RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 CDV3Q9UKY7 258 aaKnown RBP16.99■□□□□ 0.31
SRRT-209ENST00000474896 UBQLN1Q9UMX0 589 aaKnown RBP16.99■□□□□ 0.31
SRRT-209ENST00000474896 OR6C75A6NL08 312 aa16.98■□□□□ 0.31
SRRT-209ENST00000474896 ARNTLO00327 626 aa16.98■□□□□ 0.31
SRRT-209ENST00000474896 CHADO15335 359 aa16.98■□□□□ 0.31
SRRT-209ENST00000474896 PLA2G4BP0C869 781 aa16.98■□□□□ 0.31
SRRT-209ENST00000474896 AARSP49588 968 aaKnown RBP eCLIP16.98■□□□□ 0.312e-6■■■□□ 15.6
SRRT-209ENST00000474896 GUCY2FP51841 1108 aa16.98■□□□□ 0.31
SRRT-209ENST00000474896 KPNA1P52294 538 aaPredicted RBP16.98■□□□□ 0.31
SRRT-209ENST00000474896 MLLT6P55198 1093 aaPredicted RBP16.98■□□□□ 0.31
SRRT-209ENST00000474896 SATB1Q01826 763 aa16.98■□□□□ 0.31
SRRT-209ENST00000474896 GPR17Q13304 367 aa16.98■□□□□ 0.31
SRRT-209ENST00000474896 PLD1Q13393 1074 aa16.98■□□□□ 0.31
SRRT-209ENST00000474896 MCTP1Q6DN14 999 aa16.98■□□□□ 0.31
SRRT-209ENST00000474896 CENPPQ6IPU0 288 aa16.98■□□□□ 0.31
SRRT-209ENST00000474896 HAUS6Q7Z4H7 955 aa16.98■□□□□ 0.31
SRRT-209ENST00000474896 TMC8Q8IU68 726 aa16.98■□□□□ 0.31
SRRT-209ENST00000474896 ARID3BQ8IVW6 561 aaPredicted RBP16.98■□□□□ 0.31
SRRT-209ENST00000474896 DNAJC25Q9H1X3 360 aa16.98■□□□□ 0.31
SRRT-209ENST00000474896 COL4A2P08572 1712 aa16.97■□□□□ 0.31
SRRT-209ENST00000474896 DCDC2BA2VCK2 349 aa16.97■□□□□ 0.31
SRRT-209ENST00000474896 SOX9P48436 509 aa16.97■□□□□ 0.31
SRRT-209ENST00000474896 ATP2C1P98194 919 aaPredicted RBP16.97■□□□□ 0.31
SRRT-209ENST00000474896 PPP2R3AQ06190 1150 aa16.97■□□□□ 0.31
SRRT-209ENST00000474896 SPEM2Q0P670 501 aa16.97■□□□□ 0.31
SRRT-209ENST00000474896 GAS6Q14393 721 aa16.97■□□□□ 0.31
SRRT-209ENST00000474896 ARSHQ5FYA8 562 aa16.97■□□□□ 0.31
SRRT-209ENST00000474896 STXBP5Q5T5C0 1151 aa16.97■□□□□ 0.31
SRRT-209ENST00000474896 OVOS1Q6IE37 1185 aa16.97■□□□□ 0.31
SRRT-209ENST00000474896 PRR23BQ6ZRT6 265 aa16.97■□□□□ 0.31
SRRT-209ENST00000474896 DNAJB7Q7Z6W7 309 aaPredicted RBP16.97■□□□□ 0.31
SRRT-209ENST00000474896 KCTD17Q8N5Z5 321 aa16.97■□□□□ 0.31
SRRT-209ENST00000474896 ATAD1Q8NBU5 361 aa16.97■□□□□ 0.31
SRRT-209ENST00000474896 TTC8Q8TAM2 541 aa16.97■□□□□ 0.31
SRRT-209ENST00000474896 CDK5RAP3Q96JB5 506 aa16.97■□□□□ 0.31
SRRT-209ENST00000474896 C8orf33Q9H7E9 229 aaPredicted RBP16.97■□□□□ 0.31
SRRT-209ENST00000474896 RPF1Q9H9Y2 349 aaKnown RBP16.97■□□□□ 0.31
SRRT-209ENST00000474896 RBM12Q9NTZ6 932 aaKnown RBP16.97■□□□□ 0.31
SRRT-209ENST00000474896 KCND2Q9NZV8 630 aa16.97■□□□□ 0.31
SRRT-209ENST00000474896 LARSQ9P2J5 1176 aaKnown RBP16.97■□□□□ 0.31
SRRT-209ENST00000474896 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.97■□□□□ 0.31
SRRT-209ENST00000474896 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.97■□□□□ 0.31
SRRT-209ENST00000474896 SPTBN2O15020 2390 aa16.97■□□□□ 0.31
SRRT-209ENST00000474896 VWA3AA6NCI4 1184 aa16.96■□□□□ 0.31
SRRT-209ENST00000474896 SLC38A8A6NNN8 435 aa16.96■□□□□ 0.31
SRRT-209ENST00000474896 H0YCG3 227 aa16.96■□□□□ 0.31
SRRT-209ENST00000474896 PPEF2O14830 753 aa16.96■□□□□ 0.31
SRRT-209ENST00000474896 XPOTO43592 962 aaKnown RBP16.96■□□□□ 0.31
SRRT-209ENST00000474896 LIG4P49917 911 aa16.96■□□□□ 0.31
SRRT-209ENST00000474896 NCKAP1LP55160 1127 aa16.96■□□□□ 0.31
SRRT-209ENST00000474896 FCHO2Q0JRZ9 810 aa16.96■□□□□ 0.31
SRRT-209ENST00000474896 MYBPC2Q14324 1141 aa16.96■□□□□ 0.31
SRRT-209ENST00000474896 ENOX2Q16206 610 aaKnown RBP16.96■□□□□ 0.31
SRRT-209ENST00000474896 KYAT1Q16773 422 aa16.96■□□□□ 0.31
SRRT-209ENST00000474896 RILPL1Q5EBL4 403 aa16.96■□□□□ 0.31
SRRT-209ENST00000474896 LAIR1Q6GTX8 287 aa16.96■□□□□ 0.31
SRRT-209ENST00000474896 ARMCX5Q6P1M9 558 aa16.96■□□□□ 0.31
SRRT-209ENST00000474896 SPEM1Q8N4L4 309 aa16.96■□□□□ 0.31
SRRT-209ENST00000474896 FAM212AQ96EL1 285 aa16.96■□□□□ 0.31
SRRT-209ENST00000474896 CNTNAP3BQ96NU0 1288 aa16.96■□□□□ 0.31
SRRT-209ENST00000474896 LRRC3BQ96PB8 259 aa16.96■□□□□ 0.31
SRRT-209ENST00000474896 TMEM209Q96SK2 561 aa16.96■□□□□ 0.31
SRRT-209ENST00000474896 RTKNQ9BST9 563 aa16.96■□□□□ 0.31
SRRT-209ENST00000474896 CNTNAP3Q9BZ76 1288 aa16.96■□□□□ 0.31
SRRT-209ENST00000474896 ATXN3LQ9H3M9 355 aa16.96■□□□□ 0.31
SRRT-209ENST00000474896 ASB3Q9Y575 518 aa16.96■□□□□ 0.31
SRRT-209ENST00000474896 MTMR11A4FU01 709 aa16.95■□□□□ 0.3
SRRT-209ENST00000474896 CHURC1-FNTBB4DL54 471 aa16.95■□□□□ 0.3
SRRT-209ENST00000474896 DPYSL4O14531 572 aa16.95■□□□□ 0.3
SRRT-209ENST00000474896 HRO43593 1189 aa16.95■□□□□ 0.3
SRRT-209ENST00000474896 SOAT2O75908 522 aa16.95■□□□□ 0.3
SRRT-209ENST00000474896 RETP07949 1114 aa16.95■□□□□ 0.3
SRRT-209ENST00000474896 TYMPP19971 482 aa16.95■□□□□ 0.3
SRRT-209ENST00000474896 FNTBP49356 437 aa16.95■□□□□ 0.3
SRRT-209ENST00000474896 LILRA4P59901 499 aa16.95■□□□□ 0.3
SRRT-209ENST00000474896 DMWDQ09019 674 aa16.95■□□□□ 0.3
SRRT-209ENST00000474896 SIM2Q14190 667 aaPredicted RBP16.95■□□□□ 0.3
SRRT-209ENST00000474896 LRRC32Q14392 662 aa16.95■□□□□ 0.3
SRRT-209ENST00000474896 BECN1Q14457 450 aa16.95■□□□□ 0.3
SRRT-209ENST00000474896 TMEM119Q4V9L6 283 aa16.95■□□□□ 0.3
SRRT-209ENST00000474896 SPATA1Q5VX52 437 aa16.95■□□□□ 0.3
SRRT-209ENST00000474896 C1orf228Q6PIY5 440 aa16.95■□□□□ 0.3
SRRT-209ENST00000474896 GAREM2Q75VX8 874 aa16.95■□□□□ 0.3
SRRT-209ENST00000474896 MSANTD3Q96H12 275 aa16.95■□□□□ 0.3
SRRT-209ENST00000474896 INTS4Q96HW7 963 aaKnown RBP16.95■□□□□ 0.3
SRRT-209ENST00000474896 ZFYVE19Q96K21 471 aa16.95■□□□□ 0.3
SRRT-209ENST00000474896 SENP8Q96LD8 212 aa16.95■□□□□ 0.3
SRRT-209ENST00000474896 TSPAN18Q96SJ8 248 aa16.95■□□□□ 0.3
SRRT-209ENST00000474896 TBX20Q9UMR3 447 aa16.95■□□□□ 0.3
SRRT-209ENST00000474896 SMC3Q9UQE7 1217 aa16.95■□□□□ 0.3
SRRT-209ENST00000474896 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.95■□□□□ 0.3
SRRT-209ENST00000474896 MYBPHLA2RUH7 354 aa16.94■□□□□ 0.3
SRRT-209ENST00000474896 SPECC1L-ADORA2AF8WAN1 911 aa16.94■□□□□ 0.3
SRRT-209ENST00000474896 HNRNPDLO14979 420 aaKnown RBP16.94■□□□□ 0.3
SRRT-209ENST00000474896 OGTO15294 1046 aa16.94■□□□□ 0.3
SRRT-209ENST00000474896 FAM189A1O60320 539 aa16.94■□□□□ 0.3
SRRT-209ENST00000474896 ADRB2P07550 413 aa16.94■□□□□ 0.3
SRRT-209ENST00000474896 GABRR2P28476 465 aa16.94■□□□□ 0.3
SRRT-209ENST00000474896 CDR1P51861 262 aa16.94■□□□□ 0.3
SRRT-209ENST00000474896 SRSF5Q13243 272 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms