RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 TRPV4Q9HBA0 871 aa13.06□□□□□ -0.32
HDAC6-219ENST00000476625 TRPV5Q9NQA5 729 aa13.06□□□□□ -0.32
HDAC6-219ENST00000476625 MAP1BP46821 2468 aaKnown RBP13.06□□□□□ -0.32
HDAC6-219ENST00000476625 MTMR11A4FU01 709 aa13.05□□□□□ -0.32
HDAC6-219ENST00000476625 SDHBP21912 280 aa13.05□□□□□ -0.32
HDAC6-219ENST00000476625 U2AF2P26368 475 aaKnown RBP eCLIP13.05□□□□□ -0.32
HDAC6-219ENST00000476625 RPL9P32969 192 aaKnown RBP13.05□□□□□ -0.32
HDAC6-219ENST00000476625 NRLP54845 237 aa13.05□□□□□ -0.32
HDAC6-219ENST00000476625 YWHAHQ04917 246 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-219ENST00000476625 DMP1Q13316 513 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-219ENST00000476625 NOLC1Q14978 699 aaKnown RBP eCLIP13.05□□□□□ -0.32
HDAC6-219ENST00000476625 CSRP2Q16527 193 aa13.05□□□□□ -0.32
HDAC6-219ENST00000476625 GPR158Q5T848 1215 aa13.05□□□□□ -0.32
HDAC6-219ENST00000476625 N4BP2L1Q5TBK1 243 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-219ENST00000476625 TCEAL6Q6IPX3 200 aa13.05□□□□□ -0.32
HDAC6-219ENST00000476625 C1orf186Q6ZWK4 172 aa13.05□□□□□ -0.32
HDAC6-219ENST00000476625 LONP2Q86WA8 852 aa13.05□□□□□ -0.32
HDAC6-219ENST00000476625 SPEM1Q8N4L4 309 aa13.05□□□□□ -0.32
HDAC6-219ENST00000476625 OR10T2Q8NGX3 314 aa13.05□□□□□ -0.32
HDAC6-219ENST00000476625 RIN3Q8TB24 985 aa13.05□□□□□ -0.32
HDAC6-219ENST00000476625 TCEAL3Q969E4 200 aa13.05□□□□□ -0.32
HDAC6-219ENST00000476625 KIF12Q96FN5 646 aa13.05□□□□□ -0.32
HDAC6-219ENST00000476625 PNMA5Q96PV4 448 aa13.05□□□□□ -0.32
HDAC6-219ENST00000476625 F5P12259 2224 aa13.04□□□□□ -0.32
HDAC6-219ENST00000476625 MYBPHLA2RUH7 354 aa13.04□□□□□ -0.32
HDAC6-219ENST00000476625 ANTXRLA6NF34 631 aa13.04□□□□□ -0.32
HDAC6-219ENST00000476625 OTOL1A6NHN0 477 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-219ENST00000476625 LACTBL1A8MY62 500 aa13.04□□□□□ -0.32
HDAC6-219ENST00000476625 M0QZQ0 153 aa13.04□□□□□ -0.32
HDAC6-219ENST00000476625 CHADO15335 359 aa13.04□□□□□ -0.32
HDAC6-219ENST00000476625 GABRR2P28476 465 aa13.04□□□□□ -0.32
HDAC6-219ENST00000476625 MATR3P43243 847 aaKnown RBP eCLIP13.04□□□□□ -0.32
HDAC6-219ENST00000476625 FCHO2Q0JRZ9 810 aa13.04□□□□□ -0.32
HDAC6-219ENST00000476625 SAFBQ15424 915 aaKnown RBP eCLIP13.04□□□□□ -0.32
HDAC6-219ENST00000476625 TRIM68Q6AZZ1 485 aa13.04□□□□□ -0.32
HDAC6-219ENST00000476625 CENPPQ6IPU0 288 aa13.04□□□□□ -0.32
HDAC6-219ENST00000476625 CEP68Q76N32 757 aa13.04□□□□□ -0.32
HDAC6-219ENST00000476625 APBB1IPQ7Z5R6 666 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-219ENST00000476625 KBTBD6Q86V97 674 aa13.04□□□□□ -0.32
HDAC6-219ENST00000476625 IGSF22Q8N9C0 903 aa13.04□□□□□ -0.32
HDAC6-219ENST00000476625 TMEM161BQ8NDZ6 487 aa13.04□□□□□ -0.32
HDAC6-219ENST00000476625 LRRC15Q8TF66 581 aa13.04□□□□□ -0.32
HDAC6-219ENST00000476625 BORCS6Q96GS4 357 aa13.04□□□□□ -0.32
HDAC6-219ENST00000476625 IKZF4Q9H2S9 585 aa13.04□□□□□ -0.32
HDAC6-219ENST00000476625 ATXN3LQ9H3M9 355 aa13.04□□□□□ -0.32
HDAC6-219ENST00000476625 TTC26A0AVF1 554 aa13.03□□□□□ -0.32
HDAC6-219ENST00000476625 MAPTP10636 758 aaKnown RBP13.03□□□□□ -0.32
HDAC6-219ENST00000476625 ATF6P18850 670 aa13.03□□□□□ -0.32
HDAC6-219ENST00000476625 MARCKSP29966 332 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-219ENST00000476625 NMT1P30419 496 aaKnown RBP13.03□□□□□ -0.32
HDAC6-219ENST00000476625 ANAPC15P60006 121 aa13.03□□□□□ -0.32
HDAC6-219ENST00000476625 PLD1Q13393 1074 aa13.03□□□□□ -0.32
HDAC6-219ENST00000476625 CCINQ13939 588 aa13.03□□□□□ -0.32
HDAC6-219ENST00000476625 LRRC32Q14392 662 aa13.03□□□□□ -0.32
HDAC6-219ENST00000476625 PPP2R5DQ14738 602 aa13.03□□□□□ -0.32
HDAC6-219ENST00000476625 AASDHQ4L235 1098 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-219ENST00000476625 DSTYKQ6XUX3 929 aa13.03□□□□□ -0.32
HDAC6-219ENST00000476625 MAMSTRQ6ZN01 415 aa13.03□□□□□ -0.32
HDAC6-219ENST00000476625 DNAJB7Q7Z6W7 309 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-219ENST00000476625 APPL2Q8NEU8 664 aa13.03□□□□□ -0.32
HDAC6-219ENST00000476625 GIPC2Q8TF65 315 aa13.03□□□□□ -0.32
HDAC6-219ENST00000476625 FOXP1Q9H334 677 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-219ENST00000476625 IL21Q9HBE4 155 aa13.03□□□□□ -0.32
HDAC6-219ENST00000476625 CCL26Q9Y258 94 aa13.03□□□□□ -0.32
HDAC6-219ENST00000476625 TISP43B9A030 160 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 FAM189A1O60320 539 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 TOM1L1O75674 476 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 OAZ2O95190 189 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 NFICP08651 508 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 MUTP22033 750 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 LRPAP1P30533 357 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 AARSP49588 968 aaKnown RBP eCLIP13.02□□□□□ -0.33
HDAC6-219ENST00000476625 GPR15P49685 360 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 EPHB3P54753 998 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 GPR17Q13304 367 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 ZBTB6Q15916 424 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 ENOX2Q16206 610 aaKnown RBP13.02□□□□□ -0.33
HDAC6-219ENST00000476625 SLC39A12Q504Y0 691 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 SCARA3Q6AZY7 606 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 OVOS1Q6IE37 1185 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 FSTL4Q6MZW2 842 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 WDR5BQ86VZ2 330 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 FBXO18Q8NFZ0 1043 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 FAM212AQ96EL1 285 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 FAM84AQ96KN4 292 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 DRC1Q96MC2 740 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 HHIPQ96QV1 700 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 SEPT5Q99719 369 aaPredicted RBP13.02□□□□□ -0.33
HDAC6-219ENST00000476625 IER2Q9BTL4 223 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 FBRSL1Q9HCM7 1045 aaKnown RBP13.02□□□□□ -0.33
HDAC6-219ENST00000476625 HPS4Q9NQG7 708 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 DNM3Q9UQ16 869 aa13.02□□□□□ -0.33
HDAC6-219ENST00000476625 HELZP42694 1942 aaKnown RBP13.01□□□□□ -0.33
HDAC6-219ENST00000476625 SPAG17Q6Q759 2223 aa13.01□□□□□ -0.33
HDAC6-219ENST00000476625 DCLK1O15075 740 aa13.01□□□□□ -0.33
HDAC6-219ENST00000476625 PAPSS2O95340 614 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-219ENST00000476625 EGFP01133 1207 aa13.01□□□□□ -0.33
HDAC6-219ENST00000476625 ARSAP15289 507 aa13.01□□□□□ -0.33
HDAC6-219ENST00000476625 MCL1Q07820 350 aa13.01□□□□□ -0.33
HDAC6-219ENST00000476625 STRN3Q13033 797 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms