RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 C2CD4DB7Z1M9 353 aa20.41■□□□□ 0.86
PTCD3-210ENST00000473829 SEC24AO95486 1093 aa20.41■□□□□ 0.86
PTCD3-210ENST00000473829 VNN2O95498 520 aa20.41■□□□□ 0.86
PTCD3-210ENST00000473829 PNPLA4P41247 253 aa20.41■□□□□ 0.86
PTCD3-210ENST00000473829 BFSP1Q12934 665 aa20.41■□□□□ 0.86
PTCD3-210ENST00000473829 ZCWPW2Q504Y3 356 aa20.41■□□□□ 0.86
PTCD3-210ENST00000473829 PPM1LQ5SGD2 360 aa20.41■□□□□ 0.86
PTCD3-210ENST00000473829 WSCD1Q658N2 575 aa20.41■□□□□ 0.86
PTCD3-210ENST00000473829 RNF19BQ6ZMZ0 732 aa20.41■□□□□ 0.86
PTCD3-210ENST00000473829 RNF135Q8IUD6 432 aa20.41■□□□□ 0.86
PTCD3-210ENST00000473829 LRRC52Q8N7C0 313 aa20.41■□□□□ 0.86
PTCD3-210ENST00000473829 OR10T2Q8NGX3 314 aa20.41■□□□□ 0.86
PTCD3-210ENST00000473829 ZNF516Q92618 1163 aa20.41■□□□□ 0.86
PTCD3-210ENST00000473829 GSDMAQ96QA5 445 aa20.41■□□□□ 0.86
PTCD3-210ENST00000473829 NOTCH4Q99466 2003 aa20.41■□□□□ 0.86
PTCD3-210ENST00000473829 CCL16O15467 120 aa20.4■□□□□ 0.86
PTCD3-210ENST00000473829 KINO60870 393 aaKnown RBP20.4■□□□□ 0.86
PTCD3-210ENST00000473829 CLUHO75153 1309 aa20.4■□□□□ 0.86
PTCD3-210ENST00000473829 KIF20AO95235 890 aa20.4■□□□□ 0.86
PTCD3-210ENST00000473829 TNNC2P02585 160 aa20.4■□□□□ 0.86
PTCD3-210ENST00000473829 HNRNPA1P09651 372 aaKnown RBP eCLIP20.4■□□□□ 0.86
PTCD3-210ENST00000473829 CPB1P15086 417 aa20.4■□□□□ 0.86
PTCD3-210ENST00000473829 ATF2P15336 505 aa20.4■□□□□ 0.86
PTCD3-210ENST00000473829 TNNI1P19237 187 aa20.4■□□□□ 0.86
PTCD3-210ENST00000473829 HOXA9P31269 272 aa20.4■□□□□ 0.86
PTCD3-210ENST00000473829 RBP5P82980 135 aa20.4■□□□□ 0.86
PTCD3-210ENST00000473829 DUOXA2Q1HG44 320 aa20.4■□□□□ 0.86
PTCD3-210ENST00000473829 CYP26C1Q6V0L0 522 aa20.4■□□□□ 0.86
PTCD3-210ENST00000473829 CCDC149Q6ZUS6 474 aa20.4■□□□□ 0.86
PTCD3-210ENST00000473829 TRAPPC11Q7Z392 1133 aa20.4■□□□□ 0.86
PTCD3-210ENST00000473829 SMARCE1Q969G3 411 aa20.4■□□□□ 0.86
PTCD3-210ENST00000473829 FNBP1Q96RU3 617 aa20.4■□□□□ 0.86
PTCD3-210ENST00000473829 WDR6Q9NNW5 1121 aaKnown RBP20.4■□□□□ 0.86
PTCD3-210ENST00000473829 RMND1Q9NWS8 449 aa20.4■□□□□ 0.86
PTCD3-210ENST00000473829 L1RE1Q9UN81 338 aa20.4■□□□□ 0.86
PTCD3-210ENST00000473829 DOCK8Q8NF50 2099 aa20.39■□□□□ 0.86
PTCD3-210ENST00000473829 OR6C75A6NL08 312 aa20.39■□□□□ 0.85
PTCD3-210ENST00000473829 LRRIQ3A6PVS8 624 aaPredicted RBP20.39■□□□□ 0.85
PTCD3-210ENST00000473829 CALUO43852 315 aaPredicted RBP20.39■□□□□ 0.85
PTCD3-210ENST00000473829 N4BP1O75113 896 aaKnown RBP20.39■□□□□ 0.85
PTCD3-210ENST00000473829 SMC2O95347 1197 aa20.39■□□□□ 0.85
PTCD3-210ENST00000473829 PRCPP42785 496 aa20.39■□□□□ 0.85
PTCD3-210ENST00000473829 UBE2HP62256 183 aa20.39■□□□□ 0.85
PTCD3-210ENST00000473829 NTHL1P78549 312 aa20.39■□□□□ 0.85
PTCD3-210ENST00000473829 ZNF658Q5TYW1 1059 aaPredicted RBP20.39■□□□□ 0.85
PTCD3-210ENST00000473829 TPGS2Q68CL5 300 aa20.39■□□□□ 0.85
PTCD3-210ENST00000473829 ELOA2Q8IYF1 753 aaPredicted RBP20.39■□□□□ 0.85
PTCD3-210ENST00000473829 PARD3BQ8TEW8 1205 aa20.39■□□□□ 0.85
PTCD3-210ENST00000473829 PGLYRP2Q96PD5 576 aa20.39■□□□□ 0.85
PTCD3-210ENST00000473829 CRISPLD1Q9H336 500 aa20.39■□□□□ 0.85
PTCD3-210ENST00000473829 EPHX3Q9H6B9 360 aa20.39■□□□□ 0.85
PTCD3-210ENST00000473829 PIDD1Q9HB75 910 aa20.39■□□□□ 0.85
PTCD3-210ENST00000473829 AFF4Q9UHB7 1163 aaKnown RBP20.39■□□□□ 0.85
PTCD3-210ENST00000473829 MUTYHQ9UIF7 546 aa20.39■□□□□ 0.85
PTCD3-210ENST00000473829 TRIOO75962 3097 aa20.39■□□□□ 0.85
PTCD3-210ENST00000473829 NR2F2P24468 414 aa20.38■□□□□ 0.85
PTCD3-210ENST00000473829 DLG4P78352 724 aa20.38■□□□□ 0.85
PTCD3-210ENST00000473829 ADCY1Q08828 1119 aa20.38■□□□□ 0.85
PTCD3-210ENST00000473829 MYBPC2Q14324 1141 aa20.38■□□□□ 0.85
PTCD3-210ENST00000473829 NFIL3Q16649 462 aa20.38■□□□□ 0.85
PTCD3-210ENST00000473829 UVSSAQ2YD98 709 aa20.38■□□□□ 0.85
PTCD3-210ENST00000473829 CEP135Q66GS9 1140 aa20.38■□□□□ 0.85
PTCD3-210ENST00000473829 GRASPQ7Z6J2 395 aaPredicted RBP20.38■□□□□ 0.85
PTCD3-210ENST00000473829 TCEAL8Q8IYN2 117 aa20.38■□□□□ 0.85
PTCD3-210ENST00000473829 PDCL2Q8N4E4 241 aa20.38■□□□□ 0.85
PTCD3-210ENST00000473829 CYP4F11Q9HBI6 524 aa20.38■□□□□ 0.85
PTCD3-210ENST00000473829 HCFC1R1Q9NWW0 138 aa20.38■□□□□ 0.85
PTCD3-210ENST00000473829 GDAP2Q9NXN4 497 aa20.38■□□□□ 0.85
PTCD3-210ENST00000473829 HOOK1Q9UJC3 728 aaKnown RBP20.38■□□□□ 0.85
PTCD3-210ENST00000473829 MAN1B1Q9UKM7 699 aa20.38■□□□□ 0.85
PTCD3-210ENST00000473829 DSEQ9UL01 958 aa20.38■□□□□ 0.85
PTCD3-210ENST00000473829 NR2E1Q9Y466 385 aa20.38■□□□□ 0.85
PTCD3-210ENST00000473829 INSL5Q9Y5Q6 135 aa20.38■□□□□ 0.85
PTCD3-210ENST00000473829 ARHGEF37A1IGU5 675 aa20.37■□□□□ 0.85
PTCD3-210ENST00000473829 PRRG1O14668 218 aa20.37■□□□□ 0.85
PTCD3-210ENST00000473829 PRPF40AO75400 957 aaKnown RBP20.37■□□□□ 0.85
PTCD3-210ENST00000473829 AKAP3O75969 853 aa20.37■□□□□ 0.85
PTCD3-210ENST00000473829 CST3P01034 146 aaPredicted RBP20.37■□□□□ 0.85
PTCD3-210ENST00000473829 CDR1P51861 262 aa20.37■□□□□ 0.85
PTCD3-210ENST00000473829 CLDN10P78369 228 aa20.37■□□□□ 0.85
PTCD3-210ENST00000473829 COBLL1Q53SF7 1204 aa20.37■□□□□ 0.85
PTCD3-210ENST00000473829 ISM2Q6H9L7 571 aa20.37■□□□□ 0.85
PTCD3-210ENST00000473829 TDRD5Q8NAT2 981 aaKnown RBP20.37■□□□□ 0.85
PTCD3-210ENST00000473829 HPDLQ96IR7 371 aa20.37■□□□□ 0.85
PTCD3-210ENST00000473829 OXCT2Q9BYC2 517 aaPredicted RBP20.37■□□□□ 0.85
PTCD3-210ENST00000473829 POLIQ9UNA4 740 aa20.37■□□□□ 0.85
PTCD3-210ENST00000473829 SNX9Q9Y5X1 595 aa20.37■□□□□ 0.85
PTCD3-210ENST00000473829 MTMR11A4FU01 709 aa20.36■□□□□ 0.85
PTCD3-210ENST00000473829 PI4K2BG5E9Z4 385 aa20.36■□□□□ 0.85
PTCD3-210ENST00000473829 POU2F2P09086 479 aa20.36■□□□□ 0.85
PTCD3-210ENST00000473829 ELF1P32519 619 aa20.36■□□□□ 0.85
PTCD3-210ENST00000473829 PMS1P54277 932 aaKnown RBP20.36■□□□□ 0.85
PTCD3-210ENST00000473829 GPR17Q13304 367 aa20.36■□□□□ 0.85
PTCD3-210ENST00000473829 C1orf220Q5T0J3 134 aa20.36■□□□□ 0.85
PTCD3-210ENST00000473829 TDRD10Q5VZ19 366 aaKnown RBP20.36■□□□□ 0.85
PTCD3-210ENST00000473829 OSTM1Q86WC4 334 aa20.36■□□□□ 0.85
PTCD3-210ENST00000473829 METTL23Q86XA0 190 aa20.36■□□□□ 0.85
PTCD3-210ENST00000473829 TTC9BQ8N6N2 239 aa20.36■□□□□ 0.85
PTCD3-210ENST00000473829 EEF2KMTQ96G04 330 aa20.36■□□□□ 0.85
PTCD3-210ENST00000473829 MYADMQ96S97 322 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms