RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 SCARA3Q6AZY7 606 aa11.27□□□□□ -0.6
UBE2F-220ENST00000472479 PHLDB3Q6NSJ2 640 aa11.27□□□□□ -0.6
UBE2F-220ENST00000472479 GJB7Q6PEY0 223 aa11.27□□□□□ -0.6
UBE2F-220ENST00000472479 DPH6Q7L8W6 267 aa11.27□□□□□ -0.6
UBE2F-220ENST00000472479 VSTM4Q8IW00 320 aa11.27□□□□□ -0.6
UBE2F-220ENST00000472479 ARHGEF19Q8IW93 802 aa11.27□□□□□ -0.6
UBE2F-220ENST00000472479 C3orf58Q8NDZ4 430 aa11.27□□□□□ -0.6
UBE2F-220ENST00000472479 SAMD11Q96NU1 681 aa11.27□□□□□ -0.6
UBE2F-220ENST00000472479 C17orf80Q9BSJ5 609 aa11.27□□□□□ -0.6
UBE2F-220ENST00000472479 PBX4Q9BYU1 374 aa11.27□□□□□ -0.6
UBE2F-220ENST00000472479 CYP3A43Q9HB55 503 aa11.27□□□□□ -0.6
UBE2F-220ENST00000472479 PLCB1Q9NQ66 1216 aa11.27□□□□□ -0.6
UBE2F-220ENST00000472479 ZNHIT6Q9NWK9 470 aaKnown RBP11.27□□□□□ -0.6
UBE2F-220ENST00000472479 A8MXQ7 604 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 TMEM189-UBE2V1I3L0A0 370 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 C2CD2LO14523 706 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 SPTLC1O15269 473 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 STAU1O95793 577 aaKnown RBP11.26□□□□□ -0.61
UBE2F-220ENST00000472479 PDGFRBP09619 1106 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 UCHL3P15374 230 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 RFX1P22670 979 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 STAT1P42224 750 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 ARPP19P56211 112 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 YWHAHQ04917 246 aaPredicted RBP11.26□□□□□ -0.61
UBE2F-220ENST00000472479 USP41Q3LFD5 358 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 ZNF394Q53GI3 561 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 WSCD1Q658N2 575 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 IQCEQ6IPM2 695 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 TMC7Q7Z402 723 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 ADGRF2Q8IZF7 708 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 SLC39A11Q8N1S5 342 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 TTC39CQ8N584 583 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 TOP6BLQ8N6T0 577 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 KLHL23Q8NBE8 558 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 FBXO22Q8NEZ5 403 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 LMO3Q8TAP4 145 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 ARNTL2Q8WYA1 636 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 TIFAQ96CG3 184 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 IQCDQ96DY2 449 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 SUSD3Q96L08 255 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 XYLT2Q9H1B5 865 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 PDCL3Q9H2J4 239 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 SMYD3Q9H7B4 428 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 VRTNQ9H8Y1 702 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 RC3H2Q9HBD1 1191 aaKnown RBP11.26□□□□□ -0.61
UBE2F-220ENST00000472479 APOBEC3GQ9HC16 384 aaKnown RBP11.26□□□□□ -0.61
UBE2F-220ENST00000472479 GDAP2Q9NXN4 497 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 STK39Q9UEW8 545 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 PCDHB8Q9UN66 801 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 COLQQ9Y215 455 aaPredicted RBP11.26□□□□□ -0.61
UBE2F-220ENST00000472479 SIK3Q9Y2K2 1263 aa11.26□□□□□ -0.61
UBE2F-220ENST00000472479 LUC7L2Q9Y383 392 aaKnown RBP11.26□□□□□ -0.61
UBE2F-220ENST00000472479 MKI67P46013 3256 aaKnown RBP11.26□□□□□ -0.61
UBE2F-220ENST00000472479 H7C4K7 107 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 SYN3O14994 580 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 ITGB1P05556 798 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 URODP06132 367 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 RB1P06400 928 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 CCDC172P0C7W6 258 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 IGFBP6P24592 240 aaPredicted RBP11.25□□□□□ -0.61
UBE2F-220ENST00000472479 DNAJB2P25686 324 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 LHX1P48742 406 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 ARID5AQ03989 594 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 GPM6BQ13491 265 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 DRAP1Q14919 205 aaPredicted RBP11.25□□□□□ -0.61
UBE2F-220ENST00000472479 OVOS1Q6IE37 1185 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 TMEM270Q6UE05 265 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.25□□□□□ -0.61
UBE2F-220ENST00000472479 VPS52Q8N1B4 723 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 TMEM86AQ8N2M4 240 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 CXorf38Q8TB03 319 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 RIN2Q8WYP3 895 aaPredicted RBP11.25□□□□□ -0.61
UBE2F-220ENST00000472479 CLP1Q92989 425 aaKnown RBP11.25□□□□□ -0.61
UBE2F-220ENST00000472479 FAXDC2Q96IV6 333 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 HEXIM2Q96MH2 286 aaKnown RBP11.25□□□□□ -0.61
UBE2F-220ENST00000472479 MRPL45Q9BRJ2 306 aaKnown RBP11.25□□□□□ -0.61
UBE2F-220ENST00000472479 TTPALQ9BTX7 342 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 C11orf84Q9BUA3 381 aaPredicted RBP11.25□□□□□ -0.61
UBE2F-220ENST00000472479 PLVAPQ9BX97 442 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 STK33Q9BYT3 514 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 GPR62Q9BZJ7 368 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 ALG13Q9NP73 1137 aaKnown RBP11.25□□□□□ -0.61
UBE2F-220ENST00000472479 ENTPD7Q9NQZ7 604 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 CISHQ9NSE2 258 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 MARCH5Q9NX47 278 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 DDX43Q9NXZ2 648 aaKnown RBP11.25□□□□□ -0.61
UBE2F-220ENST00000472479 CEP72Q9P209 647 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 L1RE1Q9UN81 338 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 SSX2IPQ9Y2D8 614 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 YBX2Q9Y2T7 364 aaKnown RBP11.25□□□□□ -0.61
UBE2F-220ENST00000472479 DAAM1Q9Y4D1 1078 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 FHOD1Q9Y613 1164 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 AKR1B15C9JRZ8 316 aaPredicted RBP11.25□□□□□ -0.61
UBE2F-220ENST00000472479 CXCL14O95715 111 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 CD19P15391 556 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 TKTP29401 623 aaKnown RBP11.25□□□□□ -0.61
UBE2F-220ENST00000472479 SMAD3P84022 425 aaKnown RBP11.25□□□□□ -0.61
UBE2F-220ENST00000472479 TSPY1Q01534 308 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 GCNT1Q02742 428 aa11.25□□□□□ -0.61
UBE2F-220ENST00000472479 SOWAHAQ2M3V2 549 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms