□□□□ 0.65
CCM2-209ENST00000477605 CNTNAP2Q9UHC6 1331 aa19.11■□□□□ 0.65
CCM2-209ENST00000477605 EXOC1LA0A1B0GW35 172 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms