RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 SCAF8Q9UPN6 1271 aaKnown RBP6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 EXOC7Q9UPT5 735 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 MRFAP1Q9Y605 127 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 PPLO60437 1756 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 TMEM221A6NGB7 291 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 ZSCAN5CA6NGD5 496 aaPredicted RBP6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 ZW10O43264 779 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 PRPSAP2O60256 369 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 DOK2O60496 412 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 B4GALT4O60513 344 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 SEC22BO75396 215 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 URI1O94763 535 aaPredicted RBP6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 ADRB2P07550 413 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 SNRPA1P09661 255 aaKnown RBP6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 IDO1P14902 403 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 ALOX12P18054 663 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 ALAS2P22557 587 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 CCND1P24385 295 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 RPP38P78345 283 aaKnown RBP6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 SMAD3P84022 425 aaKnown RBP6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 TMPRSS15P98073 1019 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 CYP4F8P98187 520 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 TFCP2Q12800 502 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 GNA13Q14344 377 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 SART3Q15020 963 aaKnown RBP6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 ABCB5Q2M3G0 1257 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 CCDC57Q2TAC2 916 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 SLC10A6Q3KNW5 377 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 FAM26DQ5JW98 314 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 CEP97Q8IW35 865 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 C3orf20Q8ND61 904 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 CD99L2Q8TCZ2 262 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 SMARCE1Q969G3 411 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 PPP1R13BQ96KQ4 1090 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 ZSCAN31Q96LW9 406 aaPredicted RBP6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 CCDC74BQ96LY2 380 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 GAS2L1Q99501 681 aaPredicted RBP6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 KIFC3Q9BVG8 833 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 PHF20Q9BVI0 1012 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 ITM2CQ9NQX7 267 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 SDHAF3Q9NRP4 125 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 TBC1D29Q9UFV1 150 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 FETUBQ9UGM5 382 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 TIMM22Q9Y584 194 aa6.49□□□□□ -1.37
SMARCE1-208ENST00000474246 WDR19Q8NEZ3 1342 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 RGSL1A5PLK6 1076 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 PGPEP1LA6NFU8 196 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 CAPN14A8MX76 684 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 STX16-NPEPL1H3BU86 382 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 AP3D1O14617 1153 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 KERAO60938 352 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 PSAPP07602 524 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 DHRS4L1P0CG22 281 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 BCRP11274 1271 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 MCM3P25205 808 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 EEF1GP26641 437 aaKnown RBP6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 ANXA13P27216 316 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 CRY1Q16526 586 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 ERCC6LQ2NKX8 1250 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 ARL13BQ3SXY8 428 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 CEP78Q5JTW2 689 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 C6orf89Q6UWU4 347 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 OSTM1Q86WC4 334 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 LILRB4Q8NHJ6 448 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 VPS50Q96JG6 964 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 CMTM3Q96MX0 182 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 YME1L1Q96TA2 773 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 TTYH1Q9H313 450 aaPredicted RBP6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 GHITMQ9H3K2 345 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 ADPRHL2Q9NX46 363 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 HSPBP1Q9NZL4 362 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 RGL1Q9NZL6 768 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 SRP68Q9UHB9 627 aaKnown RBP6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 PHF24Q9UPV7 400 aa6.48□□□□□ -1.37
SMARCE1-208ENST00000474246 A0A1W2PPH5 198 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 TISP43B9A030 160 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 B9A039 149 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 GOLGA8SH3BPF8 625 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 TPP1O14773 563 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 SNRNP70P08621 437 aaKnown RBP6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 FAM153BP0C7A2 387 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 FGFR4P22455 802 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 DIO1P49895 249 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 OLR1P78380 273 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 MAPRE2Q15555 327 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 ZNF674Q2M3X9 581 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 NDUFAF5Q5TEU4 345 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 KANK2Q63ZY3 851 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 FAM173BQ6P4H8 233 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 IL27RAQ6UWB1 636 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 LIAT1Q6ZQX7 453 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 PALM2Q8IXS6 379 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 ANKS4BQ8N8V4 417 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 FAM71DQ8N9W8 422 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 B4GALNT2Q8NHY0 566 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 GDAP1Q8TB36 358 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 RUBCNQ92622 972 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 TBCDQ9BTW9 1192 aa6.47□□□□□ -1.37
SMARCE1-208ENST00000474246 XKR8Q9H6D3 395 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms