RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 MED7O43513 233 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 H2AFZP0C0S5 128 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 FAM228BP0C875 321 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 CYP11B1P15538 503 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 CD58P19256 250 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 IBSPP21815 317 aaPredicted RBP13.07□□□□□ -0.32
MRPL55-227ENST00000475832 GNA15P30679 374 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 TAF6P49848 677 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 GNG11P61952 73 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 CDR2Q01850 454 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 C9orf57Q5W0N0 161 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 GLB1LQ6UWU2 654 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 SCARA5Q6ZMJ2 495 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 TRIM72Q6ZMU5 477 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 H2AFVQ71UI9 128 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 ECHDC2Q86YB7 292 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 GLYCTKQ8IVS8 523 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 KIF18AQ8NI77 898 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 URGCPQ8TCY9 931 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 CISHQ9NSE2 258 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 PUF60Q9UHX1 559 aaKnown RBP13.07□□□□□ -0.32
MRPL55-227ENST00000475832 NAGPAQ9UK23 515 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 INTUQ9ULD6 942 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 CNTN6Q9UQ52 1028 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 HCN4Q9Y3Q4 1203 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 ATP8B3O60423 1300 aa13.07□□□□□ -0.32
MRPL55-227ENST00000475832 ARL5CA6NH57 179 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 ACO1P21399 889 aaKnown RBP13.06□□□□□ -0.32
MRPL55-227ENST00000475832 LRPAP1P30533 357 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 RPL9P32969 192 aaKnown RBP13.06□□□□□ -0.32
MRPL55-227ENST00000475832 RFC2P35250 354 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 MLH1P40692 756 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 ASPAP45381 313 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 EPHB4P54760 987 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 NAP1L1P55209 391 aaKnown RBP13.06□□□□□ -0.32
MRPL55-227ENST00000475832 ETF1P62495 437 aaKnown RBP13.06□□□□□ -0.32
MRPL55-227ENST00000475832 FPGSQ05932 587 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 TRAF7Q6Q0C0 670 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 NYAP1Q6ZVC0 841 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 SLC47A2Q86VL8 602 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 EPS8L1Q8TE68 723 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 CTNNBL1Q8WYA6 563 aaPredicted RBP13.06□□□□□ -0.32
MRPL55-227ENST00000475832 RSPH1Q8WYR4 309 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 ZNF592Q92610 1267 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 SECISBP2LQ93073 1101 aaKnown RBP13.06□□□□□ -0.32
MRPL55-227ENST00000475832 C18orf25Q96B23 403 aaPredicted RBP13.06□□□□□ -0.32
MRPL55-227ENST00000475832 DDX27Q96GQ7 796 aaKnown RBP13.06□□□□□ -0.32
MRPL55-227ENST00000475832 CALR3Q96L12 384 aaKnown RBP13.06□□□□□ -0.32
MRPL55-227ENST00000475832 UROC1Q96N76 676 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 ZMAT2Q96NC0 199 aaKnown RBP13.06□□□□□ -0.32
MRPL55-227ENST00000475832 ALS2CR12Q96Q35 445 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 GAD1Q99259 594 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 ARID3AQ99856 593 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 C1QTNF1Q9BXJ1 281 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 BCO2Q9BYV7 579 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 TTYH1Q9H313 450 aaPredicted RBP13.06□□□□□ -0.32
MRPL55-227ENST00000475832 TUBGCP4Q9UGJ1 667 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 LRFN2Q9ULH4 789 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 GUCA1BQ9UMX6 200 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 ARIH1Q9Y4X5 557 aaPredicted RBP13.06□□□□□ -0.32
MRPL55-227ENST00000475832 CEP83Q9Y592 693 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 UMODL1Q5DID0 1318 aa13.06□□□□□ -0.32
MRPL55-227ENST00000475832 ANO9A1A5B4 782 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 ARHGEF37A1IGU5 675 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 DDX3XO00571 662 aaKnown RBP eCLIP13.05□□□□□ -0.325e-7■■□□□ 12.9
MRPL55-227ENST00000475832 PJA2O43164 708 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 HOXA2O43364 376 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 THAP12O43422 761 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 MGEA5O60502 916 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 HUS1O60921 280 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 TACC1O75410 805 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 PAEPP09466 180 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 WEE2P0C1S8 567 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 GZMAP12544 262 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 CASQ1P31415 396 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 CYP2C18P33260 490 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 GUCY2FP51841 1108 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 GRIK3Q13003 919 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 MBTPS1Q14703 1052 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 TAF3Q5VWG9 929 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 C16orf59Q7L2K0 433 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 NOP9Q86U38 636 aaKnown RBP13.05□□□□□ -0.32
MRPL55-227ENST00000475832 ABI1Q8IZP0 508 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 TMEM199Q8N511 208 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 RNF10Q8N5U6 811 aaKnown RBP13.05□□□□□ -0.32
MRPL55-227ENST00000475832 ELMO3Q96BJ8 720 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 VWCEQ96DN2 955 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 TRIM11Q96F44 468 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 PPP1R10Q96QC0 940 aaKnown RBP13.05□□□□□ -0.32
MRPL55-227ENST00000475832 UHRF1Q96T88 793 aaPredicted RBP13.05□□□□□ -0.32
MRPL55-227ENST00000475832 WNT8AQ9H1J5 351 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 TSPYL2Q9H2G4 693 aaPredicted RBP13.05□□□□□ -0.32
MRPL55-227ENST00000475832 ELAC1Q9H777 363 aaKnown RBP13.05□□□□□ -0.32
MRPL55-227ENST00000475832 KANSL3Q9P2N6 904 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 NOCTQ9UK39 431 aaKnown RBP13.05□□□□□ -0.32
MRPL55-227ENST00000475832 KIAA1257Q9ULG3 409 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 POLIQ9UNA4 740 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 REXO2Q9Y3B8 237 aaKnown RBP13.05□□□□□ -0.32
MRPL55-227ENST00000475832 PAXBP1Q9Y5B6 917 aa13.05□□□□□ -0.32
MRPL55-227ENST00000475832 SNX9Q9Y5X1 595 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms