RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 POLIQ9UNA4 740 aa19.54■□□□□ 0.72
SNX4-204ENST00000473417 MAPK8IP1Q9UQF2 711 aa19.54■□□□□ 0.72
SNX4-204ENST00000473417 PCDHA5Q9Y5H7 936 aa19.54■□□□□ 0.72
SNX4-204ENST00000473417 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.54■□□□□ 0.72
SNX4-204ENST00000473417 VPS13AQ96RL7 3174 aa19.53■□□□□ 0.72
SNX4-204ENST00000473417 H7C4K7 107 aa19.53■□□□□ 0.72
SNX4-204ENST00000473417 GALR2O43603 387 aaPredicted RBP19.53■□□□□ 0.72
SNX4-204ENST00000473417 EXTL3O43909 919 aa19.53■□□□□ 0.72
SNX4-204ENST00000473417 SMC2O95347 1197 aa19.53■□□□□ 0.72
SNX4-204ENST00000473417 LDHAP00338 332 aaKnown RBP19.53■□□□□ 0.72
SNX4-204ENST00000473417 ADRB2P07550 413 aa19.53■□□□□ 0.72
SNX4-204ENST00000473417 SRFP11831 508 aa19.53■□□□□ 0.72
SNX4-204ENST00000473417 NPR3P17342 541 aa19.53■□□□□ 0.72
SNX4-204ENST00000473417 HS2ST1Q7LGA3 356 aa19.53■□□□□ 0.72
SNX4-204ENST00000473417 CD302Q8IX05 232 aa19.53■□□□□ 0.72
SNX4-204ENST00000473417 GPD1LQ8N335 351 aa19.53■□□□□ 0.72
SNX4-204ENST00000473417 TMEM130Q8N3G9 435 aa19.53■□□□□ 0.72
SNX4-204ENST00000473417 SMARCE1Q969G3 411 aa19.53■□□□□ 0.72
SNX4-204ENST00000473417 GBP4Q96PP9 640 aa19.53■□□□□ 0.72
SNX4-204ENST00000473417 HCFC1R1Q9NWW0 138 aa19.53■□□□□ 0.72
SNX4-204ENST00000473417 HSPBP1Q9NZL4 362 aa19.53■□□□□ 0.72
SNX4-204ENST00000473417 DNMT3BQ9UBC3 853 aaKnown RBP19.53■□□□□ 0.72
SNX4-204ENST00000473417 WNT16Q9UBV4 365 aa19.53■□□□□ 0.72
SNX4-204ENST00000473417 FBXL5Q9UKA1 691 aa19.53■□□□□ 0.72
SNX4-204ENST00000473417 FBXL21Q9UKT6 434 aa19.53■□□□□ 0.72
SNX4-204ENST00000473417 CDH7Q9ULB5 785 aa19.53■□□□□ 0.72
SNX4-204ENST00000473417 UBQLN1Q9UMX0 589 aaKnown RBP19.53■□□□□ 0.72
SNX4-204ENST00000473417 NUMBLQ9Y6R0 609 aa19.53■□□□□ 0.72
SNX4-204ENST00000473417 ARHGEF37A1IGU5 675 aa19.52■□□□□ 0.72
SNX4-204ENST00000473417 KIAA0391O15091 583 aaKnown RBP19.52■□□□□ 0.72
SNX4-204ENST00000473417 CFHP08603 1231 aa19.52■□□□□ 0.72
SNX4-204ENST00000473417 NFICP08651 508 aa19.52■□□□□ 0.72
SNX4-204ENST00000473417 ATF2P15336 505 aa19.52■□□□□ 0.72
SNX4-204ENST00000473417 CYP3A5P20815 502 aa19.52■□□□□ 0.72
SNX4-204ENST00000473417 CYP2J2P51589 502 aa19.52■□□□□ 0.72
SNX4-204ENST00000473417 PABPC1LQ4VXU2 614 aaKnown RBP19.52■□□□□ 0.72
SNX4-204ENST00000473417 JADE1Q6IE81 842 aa19.52■□□□□ 0.72
SNX4-204ENST00000473417 ZNF280DQ6N043 979 aa19.52■□□□□ 0.72
SNX4-204ENST00000473417 ELOA2Q8IYF1 753 aaPredicted RBP19.52■□□□□ 0.72
SNX4-204ENST00000473417 SIX5Q8N196 739 aa19.52■□□□□ 0.72
SNX4-204ENST00000473417 FLCNQ8NFG4 579 aa19.52■□□□□ 0.72
SNX4-204ENST00000473417 ITFG1Q8TB96 612 aa19.52■□□□□ 0.72
SNX4-204ENST00000473417 FGF13Q92913 245 aa19.52■□□□□ 0.72
SNX4-204ENST00000473417 FGF14Q92915 247 aa19.52■□□□□ 0.72
SNX4-204ENST00000473417 GSDMAQ96QA5 445 aa19.52■□□□□ 0.72
SNX4-204ENST00000473417 RMND1Q9NWS8 449 aa19.52■□□□□ 0.72
SNX4-204ENST00000473417 PCDHB8Q9UN66 801 aa19.52■□□□□ 0.72
SNX4-204ENST00000473417 M0QZQ0 153 aa19.51■□□□□ 0.71
SNX4-204ENST00000473417 XPOTO43592 962 aaKnown RBP19.51■□□□□ 0.71
SNX4-204ENST00000473417 AOC1P19801 751 aa19.51■□□□□ 0.71
SNX4-204ENST00000473417 AARSP49588 968 aaKnown RBP eCLIP19.51■□□□□ 0.71
SNX4-204ENST00000473417 GUCY2FP51841 1108 aa19.51■□□□□ 0.71
SNX4-204ENST00000473417 WNT7BP56706 349 aa19.51■□□□□ 0.71
SNX4-204ENST00000473417 SNRPFP62306 86 aaKnown RBP19.51■□□□□ 0.71
SNX4-204ENST00000473417 POU5F1Q01860 360 aaKnown RBP19.51■□□□□ 0.71
SNX4-204ENST00000473417 CTXN3Q4LDR2 81 aa19.51■□□□□ 0.71
SNX4-204ENST00000473417 CBWD2Q8IUF1 395 aa19.51■□□□□ 0.71
SNX4-204ENST00000473417 BRSK2Q8IWQ3 736 aa19.51■□□□□ 0.71
SNX4-204ENST00000473417 TCEAL8Q8IYN2 117 aa19.51■□□□□ 0.71
SNX4-204ENST00000473417 SMYD4Q8IYR2 804 aaPredicted RBP19.51■□□□□ 0.71
SNX4-204ENST00000473417 RDH13Q8NBN7 331 aa19.51■□□□□ 0.71
SNX4-204ENST00000473417 APPL2Q8NEU8 664 aa19.51■□□□□ 0.71
SNX4-204ENST00000473417 TSPAN18Q96SJ8 248 aa19.51■□□□□ 0.71
SNX4-204ENST00000473417 ASB7Q9H672 318 aa19.51■□□□□ 0.71
SNX4-204ENST00000473417 RBAKQ9NYW8 714 aaPredicted RBP19.51■□□□□ 0.71
SNX4-204ENST00000473417 PATJQ8NI35 1801 aa19.51■□□□□ 0.71
SNX4-204ENST00000473417 DMDP11532 3685 aa19.5■□□□□ 0.71
SNX4-204ENST00000473417 KRBA1A5PL33 1030 aa19.5■□□□□ 0.71
SNX4-204ENST00000473417 KIF20AO95235 890 aa19.5■□□□□ 0.71
SNX4-204ENST00000473417 TMEM132DQ14C87 1099 aa19.5■□□□□ 0.71
SNX4-204ENST00000473417 TPGS2Q68CL5 300 aa19.5■□□□□ 0.71
SNX4-204ENST00000473417 ISM2Q6H9L7 571 aa19.5■□□□□ 0.71
SNX4-204ENST00000473417 PARM1Q6UWI2 310 aa19.5■□□□□ 0.71
SNX4-204ENST00000473417 MTSS1LQ765P7 747 aa19.5■□□□□ 0.71
SNX4-204ENST00000473417 NPAS3Q8IXF0 933 aa19.5■□□□□ 0.71
SNX4-204ENST00000473417 SPATA20Q8TB22 786 aa19.5■□□□□ 0.71
SNX4-204ENST00000473417 GPR152Q8TDT2 470 aa19.5■□□□□ 0.71
SNX4-204ENST00000473417 ATOH1Q92858 354 aaPredicted RBP19.5■□□□□ 0.71
SNX4-204ENST00000473417 KCTD10Q9H3F6 313 aa19.5■□□□□ 0.71
SNX4-204ENST00000473417 AVENQ9NQS1 362 aaPredicted RBP19.5■□□□□ 0.71
SNX4-204ENST00000473417 SLC2A4RGQ9NR83 387 aa19.5■□□□□ 0.71
SNX4-204ENST00000473417 LMBRD1Q9NUN5 540 aa19.5■□□□□ 0.71
SNX4-204ENST00000473417 CGNQ9P2M7 1197 aaKnown RBP19.5■□□□□ 0.71
SNX4-204ENST00000473417 COL4A2P08572 1712 aa19.5■□□□□ 0.71
SNX4-204ENST00000473417 COL4A3Q01955 1670 aa19.49■□□□□ 0.71
SNX4-204ENST00000473417 ZNF233A6NK53 670 aa19.49■□□□□ 0.71
SNX4-204ENST00000473417 PRRG1O14668 218 aa19.49■□□□□ 0.71
SNX4-204ENST00000473417 IL18RAPO95256 599 aa19.49■□□□□ 0.71
SNX4-204ENST00000473417 SEC24AO95486 1093 aa19.49■□□□□ 0.71
SNX4-204ENST00000473417 LRG1P02750 347 aa19.49■□□□□ 0.71
SNX4-204ENST00000473417 ELF1P32519 619 aa19.49■□□□□ 0.71
SNX4-204ENST00000473417 ARPP19P56211 112 aa19.49■□□□□ 0.71
SNX4-204ENST00000473417 CAMK4Q16566 473 aa19.49■□□□□ 0.71
SNX4-204ENST00000473417 SPATA1Q5VX52 437 aa19.49■□□□□ 0.71
SNX4-204ENST00000473417 C12orf56Q8IXR9 622 aa19.49■□□□□ 0.71
SNX4-204ENST00000473417 EFCAB13Q8IY85 973 aa19.49■□□□□ 0.71
SNX4-204ENST00000473417 GUF1Q8N442 669 aaKnown RBP19.49■□□□□ 0.71
SNX4-204ENST00000473417 XXYLT1Q8NBI6 393 aa19.49■□□□□ 0.71
SNX4-204ENST00000473417 ST13P5Q8NFI4 369 aaPredicted RBP19.49■□□□□ 0.71
SNX4-204ENST00000473417 BEST2Q8NFU1 509 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms