RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 SERPINC1P01008 464 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 CST3P01034 146 aaPredicted RBP16.45■□□□□ 0.22
SEC13-215ENST00000477547 ODC1P11926 461 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 TNNC1P63316 161 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 PLCB3Q01970 1234 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 KRT17Q04695 432 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 GPM6BQ13491 265 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 TIGD5Q53EQ6 642 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 ZNF667Q5HYK9 610 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 FKBP15Q5T1M5 1219 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 SPOPLQ6IQ16 392 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 DSTYKQ6XUX3 929 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 SCARA5Q6ZMJ2 495 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 TAF4BQ92750 862 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 ELMO3Q96BJ8 720 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 SUSD3Q96L08 255 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 GPR62Q9BZJ7 368 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 INTS2Q9H0H0 1204 aaKnown RBP16.45■□□□□ 0.22
SEC13-215ENST00000477547 ALG13Q9NP73 1137 aaKnown RBP16.45■□□□□ 0.22
SEC13-215ENST00000477547 RAB20Q9NX57 234 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 COQ4Q9Y3A0 265 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 SNX9Q9Y5X1 595 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 GTPBP10A4D1E9 387 aaKnown RBP16.45■□□□□ 0.22
SEC13-215ENST00000477547 EPOPA6NHQ4 379 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 LRRN2O75325 713 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 PAX3P23760 479 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 FANCCQ00597 558 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 SGSM1Q2NKQ1 1148 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 FILIP1LQ4L180 1135 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 FAM171A1Q5VUB5 890 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.45■□□□□ 0.22
SEC13-215ENST00000477547 GBP6Q6ZN66 633 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 DDX53Q86TM3 631 aaKnown RBP16.45■□□□□ 0.22
SEC13-215ENST00000477547 RNF168Q8IYW5 571 aaPredicted RBP16.45■□□□□ 0.22
SEC13-215ENST00000477547 SENP8Q96LD8 212 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 CRACR2AQ9BSW2 395 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 NIF3L1Q9GZT8 377 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 VRTNQ9H8Y1 702 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 NXF1Q9UBU9 619 aaKnown RBP16.45■□□□□ 0.22
SEC13-215ENST00000477547 PCDHB8Q9UN66 801 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 LZTS1Q9Y250 596 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 PTPRDP23468 1912 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 ARHGEF37A1IGU5 675 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 H3BNC9 293 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 M0QZQ0 153 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 CYB561D2O14569 222 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 GRM6O15303 877 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 EFEMP2O95967 443 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 SOD2P04179 222 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 URODP06132 367 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 P4HA1P13674 534 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 TKTP29401 623 aaKnown RBP16.44■□□□□ 0.22
SEC13-215ENST00000477547 GLUD2P49448 558 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 UBE3AQ05086 875 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 EXOC3L4Q17RC7 722 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 WDR72Q3MJ13 1102 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 WDR44Q5JSH3 913 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 VPS52Q8N1B4 723 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 POF1BQ8WVV4 589 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 B3GALT6Q96L58 329 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 NT5C1BQ96P26 610 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 ZBP1Q9H171 429 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 APOBEC3GQ9HC16 384 aaKnown RBP16.44■□□□□ 0.22
SEC13-215ENST00000477547 ENTPD7Q9NQZ7 604 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 TLR9Q9NR96 1032 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 GDAP2Q9NXN4 497 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 STK39Q9UEW8 545 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 PUF60Q9UHX1 559 aaKnown RBP16.44■□□□□ 0.22
SEC13-215ENST00000477547 POLIQ9UNA4 740 aa16.44■□□□□ 0.22
SEC13-215ENST00000477547 MYO7AQ13402 2215 aa16.43■□□□□ 0.22
SEC13-215ENST00000477547 MYH10P35580 1976 aa16.43■□□□□ 0.22
SEC13-215ENST00000477547 MUC6Q6W4X9 2439 aa16.43■□□□□ 0.22
SEC13-215ENST00000477547 SYN3O14994 580 aa16.43■□□□□ 0.22
SEC13-215ENST00000477547 HUS1O60921 280 aa16.43■□□□□ 0.22
SEC13-215ENST00000477547 CA8P35219 290 aa16.43■□□□□ 0.22
SEC13-215ENST00000477547 LRMPQ12912 555 aa16.43■□□□□ 0.22
SEC13-215ENST00000477547 USP41Q3LFD5 358 aa16.43■□□□□ 0.22
SEC13-215ENST00000477547 KIAA1841Q6NSI8 718 aa16.43■□□□□ 0.22
SEC13-215ENST00000477547 TRIM65Q6PJ69 517 aa16.43■□□□□ 0.22
SEC13-215ENST00000477547 CEP57Q86XR8 500 aa16.43■□□□□ 0.22
SEC13-215ENST00000477547 SPPL3Q8TCT6 385 aa16.43■□□□□ 0.22
SEC13-215ENST00000477547 MMS19Q96T76 1030 aa16.43■□□□□ 0.22
SEC13-215ENST00000477547 TTPALQ9BTX7 342 aa16.43■□□□□ 0.22
SEC13-215ENST00000477547 SMYD3Q9H7B4 428 aa16.43■□□□□ 0.22
SEC13-215ENST00000477547 L1RE1Q9UN81 338 aa16.43■□□□□ 0.22
SEC13-215ENST00000477547 A0A1B0GTH6 734 aa16.42■□□□□ 0.22
SEC13-215ENST00000477547 LRRC10BA6NIK2 292 aa16.42■□□□□ 0.22
SEC13-215ENST00000477547 GPR37L1O60883 481 aa16.42■□□□□ 0.22
SEC13-215ENST00000477547 TYMPP19971 482 aa16.42■□□□□ 0.22
SEC13-215ENST00000477547 FGFR3P22607 806 aa16.42■□□□□ 0.22
SEC13-215ENST00000477547 DNAJB1P25685 340 aa16.42■□□□□ 0.22
SEC13-215ENST00000477547 ASPAP45381 313 aa16.42■□□□□ 0.22
SEC13-215ENST00000477547 RAP1GAPP47736 663 aa16.42■□□□□ 0.22
SEC13-215ENST00000477547 UBXN1Q04323 297 aa16.42■□□□□ 0.22
SEC13-215ENST00000477547 RTP2Q5QGT7 225 aa16.42■□□□□ 0.22
SEC13-215ENST00000477547 TAS1R1Q7RTX1 841 aa16.42■□□□□ 0.22
SEC13-215ENST00000477547 ADGRF2Q8IZF7 708 aa16.42■□□□□ 0.22
SEC13-215ENST00000477547 PDCL2Q8N4E4 241 aa16.42■□□□□ 0.22
SEC13-215ENST00000477547 TOP6BLQ8N6T0 577 aa16.42■□□□□ 0.22
SEC13-215ENST00000477547 APPL2Q8NEU8 664 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms