RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 ZNF513Q8N8E2 541 aaPredicted RBP10.72□□□□□ -0.69
APTX-216ENST00000472896 DAGLBQ8NCG7 672 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 NDNQ99608 321 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 PACSIN1Q9BY11 444 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 TLE6Q9H808 572 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 SEC63Q9UGP8 760 aaKnown RBP10.72□□□□□ -0.69
APTX-216ENST00000472896 ADAMTS1Q9UHI8 967 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 BLOC1S6Q9UL45 172 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 PCDHA4Q9UN74 947 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 GNEQ9Y223 722 aaKnown RBP10.72□□□□□ -0.69
APTX-216ENST00000472896 COL4A3BPQ9Y5P4 624 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 USH1CQ9Y6N9 552 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 COMMD3-BMI1R4GMX3 469 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 CCDC194A0A1B0GVG4 234 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 SOWAHBA6NEL2 793 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 SIGLEC16A6NMB1 481 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 F5H6K3 240 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 ATP2A1O14983 1001 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 KIAA0391O15091 583 aaKnown RBP10.72□□□□□ -0.69
APTX-216ENST00000472896 DYNC1LI2O43237 492 aaPredicted RBP10.72□□□□□ -0.69
APTX-216ENST00000472896 NDUFB10O96000 172 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 TPP2P29144 1249 aaPredicted RBP10.72□□□□□ -0.69
APTX-216ENST00000472896 PRKCIP41743 596 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 POLR2FP61218 127 aaKnown RBP10.72□□□□□ -0.69
APTX-216ENST00000472896 TROAPQ12815 778 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 ORC2Q13416 577 aaPredicted RBP10.72□□□□□ -0.69
APTX-216ENST00000472896 MYBPC3Q14896 1274 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 ZDHHC24Q6UX98 284 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 SV2BQ7L1I2 683 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 SPRED2Q7Z698 418 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 NT5DC3Q86UY8 548 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 VPS36Q86VN1 386 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 VSIG1Q86XK7 387 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 ENAHQ8N8S7 591 aaPredicted RBP10.72□□□□□ -0.69
APTX-216ENST00000472896 PPFIBP2Q8ND30 876 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 LRRC8CQ8TDW0 803 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 TRIM51Q9BSJ1 452 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 TUBB6Q9BUF5 446 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 CELF4Q9BZC1 486 aaKnown RBP10.72□□□□□ -0.69
APTX-216ENST00000472896 CARD9Q9H257 536 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 MMADHCQ9H3L0 296 aaPredicted RBP10.72□□□□□ -0.69
APTX-216ENST00000472896 METTL14Q9HCE5 456 aaKnown RBP10.72□□□□□ -0.69
APTX-216ENST00000472896 PDGFCQ9NRA1 345 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 STK17AQ9UEE5 414 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 GGT7Q9UJ14 662 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 STARD13Q9Y3M8 1113 aa10.72□□□□□ -0.69
APTX-216ENST00000472896 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.72□□□□□ -0.69
APTX-216ENST00000472896 MAP3K13O43283 966 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 RIPK2O43353 540 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 TJP3O95049 919 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 GGPS1O95749 300 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 H2AFZP0C0S5 128 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 SMPD1P17405 629 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 DESP17661 470 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 GSTT1P30711 240 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 FKBP3Q00688 224 aaKnown RBP10.71□□□□□ -0.69
APTX-216ENST00000472896 STRN3Q13033 797 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 FSCN1Q16658 493 aaKnown RBP10.71□□□□□ -0.69
APTX-216ENST00000472896 C1QTNF12Q5T7M4 302 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 PPP1R21Q6ZMI0 780 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 H2AFVQ71UI9 128 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 LONP2Q86WA8 852 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 ECHDC2Q86YB7 292 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 JAMLQ86YT9 394 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 ANKRD35Q8N283 1001 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 GATA6Q92908 595 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 CALML4Q96GE6 196 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 OLFM3Q96PB7 478 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 IWS1Q96ST2 819 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 DDX23Q9BUQ8 820 aaKnown RBP10.71□□□□□ -0.69
APTX-216ENST00000472896 SPZ1Q9BXG8 430 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 NENFQ9UMX5 172 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 COG5Q9UP83 839 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 TRIM33Q9UPN9 1127 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 ACTL7BQ9Y614 415 aa10.71□□□□□ -0.69
APTX-216ENST00000472896 A0A1B0GVG6 124 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 TMEM120BA0PK00 339 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 PP2D1A8MPX8 630 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 PI4K2BG5E9Z4 385 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 ZBED4O75132 1171 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 FAM163BP0C2L3 166 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 CCDC166P0CW27 439 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 CYP2C9P11712 490 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 CHRNA3P32297 505 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 STX2P32856 288 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 ABCD1P33897 745 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 PLTPP55058 493 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 TAP1Q03518 808 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 MAPK7Q13164 816 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 RCN2Q14257 317 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 CCDC6Q16204 474 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 ENOX2Q16206 610 aaKnown RBP10.7□□□□□ -0.7
APTX-216ENST00000472896 ALKBH5Q6P6C2 394 aaKnown RBP10.7□□□□□ -0.7
APTX-216ENST00000472896 CYFIP1Q7L576 1253 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 DEFB128Q7Z7B8 93 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 NELFCDQ8IXH7 590 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 FAM133AQ8N9E0 248 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 ARNTL2Q8WYA1 636 aa10.7□□□□□ -0.7
APTX-216ENST00000472896 ARHGEF2Q92974 986 aaKnown RBP10.7□□□□□ -0.7
APTX-216ENST00000472896 HLA-CQ95604 372 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms