RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 USHBP1Q8N6Y0 703 aa7.68□□□□□ -1.18
LRCH3-215ENST00000476664 TDRD7Q8NHU6 1098 aaKnown RBP7.68□□□□□ -1.18
LRCH3-215ENST00000476664 MPHOSPH8Q99549 860 aa7.68□□□□□ -1.18
LRCH3-215ENST00000476664 SENP2Q9HC62 589 aa7.68□□□□□ -1.18
LRCH3-215ENST00000476664 NECTIN3Q9NQS3 549 aa7.68□□□□□ -1.18
LRCH3-215ENST00000476664 ZC3H7BQ9UGR2 993 aaKnown RBP7.68□□□□□ -1.18
LRCH3-215ENST00000476664 FEZ2Q9UHY8 353 aaPredicted RBP7.68□□□□□ -1.18
LRCH3-215ENST00000476664 CPA4Q9UI42 421 aa7.68□□□□□ -1.18
LRCH3-215ENST00000476664 PCDHA13Q9Y5I0 950 aa7.68□□□□□ -1.18
LRCH3-215ENST00000476664 ROCK1Q13464 1354 aa7.68□□□□□ -1.18
LRCH3-215ENST00000476664 AQP12BA6NM10 295 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 GAS2O43903 313 aaKnown RBP7.67□□□□□ -1.18
LRCH3-215ENST00000476664 PPFIA3O75145 1194 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 DGAT1O75907 488 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 RTN3O95197 1032 aaPredicted RBP7.67□□□□□ -1.18
LRCH3-215ENST00000476664 DNTTP04053 509 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 ITGA5P08648 1049 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 AKR1B1P15121 316 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 GPR15P49685 360 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 RNASE9P60153 205 aaKnown RBP7.67□□□□□ -1.18
LRCH3-215ENST00000476664 HTRA4P83105 476 aaPredicted RBP7.67□□□□□ -1.18
LRCH3-215ENST00000476664 UBE3AQ05086 875 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 CST9Q5W186 159 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 CHSY3Q70JA7 882 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.67□□□□□ -1.18
LRCH3-215ENST00000476664 KANSL1Q7Z3B3 1105 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.67□□□□□ -1.18
LRCH3-215ENST00000476664 LZTR1Q8N653 840 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 HIPK4Q8NE63 616 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 NMD3Q96D46 503 aaKnown RBP7.67□□□□□ -1.18
LRCH3-215ENST00000476664 EID2BQ96D98 161 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 FAM122AQ96E09 287 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 PKNOX2Q96KN3 472 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 GBP4Q96PP9 640 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 KCNC2Q96PR1 638 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 ASB2Q96Q27 587 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 FOXP3Q9BZS1 431 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 MRPL18Q9H0U6 180 aaKnown RBP7.67□□□□□ -1.18
LRCH3-215ENST00000476664 TMEM8AQ9HCN3 771 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 SACM1LQ9NTJ5 587 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 ARGLU1Q9NWB6 273 aaPredicted RBP7.67□□□□□ -1.18
LRCH3-215ENST00000476664 GIMAP2Q9UG22 337 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 SCOCQ9UIL1 159 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 PCDHA3Q9Y5H8 950 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 MYPNQ86TC9 1320 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 CNTNAP4Q9C0A0 1308 aa7.67□□□□□ -1.18
LRCH3-215ENST00000476664 LAMB4A4D0S4 1761 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 FER1L6Q2WGJ9 1857 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 A0A0B4J269 797 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 FAM90A27PA6NNH2 459 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 CLCA1A8K7I4 914 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 SART1O43290 800 aaKnown RBP7.66□□□□□ -1.18
LRCH3-215ENST00000476664 TMEM127O75204 238 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 TADA3O75528 432 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 INMTO95050 263 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 NFICP08651 508 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 MYL4P12829 197 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 CHMP24386 653 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 CTSSP25774 331 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 CLK1P49759 484 aaKnown RBP7.66□□□□□ -1.18
LRCH3-215ENST00000476664 CASP6P55212 293 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 ARF3P61204 181 aaPredicted RBP7.66□□□□□ -1.18
LRCH3-215ENST00000476664 RAC1P63000 192 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 ARF1P84077 181 aaKnown RBP7.66□□□□□ -1.18
LRCH3-215ENST00000476664 ROM1Q03395 351 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 GAS6Q14393 721 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 MYBPC3Q14896 1274 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 DLGAP5Q15398 846 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 RAB30Q15771 203 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 CCDC178Q5BJE1 867 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 UBXN11Q5T124 520 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 TRAPPC3LQ5T215 181 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 HLA-DQA1Q5Y7H0 255 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 HAUS3Q68CZ6 603 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 SULT6B1Q6IMI4 303 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 KRT74Q7RTS7 529 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 CILP2Q8IUL8 1156 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 ADGRG2Q8IZP9 1017 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 MFSD4AQ8N468 514 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 SH2D3CQ8N5H7 860 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 BRIX1Q8TDN6 353 aaKnown RBP7.66□□□□□ -1.18
LRCH3-215ENST00000476664 OTUD7AQ8TE49 926 aaPredicted RBP7.66□□□□□ -1.18
LRCH3-215ENST00000476664 ASB15Q8WXK1 588 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 ATP2A3Q93084 1043 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 FOXRED1Q96CU9 486 aaPredicted RBP7.66□□□□□ -1.18
LRCH3-215ENST00000476664 CLPTM1LQ96KA5 538 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 SAMD11Q96NU1 681 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 PDCD2LQ9BRP1 358 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 DUSP23Q9BVJ7 150 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 KATNAL1Q9BW62 490 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 SEPSECSQ9HD40 501 aaKnown RBP7.66□□□□□ -1.18
LRCH3-215ENST00000476664 KRT84Q9NSB2 600 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 GJB4Q9NTQ9 266 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 RBM12Q9NTZ6 932 aaKnown RBP7.66□□□□□ -1.18
LRCH3-215ENST00000476664 MRGBPQ9NV56 204 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.66□□□□□ -1.18
LRCH3-215ENST00000476664 ZSWIM5Q9P217 1185 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 COL20A1Q9P218 1284 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 ABCF2Q9UG63 623 aa7.66□□□□□ -1.18
LRCH3-215ENST00000476664 SRP68Q9UHB9 627 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms