RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 TMEM35BQ8NCS4 154 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 OR6J1Q8NGC5 347 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 FEZF2Q8TBJ5 459 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 TRIM7Q9C029 511 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 LHX5Q9H2C1 402 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 PLEKHA4Q9H4M7 779 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 FAM204AQ9H8W3 233 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 CYP3A43Q9HB55 503 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 PARVAQ9NVD7 372 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 GRHL1Q9NZI5 618 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 RASAL2Q9UJF2 1139 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 MTUS1Q9ULD2 1270 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 GNEQ9Y223 722 aaKnown RBP10.44□□□□□ -0.74
USP39-214ENST00000474572 AKT3Q9Y243 479 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 C2CD2Q9Y426 696 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 NFS1Q9Y697 457 aa10.44□□□□□ -0.74
USP39-214ENST00000474572 KAT6AQ92794 2004 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 A0A1B0GUA9 196 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 TCRBV7S2A1N4TA0A589 114 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 TMEM191CA6NGB0 347 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 A6NJR5 290 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 PPFIA2O75334 1257 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 RPS6KA5O75582 802 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 CELF2O95319 508 aaKnown RBP10.43□□□□□ -0.74
USP39-214ENST00000474572 VTNP04004 478 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 GRM5P41594 1212 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 GUCY2FP51841 1108 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 TAP1Q03518 808 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 KLF1Q13351 362 aaPredicted RBP10.43□□□□□ -0.74
USP39-214ENST00000474572 MTMR3Q13615 1198 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 HLTFQ14527 1009 aaKnown RBP eCLIP10.43□□□□□ -0.74
USP39-214ENST00000474572 PCBP1Q15365 356 aaKnown RBP eCLIP10.43□□□□□ -0.74
USP39-214ENST00000474572 DGKDQ16760 1214 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 TTMPQ5BVD1 217 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 ZNF667Q5HYK9 610 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 LRRC38Q5VT99 294 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 JADE1Q6IE81 842 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 LLGL2Q6P1M3 1020 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 CCDC137Q6PK04 289 aaKnown RBP10.43□□□□□ -0.74
USP39-214ENST00000474572 MMS22LQ6ZRQ5 1243 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 ZNF771Q7L3S4 317 aaPredicted RBP10.43□□□□□ -0.74
USP39-214ENST00000474572 TMC3Q7Z5M5 1100 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 CDR2LQ86X02 465 aaPredicted RBP10.43□□□□□ -0.74
USP39-214ENST00000474572 PASD1Q8IV76 773 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 RHOT1Q8IXI2 618 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 KATNAL2Q8IYT4 538 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 KIAA0319LQ8IZA0 1049 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 WDTC1Q8N5D0 677 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 GOLGA6L1Q8N7Z2 621 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 NIPA2Q8N8Q9 360 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.43□□□□□ -0.74
USP39-214ENST00000474572 TFAP2BQ92481 460 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 USP6NLQ92738 828 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 MAGOHBQ96A72 148 aaKnown RBP10.43□□□□□ -0.74
USP39-214ENST00000474572 FAM212AQ96EL1 285 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 ZNF668Q96K58 619 aaPredicted RBP10.43□□□□□ -0.74
USP39-214ENST00000474572 SDCBP2Q9H190 292 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 SLC5A4Q9NY91 659 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 IP6K2Q9UHH9 426 aa10.43□□□□□ -0.74
USP39-214ENST00000474572 SMIM35A0A1B0GVV1 85 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 MBLAC1A4D2B0 266 aaPredicted RBP10.42□□□□□ -0.74
USP39-214ENST00000474572 HAS3O00219 553 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 TLR3O15455 904 aaKnown RBP10.42□□□□□ -0.74
USP39-214ENST00000474572 SHOX2O60902 331 aaPredicted RBP10.42□□□□□ -0.74
USP39-214ENST00000474572 CILPO75339 1184 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 BRD2P25440 801 aaKnown RBP10.42□□□□□ -0.74
USP39-214ENST00000474572 FLT3P36888 993 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 HSD17B3P37058 310 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 RAD23BP54727 409 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 TAS2R40P59535 323 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 ADAM17P78536 824 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 SKOR1P84550 965 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 CDC42EP1Q00587 391 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 ZNF252P-AS1Q0IIN9 211 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 INCA1Q0VD86 236 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 MKRN3Q13064 507 aaKnown RBP10.42□□□□□ -0.74
USP39-214ENST00000474572 MAP2K5Q13163 448 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 DCAF4L1Q3SXM0 396 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 SYDE1Q6ZW31 735 aaPredicted RBP10.42□□□□□ -0.74
USP39-214ENST00000474572 ILDR2Q71H61 639 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 C3orf20Q8ND61 904 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 EXD1Q8NHP7 514 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 ARL8AQ96BM9 186 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 C18orf8Q96DM3 657 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 CPB2Q96IY4 423 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 RUFY1Q96T51 708 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 FMO2Q99518 471 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 HERPUD2Q9BSE4 406 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 ADAMTS10Q9H324 1103 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 PARP2Q9UGN5 583 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 ITGA11Q9UKX5 1188 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 ZHX1Q9UKY1 873 aaPredicted RBP10.42□□□□□ -0.74
USP39-214ENST00000474572 POLIQ9UNA4 740 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 DERAQ9Y315 318 aa10.42□□□□□ -0.74
USP39-214ENST00000474572 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.42□□□□□ -0.74
USP39-214ENST00000474572 NRCAMQ92823 1304 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 GOLGA6CA6NDK9 693 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 MED7O43513 233 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 GPR32O75388 356 aa10.41□□□□□ -0.74
USP39-214ENST00000474572 ITGB3P05106 788 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms