RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 SOX4Q06945 474 aaPredicted RBP11.5□□□□□ -0.57
SP140-208ENST00000473711 MYO1EQ12965 1108 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 TCTN1Q2MV58 587 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 CCDC122Q5T0U0 273 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 TAF3Q5VWG9 929 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 TMEM270Q6UE05 265 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 SLC24A5Q71RS6 500 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 KIAA1328Q86T90 577 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 SLC47A2Q86VL8 602 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 VPS36Q86VN1 386 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 RPUSD2Q8IZ73 545 aaKnown RBP11.5□□□□□ -0.57
SP140-208ENST00000473711 UBR7Q8N806 425 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 GSTCDQ8NEC7 633 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 LNX1Q8TBB1 728 aaPredicted RBP11.5□□□□□ -0.57
SP140-208ENST00000473711 SEPT8Q92599 483 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 PPP1R10Q96QC0 940 aaKnown RBP11.5□□□□□ -0.57
SP140-208ENST00000473711 FTHL17Q9BXU8 183 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 SDCBP2Q9H190 292 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 WNT8AQ9H1J5 351 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 VRTNQ9H8Y1 702 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 RSAD1Q9HA92 442 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 GOLGA2P5Q9HBQ8 144 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 SEPT11Q9NVA2 429 aaKnown RBP11.5□□□□□ -0.57
SP140-208ENST00000473711 TFR2Q9UP52 801 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 PCDHA13Q9Y5I0 950 aa11.5□□□□□ -0.57
SP140-208ENST00000473711 ANO9A1A5B4 782 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 PIRO00625 290 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 STAU1O95793 577 aaKnown RBP11.49□□□□□ -0.57
SP140-208ENST00000473711 EOMESO95936 686 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 THP07101 528 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 CLTBP09497 229 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 P4HA1P13674 534 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 CYP11B1P15538 503 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 CHRNB2P17787 502 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 YWHAEP62258 255 aaKnown RBP11.49□□□□□ -0.57
SP140-208ENST00000473711 TNNC1P63316 161 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 SLC18A3Q16572 532 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 DEFB128Q7Z7B8 93 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 NOP9Q86U38 636 aaKnown RBP11.49□□□□□ -0.57
SP140-208ENST00000473711 ZNF598Q86UK7 904 aaKnown RBP11.49□□□□□ -0.57
SP140-208ENST00000473711 GLYCTKQ8IVS8 523 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 LRRC52Q8N7C0 313 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 RBBP8NLQ8NC74 664 aaPredicted RBP11.49□□□□□ -0.57
SP140-208ENST00000473711 SLC30A5Q8TAD4 765 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 MMS19Q96T76 1030 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 SYT11Q9BT88 431 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 BCO2Q9BYV7 579 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 SMYD3Q9H7B4 428 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 UBN1Q9NPG3 1134 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 LZTFL1Q9NQ48 299 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 CISHQ9NSE2 258 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 SLC38A7Q9NVC3 462 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 TBX21Q9UL17 535 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 INPP5FQ9Y2H2 1132 aa11.49□□□□□ -0.57
SP140-208ENST00000473711 FAM170AA1A519 330 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 RCCD1A6NED2 376 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 GOLGA6L9A6NEM1 432 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 TMCO5BA8MYB1 307 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 PARNO95453 639 aaKnown RBP11.48□□□□□ -0.57
SP140-208ENST00000473711 ABL1P00519 1130 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 POMCP01189 267 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 MMEP08473 750 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 CAPN2P17655 700 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 EN2P19622 333 aaPredicted RBP11.48□□□□□ -0.57
SP140-208ENST00000473711 ANXA13P27216 316 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 ARHGAP25P42331 645 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 PDE6CP51160 858 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 VAV2P52735 878 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 BPIFB4P59827 614 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 BMS1Q14692 1282 aaKnown RBP11.48□□□□□ -0.57
SP140-208ENST00000473711 PTPN14Q15678 1187 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 ZNF394Q53GI3 561 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 ALKBH5Q6P6C2 394 aaKnown RBP11.48□□□□□ -0.57
SP140-208ENST00000473711 DNAAF5Q86Y56 855 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 OLIG1Q8TAK6 271 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 EPS8L1Q8TE68 723 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 APBB2Q92870 758 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 FAXDC2Q96IV6 333 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 C16orf45Q96MC5 204 aaPredicted RBP11.48□□□□□ -0.57
SP140-208ENST00000473711 PCDHB18PQ96TA0 734 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 CYP3A43Q9HB55 503 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 CACNG4Q9UBN1 327 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 PUF60Q9UHX1 559 aaKnown RBP11.48□□□□□ -0.57
SP140-208ENST00000473711 NAGPAQ9UK23 515 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 NOCTQ9UK39 431 aaKnown RBP11.48□□□□□ -0.57
SP140-208ENST00000473711 CNTN6Q9UQ52 1028 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 SNX9Q9Y5X1 595 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 CITO14578 2027 aa11.48□□□□□ -0.57
SP140-208ENST00000473711 HTTP42858 3142 aa11.47□□□□□ -0.57
SP140-208ENST00000473711 SPTLC1O15269 473 aa11.47□□□□□ -0.57
SP140-208ENST00000473711 CXCL10P02778 98 aa11.47□□□□□ -0.57
SP140-208ENST00000473711 FGFR1P11362 822 aa11.47□□□□□ -0.57
SP140-208ENST00000473711 TNNT1P13805 278 aa11.47□□□□□ -0.57
SP140-208ENST00000473711 IGFBP6P24592 240 aaPredicted RBP11.47□□□□□ -0.57
SP140-208ENST00000473711 LRPAP1P30533 357 aa11.47□□□□□ -0.57
SP140-208ENST00000473711 SSTR3P32745 418 aaPredicted RBP11.47□□□□□ -0.57
SP140-208ENST00000473711 TAF6P49848 677 aa11.47□□□□□ -0.57
SP140-208ENST00000473711 ZNF132P52740 706 aa11.47□□□□□ -0.57
SP140-208ENST00000473711 FMO1Q01740 532 aa11.47□□□□□ -0.57
SP140-208ENST00000473711 CDR2Q01850 454 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms