RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 TSPY1Q01534 308 aa11.02□□□□□ -0.65
CCM2-208ENST00000476594 ADCY1Q08828 1119 aa11.02□□□□□ -0.65
CCM2-208ENST00000476594 GPR17Q13304 367 aa11.02□□□□□ -0.65
CCM2-208ENST00000476594 VEPH1Q14D04 833 aa11.02□□□□□ -0.65
CCM2-208ENST00000476594 CRELD2Q6UXH1 353 aaPredicted RBP11.02□□□□□ -0.65
CCM2-208ENST00000476594 RSPO2Q6UXX9 243 aaPredicted RBP11.02□□□□□ -0.65
CCM2-208ENST00000476594 HFE2Q6ZVN8 426 aa11.02□□□□□ -0.65
CCM2-208ENST00000476594 PDZD4Q76G19 769 aaPredicted RBP11.02□□□□□ -0.65
CCM2-208ENST00000476594 DCP1BQ8IZD4 617 aaKnown RBP11.02□□□□□ -0.65
CCM2-208ENST00000476594 TMEM86AQ8N2M4 240 aa11.02□□□□□ -0.65
CCM2-208ENST00000476594 FBXL6Q8N531 539 aa11.02□□□□□ -0.65
CCM2-208ENST00000476594 XXYLT1Q8NBI6 393 aa11.02□□□□□ -0.65
CCM2-208ENST00000476594 SPATA18Q8TC71 538 aa11.02□□□□□ -0.65
CCM2-208ENST00000476594 C2orf15Q8WU43 125 aaKnown RBP11.02□□□□□ -0.65
CCM2-208ENST00000476594 BLZF1Q9H2G9 400 aa11.02□□□□□ -0.65
CCM2-208ENST00000476594 AVENQ9NQS1 362 aaPredicted RBP11.02□□□□□ -0.65
CCM2-208ENST00000476594 ASAH2Q9NR71 780 aa11.02□□□□□ -0.65
CCM2-208ENST00000476594 HSFX1Q9UBD0 423 aa11.02□□□□□ -0.65
CCM2-208ENST00000476594 SERTAD1Q9UHV2 236 aa11.02□□□□□ -0.65
CCM2-208ENST00000476594 DUSP12Q9UNI6 340 aa11.02□□□□□ -0.65
CCM2-208ENST00000476594 C2orf16Q68DN1 1984 aa11.02□□□□□ -0.65
CCM2-208ENST00000476594 GOLGA8IPA6NC78 632 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 GOLGA8JA6NMD2 632 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 FGF19O95750 216 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 ITGB3P05106 788 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 RHOP08100 348 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 IGFBP6P24592 240 aaPredicted RBP11.01□□□□□ -0.65
CCM2-208ENST00000476594 POLR2BP30876 1174 aaKnown RBP11.01□□□□□ -0.65
CCM2-208ENST00000476594 TUFMP49411 452 aaKnown RBP11.01□□□□□ -0.65
CCM2-208ENST00000476594 NUBP1P53384 320 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 EPHB3P54753 998 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 MYL7Q01449 175 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 CUL4BQ13620 913 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 TAF12Q16514 161 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 SNRNP35Q16560 246 aaKnown RBP11.01□□□□□ -0.65
CCM2-208ENST00000476594 KNOP1Q1ED39 458 aaKnown RBP11.01□□□□□ -0.65
CCM2-208ENST00000476594 DUOXA2Q1HG44 320 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 BMT2Q1RMZ1 405 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 EPM2AIP1Q7L775 607 aaPredicted RBP11.01□□□□□ -0.65
CCM2-208ENST00000476594 ITIH5Q86UX2 942 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 WDR49Q8IV35 697 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 NELFCDQ8IXH7 590 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 EFCAB13Q8IY85 973 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 CSGALNACT2Q8N6G5 542 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 FSIP1Q8NA03 581 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 PAGE5Q96GU1 130 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 MYADMQ96S97 322 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 IRF2BPLQ9H1B7 796 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 SLC39A2Q9NP94 309 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 AGPAT3Q9NRZ7 376 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 GDE1Q9NZC3 331 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 HOOK1Q9UJC3 728 aaKnown RBP11.01□□□□□ -0.65
CCM2-208ENST00000476594 AGAP1Q9UPQ3 857 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 ASB3Q9Y575 518 aa11.01□□□□□ -0.65
CCM2-208ENST00000476594 TIMM13Q9Y5L4 95 aaPredicted RBP11.01□□□□□ -0.65
CCM2-208ENST00000476594 PPEF2O14830 753 aa11□□□□□ -0.65
CCM2-208ENST00000476594 ACTN4O43707 911 aaKnown RBP11□□□□□ -0.65
CCM2-208ENST00000476594 EXOC3O60645 756 aa11□□□□□ -0.65
CCM2-208ENST00000476594 MICAL2O94851 1124 aa11□□□□□ -0.65
CCM2-208ENST00000476594 SRFP11831 508 aa11□□□□□ -0.65
CCM2-208ENST00000476594 TNNI1P19237 187 aa11□□□□□ -0.65
CCM2-208ENST00000476594 CYP2J2P51589 502 aa11□□□□□ -0.65
CCM2-208ENST00000476594 AP3M2P53677 418 aa11□□□□□ -0.65
CCM2-208ENST00000476594 PFKPQ01813 784 aa11□□□□□ -0.65
CCM2-208ENST00000476594 EHHADHQ08426 723 aa11□□□□□ -0.65
CCM2-208ENST00000476594 TWF1Q12792 350 aa11□□□□□ -0.65
CCM2-208ENST00000476594 BFSP1Q12934 665 aa11□□□□□ -0.65
CCM2-208ENST00000476594 NFE2Q16621 373 aaPredicted RBP11□□□□□ -0.65
CCM2-208ENST00000476594 RNF19BQ6ZMZ0 732 aa11□□□□□ -0.65
CCM2-208ENST00000476594 C12orf56Q8IXR9 622 aa11□□□□□ -0.65
CCM2-208ENST00000476594 SPPL2BQ8TCT7 592 aa11□□□□□ -0.65
CCM2-208ENST00000476594 SCFD1Q8WVM8 642 aa11□□□□□ -0.65
CCM2-208ENST00000476594 FGF13Q92913 245 aa11□□□□□ -0.65
CCM2-208ENST00000476594 FAM122AQ96E09 287 aa11□□□□□ -0.65
CCM2-208ENST00000476594 ASIC4Q96FT7 647 aa11□□□□□ -0.65
CCM2-208ENST00000476594 GCNAQ96QF7 691 aa11□□□□□ -0.65
CCM2-208ENST00000476594 CORO1BQ9BR76 489 aa11□□□□□ -0.65
CCM2-208ENST00000476594 FGFBP2Q9BYJ0 223 aa11□□□□□ -0.65
CCM2-208ENST00000476594 GTPBP4Q9BZE4 634 aaKnown RBP11□□□□□ -0.65
CCM2-208ENST00000476594 GPR88Q9GZN0 384 aa11□□□□□ -0.65
CCM2-208ENST00000476594 IKZF4Q9H2S9 585 aa11□□□□□ -0.65
CCM2-208ENST00000476594 PDE11AQ9HCR9 933 aa11□□□□□ -0.65
CCM2-208ENST00000476594 INTS13Q9NVM9 706 aa11□□□□□ -0.65
CCM2-208ENST00000476594 DNMT3BQ9UBC3 853 aaKnown RBP11□□□□□ -0.65
CCM2-208ENST00000476594 HPSEQ9Y251 543 aa11□□□□□ -0.65
CCM2-208ENST00000476594 ZDHHC9Q9Y397 364 aa11□□□□□ -0.65
CCM2-208ENST00000476594 YIPF1Q9Y548 306 aa11□□□□□ -0.65
CCM2-208ENST00000476594 TECTAO75443 2155 aa11□□□□□ -0.65
CCM2-208ENST00000476594 FAM237AA0A1B0GTK4 181 aa10.99□□□□□ -0.65
CCM2-208ENST00000476594 CLIC2O15247 247 aa10.99□□□□□ -0.65
CCM2-208ENST00000476594 CALUO43852 315 aaPredicted RBP10.99□□□□□ -0.65
CCM2-208ENST00000476594 N4BP1O75113 896 aaKnown RBP10.99□□□□□ -0.65
CCM2-208ENST00000476594 CLSTN1O94985 981 aa10.99□□□□□ -0.65
CCM2-208ENST00000476594 DLATP10515 647 aaKnown RBP10.99□□□□□ -0.65
CCM2-208ENST00000476594 PCSK1P29120 753 aa10.99□□□□□ -0.65
CCM2-208ENST00000476594 LHX1P48742 406 aa10.99□□□□□ -0.65
CCM2-208ENST00000476594 TRPC3Q13507 836 aa10.99□□□□□ -0.65
CCM2-208ENST00000476594 KMT5BQ4FZB7 885 aa10.99□□□□□ -0.65
CCM2-208ENST00000476594 SLC39A12Q504Y0 691 aa10.99□□□□□ -0.65
CCM2-208ENST00000476594 DPH6Q7L8W6 267 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms