RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 LRG1P02750 347 aa19.44■□□□□ 0.7
VARS2-209ENST00000477288 TCN1P20061 433 aaPredicted RBP19.44■□□□□ 0.7
VARS2-209ENST00000477288 NLRP11P59045 1033 aaKnown RBP19.44■□□□□ 0.7
VARS2-209ENST00000477288 SNRNP35Q16560 246 aaKnown RBP19.44■□□□□ 0.7
VARS2-209ENST00000477288 C10orf120Q5SQS8 335 aa19.44■□□□□ 0.7
VARS2-209ENST00000477288 REEP2Q9BRK0 252 aa19.44■□□□□ 0.7
VARS2-209ENST00000477288 USE1Q9NZ43 259 aa19.44■□□□□ 0.7
VARS2-209ENST00000477288 APEX2Q9UBZ4 518 aa19.44■□□□□ 0.7
VARS2-209ENST00000477288 DYNC1I2Q13409 638 aaKnown RBP19.43■□□□□ 0.7
VARS2-209ENST00000477288 PSD3Q9NYI0 1048 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 WDR35Q9P2L0 1181 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 CYP2C19P33261 490 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 HPCAP84074 193 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 GUCY1A3Q02108 690 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 STAT4Q14765 748 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 HORMAD1Q86X24 394 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 IL1RL2Q9HB29 575 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 PSMD14O00487 310 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 NPTXRO95502 500 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 CDH2P19022 906 aaPredicted RBP19.43■□□□□ 0.7
VARS2-209ENST00000477288 MZF1P28698 734 aaPredicted RBP19.43■□□□□ 0.7
VARS2-209ENST00000477288 NCALDP61601 193 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 PWP1Q13610 501 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 DGKDQ16760 1214 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 GNASQ5JWF2 1037 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 CDC42EP5Q6NZY7 148 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 CATSPER1Q8NEC5 780 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 GPR63Q9BZJ6 419 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 EXOSC4Q9NPD3 245 aaKnown RBP19.43■□□□□ 0.7
VARS2-209ENST00000477288 C20orf96Q9NUD7 363 aaPredicted RBP19.43■□□□□ 0.7
VARS2-209ENST00000477288 V9GYQ6 96 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 PRR23AA6NEV1 266 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 SPATA21Q7Z572 469 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 BHMTQ93088 406 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 THAP11Q96EK4 314 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 CRAMP1Q96RY5 1269 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 CATSPERBQ9H7T0 1116 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 ZC3H7BQ9UGR2 993 aaKnown RBP19.43■□□□□ 0.7
VARS2-209ENST00000477288 PNPLA7Q6ZV29 1317 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 BCORL1Q5H9F3 1711 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 CETPP11597 493 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 S100A5P33763 92 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 GOLGA7BQ2TAP0 167 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 LVRNQ6Q4G3 990 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 SHC4Q6S5L8 630 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 UBA3Q8TBC4 463 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 MS4A14Q96JA4 679 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 LIMA1Q9UHB6 759 aaKnown RBP19.43■□□□□ 0.7
VARS2-209ENST00000477288 NAGPAQ9UK23 515 aa19.43■□□□□ 0.7
VARS2-209ENST00000477288 CSE1LP55060 971 aaKnown RBP19.42■□□□□ 0.7
VARS2-209ENST00000477288 PDIA5Q14554 519 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 ZRANB3Q5FWF4 1079 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 NUDT12Q9BQG2 462 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 IL18RAPO95256 599 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 RFC5P40937 340 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.42■□□□□ 0.7
VARS2-209ENST00000477288 IPMKQ8NFU5 416 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 SLC35G2Q8TBE7 412 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 GRAMD1AQ96CP6 724 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 MYL2P10916 166 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 RANBP1P43487 201 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 STX3Q13277 289 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 MKRN4PQ13434 485 aaPredicted RBP19.42■□□□□ 0.7
VARS2-209ENST00000477288 LONRF1Q17RB8 773 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 CHSY1Q86X52 802 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 DEAF1O75398 565 aaPredicted RBP19.42■□□□□ 0.7
VARS2-209ENST00000477288 LAMB3Q13751 1172 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 DCAF6Q58WW2 860 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 HES6Q96HZ4 224 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 NT5C1AQ9BXI3 368 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 MADDQ8WXG6 1647 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 CYTH3O43739 400 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 PCSK1P29120 753 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 GMPSP49915 693 aaPredicted RBP19.42■□□□□ 0.7
VARS2-209ENST00000477288 CPT1AP50416 773 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 LONP2Q86WA8 852 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 TRIM48Q8IWZ4 208 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 BRD8Q9H0E9 1235 aa19.42■□□□□ 0.7
VARS2-209ENST00000477288 SREBF2Q12772 1141 aa19.41■□□□□ 0.7
VARS2-209ENST00000477288 MFSD4BQ5TF39 518 aa19.41■□□□□ 0.7
VARS2-209ENST00000477288 CENPPQ6IPU0 288 aa19.41■□□□□ 0.7
VARS2-209ENST00000477288 ARHGAP18Q8N392 663 aa19.41■□□□□ 0.7
VARS2-209ENST00000477288 PRR12Q9ULL5 1215 aa19.41■□□□□ 0.7
VARS2-209ENST00000477288 SLC16A1P53985 500 aa19.41■□□□□ 0.7
VARS2-209ENST00000477288 TRIM28Q13263 835 aaKnown RBP19.41■□□□□ 0.7
VARS2-209ENST00000477288 DDX42Q86XP3 938 aaKnown RBP eCLIP19.41■□□□□ 0.7
VARS2-209ENST00000477288 ARHGEF26Q96DR7 871 aa19.41■□□□□ 0.7
VARS2-209ENST00000477288 SLC25A27O95847 323 aa19.41■□□□□ 0.7
VARS2-209ENST00000477288 HNRNPCP07910 306 aaKnown RBP eCLIP19.41■□□□□ 0.7
VARS2-209ENST00000477288 GTF3C2Q8WUA4 911 aaPredicted RBP19.41■□□□□ 0.7
VARS2-209ENST00000477288 FAM118BQ9BPY3 351 aa19.41■□□□□ 0.7
VARS2-209ENST00000477288 TRIM51Q9BSJ1 452 aa19.41■□□□□ 0.7
VARS2-209ENST00000477288 PRG3Q9Y2Y8 225 aaPredicted RBP19.41■□□□□ 0.7
VARS2-209ENST00000477288 ADGRG1Q9Y653 693 aa19.41■□□□□ 0.7
VARS2-209ENST00000477288 FAM107AO95990 144 aa19.41■□□□□ 0.7
VARS2-209ENST00000477288 OOSP2Q86WS3 158 aa19.41■□□□□ 0.7
VARS2-209ENST00000477288 C4orf33Q8N1A6 199 aa19.41■□□□□ 0.7
VARS2-209ENST00000477288 DIS3LQ8TF46 1054 aaKnown RBP19.41■□□□□ 0.7
VARS2-209ENST00000477288 KDM6AO15550 1401 aaPredicted RBP19.41■□□□□ 0.7
VARS2-209ENST00000477288 CFAP73A6NFT4 308 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms