RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 ECEL1O95672 775 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 GGPS1O95749 300 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 CTSBP07858 339 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 SPATA31D3P0C874 917 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 DRD2P14416 443 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 BMP6P22004 513 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 MAP4P27816 1152 aaKnown RBP4.96□□□□□ -1.62
LMNB1-205ENST00000472034 SLC1A4P43007 532 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 CXCL12P48061 93 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 CLCN4P51793 760 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 RARSP54136 660 aaKnown RBP4.96□□□□□ -1.62
LMNB1-205ENST00000472034 MRPS6P82932 125 aaKnown RBP4.96□□□□□ -1.62
LMNB1-205ENST00000472034 KRT17Q04695 432 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 C4orf46Q504U0 113 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 CCDC158Q5M9N0 1113 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 NKAPLQ5M9Q1 402 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 CELF3Q5SZQ8 465 aaKnown RBP4.96□□□□□ -1.62
LMNB1-205ENST00000472034 HIST2H2BCQ6DN03 193 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 C15orf39Q6ZRI6 1047 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 Q6ZS52 159 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 BEND4Q6ZU67 534 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 SPATA31D4Q6ZUB0 917 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 PCGF5Q86SE9 256 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 FAM160B2Q86V87 743 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 LONP2Q86WA8 852 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 CREBRFQ8IUR6 639 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 FAM20CQ8IXL6 584 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 PNPLA1Q8N8W4 532 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 TMEM87AQ8NBN3 555 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 DNERQ8NFT8 737 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 CHURC1Q8WUH1 139 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 CASD1Q96PB1 797 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 MEIS3Q99687 375 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 TRIM4Q9C037 500 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 FAM49AQ9H0Q0 323 aaPredicted RBP4.96□□□□□ -1.62
LMNB1-205ENST00000472034 CCDC8Q9H0W5 538 aaPredicted RBP4.96□□□□□ -1.62
LMNB1-205ENST00000472034 MIR1-1HGQ9H1L0 117 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 LMAN1LQ9HAT1 526 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 SSU72Q9NP77 194 aaKnown RBP4.96□□□□□ -1.62
LMNB1-205ENST00000472034 MAN1C1Q9NR34 630 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 RBM12Q9NTZ6 932 aaKnown RBP4.96□□□□□ -1.62
LMNB1-205ENST00000472034 MTMR4Q9NYA4 1195 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 DONSONQ9NYP3 566 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 FLNCQ14315 2725 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 DOCK5Q9H7D0 1870 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 POLQO75417 2590 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 SPENQ96T58 3664 aaKnown RBP4.95□□□□□ -1.62
LMNB1-205ENST00000472034 ATG2BQ96BY7 2078 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 PNMA6EA0A0J9YXQ4 647 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 FAM95CA0A1B0GW59 222 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 C9IYK1 514 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 INPPL1O15357 1258 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 DYRK3O43781 588 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 MAFO75444 373 aaPredicted RBP4.95□□□□□ -1.62
LMNB1-205ENST00000472034 PAGE1O75459 146 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 SSBP05455 408 aaKnown RBP eCLIP4.95□□□□□ -1.62
LMNB1-205ENST00000472034 CNPP09543 421 aaKnown RBP4.95□□□□□ -1.62
LMNB1-205ENST00000472034 POU3F2P20265 443 aaPredicted RBP4.95□□□□□ -1.62
LMNB1-205ENST00000472034 UBA1P22314 1058 aaKnown RBP4.95□□□□□ -1.62
LMNB1-205ENST00000472034 LIG3P49916 1009 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 CCR3P51677 355 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 RIPPLY3P57055 190 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 NTHL1P78549 312 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 PAK2Q13177 524 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 MRPL58Q14197 206 aaKnown RBP4.95□□□□□ -1.62
LMNB1-205ENST00000472034 NFKBIBQ15653 356 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 MARCH8Q5T0T0 291 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 C1QTNF12Q5T7M4 302 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 SLC9C2Q5TAH2 1124 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 ICE2Q659A1 982 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 RSPO2Q6UXX9 243 aaPredicted RBP4.95□□□□□ -1.62
LMNB1-205ENST00000472034 ZNF852Q6ZMS4 543 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 HS2ST1Q7LGA3 356 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 CATIPQ7Z7H3 387 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 ARMC10Q8N2F6 343 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 C2CD4AQ8NCU7 369 aaPredicted RBP4.95□□□□□ -1.62
LMNB1-205ENST00000472034 GPBAR1Q8TDU6 330 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 SYTL5Q8TDW5 730 aaPredicted RBP4.95□□□□□ -1.62
LMNB1-205ENST00000472034 SMG7Q92540 1137 aaKnown RBP4.95□□□□□ -1.62
LMNB1-205ENST00000472034 ELMO3Q96BJ8 720 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 EVI5LQ96CN4 794 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 ZNF512BQ96KM6 892 aaPredicted RBP4.95□□□□□ -1.62
LMNB1-205ENST00000472034 IPO9Q96P70 1041 aaKnown RBP4.95□□□□□ -1.62
LMNB1-205ENST00000472034 ADAM2Q99965 735 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 FAM83CQ9BQN1 747 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 FTHL17Q9BXU8 183 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 PLA2G2FQ9BZM2 168 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 VPS45Q9NRW7 570 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 PCDHA4Q9UN74 947 aa4.95□□□□□ -1.62
LMNB1-205ENST00000472034 LRRK2Q5S007 2527 aa4.94□□□□□ -1.62
LMNB1-205ENST00000472034 ZMYM2Q9UBW7 1377 aa4.94□□□□□ -1.62
LMNB1-205ENST00000472034 SETD2Q9BYW2 2564 aaPredicted RBP4.94□□□□□ -1.62
LMNB1-205ENST00000472034 A0A087WV48 116 aa4.94□□□□□ -1.62
LMNB1-205ENST00000472034 CCDC194A0A1B0GVG4 234 aa4.94□□□□□ -1.62
LMNB1-205ENST00000472034 TULP2O00295 520 aa4.94□□□□□ -1.62
LMNB1-205ENST00000472034 NCAM2O15394 837 aa4.94□□□□□ -1.62
LMNB1-205ENST00000472034 IPO8O15397 1037 aaKnown RBP4.94□□□□□ -1.62
LMNB1-205ENST00000472034 ZNF862O60290 1169 aa4.94□□□□□ -1.62
LMNB1-205ENST00000472034 RNGTTO60942 597 aaKnown RBP4.94□□□□□ -1.62
LMNB1-205ENST00000472034 RAB11FIP3O75154 756 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms