RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 ACAD10Q6JQN1 1059 aa15.43■□□□□ 0.06
COL4A6-206ENST00000477085 LRRC8DQ7L1W4 858 aa15.43■□□□□ 0.06
COL4A6-206ENST00000477085 ZNF598Q86UK7 904 aaKnown RBP15.43■□□□□ 0.06
COL4A6-206ENST00000477085 PASD1Q8IV76 773 aa15.43■□□□□ 0.06
COL4A6-206ENST00000477085 TXLNBQ8N3L3 684 aa15.43■□□□□ 0.06
COL4A6-206ENST00000477085 LRRC52Q8N7C0 313 aa15.43■□□□□ 0.06
COL4A6-206ENST00000477085 SLC4A11Q8NBS3 891 aa15.43■□□□□ 0.06
COL4A6-206ENST00000477085 LRRN4CLQ8ND94 238 aa15.43■□□□□ 0.06
COL4A6-206ENST00000477085 CPA5Q8WXQ8 436 aa15.43■□□□□ 0.06
COL4A6-206ENST00000477085 NOX5Q96PH1 765 aa15.43■□□□□ 0.06
COL4A6-206ENST00000477085 NAPGQ99747 312 aaPredicted RBP15.43■□□□□ 0.06
COL4A6-206ENST00000477085 CYP3A43Q9HB55 503 aa15.43■□□□□ 0.06
COL4A6-206ENST00000477085 COG5Q9UP83 839 aa15.43■□□□□ 0.06
COL4A6-206ENST00000477085 PCDHGC5Q9Y5F6 944 aa15.43■□□□□ 0.06
COL4A6-206ENST00000477085 PDCD11Q14690 1871 aaKnown RBP15.43■□□□□ 0.06
COL4A6-206ENST00000477085 A0A0A6YYK5 440 aaPredicted RBP15.42■□□□□ 0.06
COL4A6-206ENST00000477085 THAP12O43422 761 aa15.42■□□□□ 0.06
COL4A6-206ENST00000477085 PQBP1O60828 265 aaKnown RBP15.42■□□□□ 0.06
COL4A6-206ENST00000477085 SELPP16109 830 aa15.42■□□□□ 0.06
COL4A6-206ENST00000477085 SLC39A5Q6ZMH5 540 aa15.42■□□□□ 0.06
COL4A6-206ENST00000477085 TRIM58Q8NG06 486 aa15.42■□□□□ 0.06
COL4A6-206ENST00000477085 SLC35G2Q8TBE7 412 aa15.42■□□□□ 0.06
COL4A6-206ENST00000477085 CAGE1Q8TC20 777 aa15.42■□□□□ 0.06
COL4A6-206ENST00000477085 DIS3LQ8TF46 1054 aaKnown RBP15.42■□□□□ 0.06
COL4A6-206ENST00000477085 MRPL45Q9BRJ2 306 aaKnown RBP15.42■□□□□ 0.06
COL4A6-206ENST00000477085 SEZ6LQ9BYH1 1024 aa15.42■□□□□ 0.06
COL4A6-206ENST00000477085 GOLPH3Q9H4A6 298 aa15.42■□□□□ 0.06
COL4A6-206ENST00000477085 GIT1Q9Y2X7 761 aa15.42■□□□□ 0.06
COL4A6-206ENST00000477085 SNX9Q9Y5X1 595 aa15.42■□□□□ 0.06
COL4A6-206ENST00000477085 NCANO14594 1321 aa15.42■□□□□ 0.06
COL4A6-206ENST00000477085 TACC1O75410 805 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 IBSPP21815 317 aaPredicted RBP15.41■□□□□ 0.06
COL4A6-206ENST00000477085 LRPAP1P30533 357 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 LBX1P52954 281 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 NAP1L1P55209 391 aaKnown RBP15.41■□□□□ 0.06
COL4A6-206ENST00000477085 INCA1Q0VD86 236 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 MYO1EQ12965 1108 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 SOWAHAQ2M3V2 549 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 TCTN1Q2MV58 587 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 FBXO46Q6PJ61 603 aaPredicted RBP15.41■□□□□ 0.06
COL4A6-206ENST00000477085 ECHDC2Q86YB7 292 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 WDTC1Q8N5D0 677 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 LRRC57Q8N9N7 239 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 TPCN2Q8NHX9 752 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 MMS19Q96T76 1030 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 RGS18Q9NS28 235 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 PUF60Q9UHX1 559 aaKnown RBP15.41■□□□□ 0.06
COL4A6-206ENST00000477085 MRFAP1Q9Y605 127 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 SCN1AP35498 2009 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 C9IYK1 514 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 TLR3O15455 904 aaKnown RBP15.41■□□□□ 0.06
COL4A6-206ENST00000477085 ATMINO43313 823 aaPredicted RBP15.41■□□□□ 0.06
COL4A6-206ENST00000477085 NCK2O43639 380 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 COL6A1P12109 1028 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 SCNN1GP51170 649 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 NDST1P52848 882 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 TNNC1P63316 161 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 NOMO3P69849 1222 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 GPC5P78333 572 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 C2CD6Q53TS8 623 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 NAA35Q5VZE5 725 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 PAPD7Q5XG87 772 aaKnown RBP15.41■□□□□ 0.06
COL4A6-206ENST00000477085 ANKRD33Q7Z3H0 272 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 RNF169Q8NCN4 708 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 CTNNBL1Q8WYA6 563 aaPredicted RBP15.41■□□□□ 0.06
COL4A6-206ENST00000477085 ARMC5Q96C12 935 aa15.41■□□□□ 0.06
COL4A6-206ENST00000477085 HCRTO43612 131 aa15.4■□□□□ 0.06
COL4A6-206ENST00000477085 SRGAP2O75044 1071 aa15.4■□□□□ 0.06
COL4A6-206ENST00000477085 FGFR1P11362 822 aa15.4■□□□□ 0.06
COL4A6-206ENST00000477085 P4HA1P13674 534 aa15.4■□□□□ 0.06
COL4A6-206ENST00000477085 NOP2P46087 812 aaKnown RBP15.4■□□□□ 0.06
COL4A6-206ENST00000477085 RAB27AP51159 221 aa15.4■□□□□ 0.06
COL4A6-206ENST00000477085 LILRA4P59901 499 aa15.4■□□□□ 0.06
COL4A6-206ENST00000477085 YWHAEP62258 255 aaKnown RBP15.4■□□□□ 0.06
COL4A6-206ENST00000477085 FAM189BP81408 668 aa15.4■□□□□ 0.06
COL4A6-206ENST00000477085 CENPCQ03188 943 aa15.4■□□□□ 0.06
COL4A6-206ENST00000477085 FAAP100Q0VG06 881 aa15.4■□□□□ 0.06
COL4A6-206ENST00000477085 PTP4A2Q12974 167 aa15.4■□□□□ 0.06
COL4A6-206ENST00000477085 TCEAL1Q15170 157 aa15.4■□□□□ 0.06
COL4A6-206ENST00000477085 SMYD5Q6GMV2 418 aa15.4■□□□□ 0.06
COL4A6-206ENST00000477085 LLGL2Q6P1M3 1020 aa15.4■□□□□ 0.06
COL4A6-206ENST00000477085 LIMS2Q7Z4I7 341 aa15.4■□□□□ 0.06
COL4A6-206ENST00000477085 MYRIPQ8NFW9 859 aa15.4■□□□□ 0.06
COL4A6-206ENST00000477085 RFFLQ8WZ73 363 aa15.4■□□□□ 0.06
COL4A6-206ENST00000477085 RABGGTAQ92696 567 aa15.4■□□□□ 0.06
COL4A6-206ENST00000477085 TMEM176AQ96HP8 235 aa15.4■□□□□ 0.06
COL4A6-206ENST00000477085 PAAF1Q9BRP4 392 aa15.4■□□□□ 0.06
COL4A6-206ENST00000477085 TLR10Q9BXR5 811 aa15.4■□□□□ 0.06
COL4A6-206ENST00000477085 BARX2Q9UMQ3 279 aaPredicted RBP15.4■□□□□ 0.06
COL4A6-206ENST00000477085 JRKLQ9Y4A0 524 aa15.4■□□□□ 0.06
COL4A6-206ENST00000477085 KPNA7A9QM74 516 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 FTCDO95954 541 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 CYP1A2P05177 515 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 THP07101 528 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 PAEPP09466 180 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 DENND1BQ6P3S1 775 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 SLFN11Q7Z7L1 901 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 HACE1Q8IYU2 909 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 MCOLN2Q8IZK6 566 aa15.39■□□□□ 0.05
COL4A6-206ENST00000477085 KBTBD7Q8WVZ9 684 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms