RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 MFSD6LQ8IWD5 586 aa14.25□□□□□ -0.13
MRPL55-228ENST00000476267 BICD1Q96G01 975 aa14.25□□□□□ -0.13
MRPL55-228ENST00000476267 CDK5RAP3Q96JB5 506 aa14.25□□□□□ -0.13
MRPL55-228ENST00000476267 PGLYRP2Q96PD5 576 aa14.25□□□□□ -0.13
MRPL55-228ENST00000476267 TMEM209Q96SK2 561 aa14.25□□□□□ -0.13
MRPL55-228ENST00000476267 GPR88Q9GZN0 384 aa14.25□□□□□ -0.13
MRPL55-228ENST00000476267 PIAS3Q9Y6X2 628 aa14.25□□□□□ -0.13
MRPL55-228ENST00000476267 PTPRZ1P23471 2315 aaPredicted RBP14.24□□□□□ -0.13
MRPL55-228ENST00000476267 A0A1W2PRU2 124 aa14.24□□□□□ -0.13
MRPL55-228ENST00000476267 MED19A0JLT2 244 aaPredicted RBP14.24□□□□□ -0.13
MRPL55-228ENST00000476267 ANO9A1A5B4 782 aa14.24□□□□□ -0.13
MRPL55-228ENST00000476267 HEPACAM2A8MVW5 462 aa14.24□□□□□ -0.13
MRPL55-228ENST00000476267 K7ENM7 598 aa14.24□□□□□ -0.13
MRPL55-228ENST00000476267 PIRO00625 290 aa14.24□□□□□ -0.13
MRPL55-228ENST00000476267 NFICP08651 508 aa14.24□□□□□ -0.13
MRPL55-228ENST00000476267 TGM1P22735 817 aa14.24□□□□□ -0.13
MRPL55-228ENST00000476267 MATR3P43243 847 aaKnown RBP eCLIP14.24□□□□□ -0.13
MRPL55-228ENST00000476267 DUSP4Q13115 394 aa14.24□□□□□ -0.13
MRPL55-228ENST00000476267 PLD1Q13393 1074 aa14.24□□□□□ -0.13
MRPL55-228ENST00000476267 GAS6Q14393 721 aa14.24□□□□□ -0.13
MRPL55-228ENST00000476267 STXBP5Q5T5C0 1151 aa14.24□□□□□ -0.13
MRPL55-228ENST00000476267 OVOS1Q6IE37 1185 aa14.24□□□□□ -0.13
MRPL55-228ENST00000476267 JADE1Q6IE81 842 aa14.24□□□□□ -0.13
MRPL55-228ENST00000476267 TTC9BQ8N6N2 239 aa14.24□□□□□ -0.13
MRPL55-228ENST00000476267 OR10T2Q8NGX3 314 aa14.24□□□□□ -0.13
MRPL55-228ENST00000476267 FAM3CQ92520 227 aa14.24□□□□□ -0.13
MRPL55-228ENST00000476267 RAD54LQ92698 747 aa14.24□□□□□ -0.13
MRPL55-228ENST00000476267 LRRC3BQ96PB8 259 aa14.24□□□□□ -0.13
MRPL55-228ENST00000476267 IER2Q9BTL4 223 aa14.24□□□□□ -0.13
MRPL55-228ENST00000476267 FAM126AQ9BYI3 521 aaPredicted RBP14.24□□□□□ -0.13
MRPL55-228ENST00000476267 PARVGQ9HBI0 331 aa14.24□□□□□ -0.13
MRPL55-228ENST00000476267 HSFX1Q9UBD0 423 aa14.24□□□□□ -0.13
MRPL55-228ENST00000476267 NDRG2Q9UN36 371 aaKnown RBP14.24□□□□□ -0.13
MRPL55-228ENST00000476267 OBSL1O75147 1896 aa14.24□□□□□ -0.13
MRPL55-228ENST00000476267 ANKRD63C9JTQ0 380 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 XPOTO43592 962 aaKnown RBP14.23□□□□□ -0.13
MRPL55-228ENST00000476267 TRAK2O60296 914 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 CYP11A1P05108 521 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 CHRNB1P11230 501 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 PLCG1P19174 1290 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 MCM6Q14566 821 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 PUM1Q14671 1186 aaKnown RBP eCLIP14.23□□□□□ -0.13
MRPL55-228ENST00000476267 KARSQ15046 597 aaKnown RBP14.23□□□□□ -0.13
MRPL55-228ENST00000476267 C9orf57Q5W0N0 161 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 DSTYKQ6XUX3 929 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 GAREM2Q75VX8 874 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 CD302Q8IX05 232 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 MYCT1Q8N699 235 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 ATAD1Q8NBU5 361 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 ATRIPQ8WXE1 791 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 PSMG2Q969U7 264 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 E2F7Q96AV8 911 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 SENP8Q96LD8 212 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 MSTO1Q9BUK6 570 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 ST6GALNAC4Q9H4F1 302 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 RPF1Q9H9Y2 349 aaKnown RBP14.23□□□□□ -0.13
MRPL55-228ENST00000476267 SMG5Q9UPR3 1016 aaKnown RBP14.23□□□□□ -0.13
MRPL55-228ENST00000476267 SLC27A5Q9Y2P5 690 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 DERAQ9Y315 318 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 STYXL1Q9Y6J8 313 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 SCN1AP35498 2009 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 DENND4CQ5VZ89 1909 aa14.23□□□□□ -0.13
MRPL55-228ENST00000476267 TISP43B9A030 160 aa14.22□□□□□ -0.13
MRPL55-228ENST00000476267 H3BQV1 296 aa14.22□□□□□ -0.13
MRPL55-228ENST00000476267 ZNF263O14978 683 aa14.22□□□□□ -0.13
MRPL55-228ENST00000476267 CHADO15335 359 aa14.22□□□□□ -0.13
MRPL55-228ENST00000476267 ODC1P11926 461 aa14.22□□□□□ -0.13
MRPL55-228ENST00000476267 PAX3P23760 479 aa14.22□□□□□ -0.13
MRPL55-228ENST00000476267 WEE1P30291 646 aa14.22□□□□□ -0.13
MRPL55-228ENST00000476267 NMT1P30419 496 aaKnown RBP14.22□□□□□ -0.13
MRPL55-228ENST00000476267 LONP1P36776 959 aaKnown RBP14.22□□□□□ -0.13
MRPL55-228ENST00000476267 UBA7P41226 1012 aa14.22□□□□□ -0.13
MRPL55-228ENST00000476267 EPHB3P54753 998 aa14.22□□□□□ -0.13
MRPL55-228ENST00000476267 DGLUCYQ7Z3D6 616 aa14.22□□□□□ -0.13
MRPL55-228ENST00000476267 USP37Q86T82 979 aa14.22□□□□□ -0.13
MRPL55-228ENST00000476267 CALML4Q96GE6 196 aa14.22□□□□□ -0.13
MRPL55-228ENST00000476267 MSANTD3Q96H12 275 aa14.22□□□□□ -0.13
MRPL55-228ENST00000476267 HINFPQ9BQA5 517 aa14.22□□□□□ -0.13
MRPL55-228ENST00000476267 STRA6Q9BX79 667 aa14.22□□□□□ -0.13
MRPL55-228ENST00000476267 CCSER1Q9C0I3 900 aa14.22□□□□□ -0.13
MRPL55-228ENST00000476267 LMAN1LQ9HAT1 526 aa14.22□□□□□ -0.13
MRPL55-228ENST00000476267 C2CD2Q9Y426 696 aa14.22□□□□□ -0.13
MRPL55-228ENST00000476267 ASB3Q9Y575 518 aa14.22□□□□□ -0.13
MRPL55-228ENST00000476267 TCHHQ07283 1943 aa14.21□□□□□ -0.13
MRPL55-228ENST00000476267 PPP1R37O75864 691 aa14.21□□□□□ -0.13
MRPL55-228ENST00000476267 SOAT2O75908 522 aa14.21□□□□□ -0.13
MRPL55-228ENST00000476267 FAM13AO94988 1023 aa14.21□□□□□ -0.13
MRPL55-228ENST00000476267 ATF6P18850 670 aa14.21□□□□□ -0.13
MRPL55-228ENST00000476267 CCNE1P24864 410 aa14.21□□□□□ -0.13
MRPL55-228ENST00000476267 DHX8Q14562 1220 aaKnown RBP14.21□□□□□ -0.13
MRPL55-228ENST00000476267 TMEM132DQ14C87 1099 aa14.21□□□□□ -0.13
MRPL55-228ENST00000476267 ZC2HC1CQ53FD0 456 aaPredicted RBP14.21□□□□□ -0.13
MRPL55-228ENST00000476267 CRELD2Q6UXH1 353 aaPredicted RBP14.21□□□□□ -0.13
MRPL55-228ENST00000476267 DNAJB7Q7Z6W7 309 aaPredicted RBP14.21□□□□□ -0.13
MRPL55-228ENST00000476267 ARID3BQ8IVW6 561 aaPredicted RBP14.21□□□□□ -0.13
MRPL55-228ENST00000476267 LARP4BQ92615 738 aaKnown RBP14.21□□□□□ -0.13
MRPL55-228ENST00000476267 ZCWPW1Q9H0M4 648 aa14.21□□□□□ -0.13
MRPL55-228ENST00000476267 IKZF4Q9H2S9 585 aa14.21□□□□□ -0.13
MRPL55-228ENST00000476267 ASB7Q9H672 318 aa14.21□□□□□ -0.13
MRPL55-228ENST00000476267 IL21Q9HBE4 155 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms