RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 NXF1Q9UBU9 619 aaKnown RBP20.8■□□□□ 0.92
CHMP2B-204ENST00000472024 TBKBP1A7MCY6 615 aa20.79■□□□□ 0.92
CHMP2B-204ENST00000472024 M0QZQ0 153 aa20.79■□□□□ 0.92
CHMP2B-204ENST00000472024 ARHGAP6O43182 974 aa20.79■□□□□ 0.92
CHMP2B-204ENST00000472024 CILPO75339 1184 aa20.79■□□□□ 0.92
CHMP2B-204ENST00000472024 GFPT2O94808 682 aa20.79■□□□□ 0.92
CHMP2B-204ENST00000472024 SOWAHAQ2M3V2 549 aa20.79■□□□□ 0.92
CHMP2B-204ENST00000472024 OTOP2Q7RTS6 562 aa20.79■□□□□ 0.92
CHMP2B-204ENST00000472024 CCDC170Q8IYT3 715 aa20.79■□□□□ 0.92
CHMP2B-204ENST00000472024 SLC9A7Q96T83 725 aa20.79■□□□□ 0.92
CHMP2B-204ENST00000472024 SMYD3Q9H7B4 428 aa20.79■□□□□ 0.92
CHMP2B-204ENST00000472024 ZMYND8Q9ULU4 1186 aaPredicted RBP20.79■□□□□ 0.92
CHMP2B-204ENST00000472024 BARX2Q9UMQ3 279 aaPredicted RBP20.79■□□□□ 0.92
CHMP2B-204ENST00000472024 SNX9Q9Y5X1 595 aa20.79■□□□□ 0.92
CHMP2B-204ENST00000472024 NR2E3Q9Y5X4 410 aa20.79■□□□□ 0.92
CHMP2B-204ENST00000472024 NRDCO43847 1150 aa20.78■□□□□ 0.92
CHMP2B-204ENST00000472024 EFEMP2O95967 443 aa20.78■□□□□ 0.92
CHMP2B-204ENST00000472024 CYP11A1P05108 521 aa20.78■□□□□ 0.92
CHMP2B-204ENST00000472024 PNMA6AP0CW24 399 aaPredicted RBP20.78■□□□□ 0.92
CHMP2B-204ENST00000472024 SYN1P17600 705 aa20.78■□□□□ 0.92
CHMP2B-204ENST00000472024 IBSPP21815 317 aaPredicted RBP20.78■□□□□ 0.92
CHMP2B-204ENST00000472024 WARSP23381 471 aaKnown RBP20.78■□□□□ 0.92
CHMP2B-204ENST00000472024 BPIFB4P59827 614 aa20.78■□□□□ 0.92
CHMP2B-204ENST00000472024 UNC93AQ86WB7 457 aa20.78■□□□□ 0.92
CHMP2B-204ENST00000472024 WHAMMQ8TF30 809 aa20.78■□□□□ 0.92
CHMP2B-204ENST00000472024 DPF3Q92784 378 aa20.78■□□□□ 0.92
CHMP2B-204ENST00000472024 SUSD3Q96L08 255 aa20.78■□□□□ 0.92
CHMP2B-204ENST00000472024 FAM193BQ96PV7 902 aaPredicted RBP20.78■□□□□ 0.92
CHMP2B-204ENST00000472024 CHP1Q99653 195 aa20.78■□□□□ 0.92
CHMP2B-204ENST00000472024 LBHD1Q9BQE6 289 aaPredicted RBP20.78■□□□□ 0.92
CHMP2B-204ENST00000472024 CWH43Q9H720 699 aa20.78■□□□□ 0.92
CHMP2B-204ENST00000472024 ARHGEF37A1IGU5 675 aa20.77■□□□□ 0.92
CHMP2B-204ENST00000472024 GABRDO14764 452 aa20.77■□□□□ 0.92
CHMP2B-204ENST00000472024 KIF4AO95239 1232 aa20.77■□□□□ 0.92
CHMP2B-204ENST00000472024 GJB5O95377 273 aa20.77■□□□□ 0.92
CHMP2B-204ENST00000472024 PAEPP09466 180 aa20.77■□□□□ 0.92
CHMP2B-204ENST00000472024 WEE2P0C1S8 567 aa20.77■□□□□ 0.92
CHMP2B-204ENST00000472024 IGFBP6P24592 240 aaPredicted RBP20.77■□□□□ 0.92
CHMP2B-204ENST00000472024 RNASELQ05823 741 aaKnown RBP20.77■□□□□ 0.92
CHMP2B-204ENST00000472024 ZNF677Q86XU0 584 aa20.77■□□□□ 0.92
CHMP2B-204ENST00000472024 TMEM86AQ8N2M4 240 aa20.77■□□□□ 0.92
CHMP2B-204ENST00000472024 EPS8L1Q8TE68 723 aa20.77■□□□□ 0.92
CHMP2B-204ENST00000472024 KBTBD7Q8WVZ9 684 aa20.77■□□□□ 0.92
CHMP2B-204ENST00000472024 SENP8Q96LD8 212 aa20.77■□□□□ 0.92
CHMP2B-204ENST00000472024 CACNG4Q9UBN1 327 aa20.77■□□□□ 0.92
CHMP2B-204ENST00000472024 DNAJB4Q9UDY4 337 aa20.77■□□□□ 0.92
CHMP2B-204ENST00000472024 NOCTQ9UK39 431 aaKnown RBP20.77■□□□□ 0.92
CHMP2B-204ENST00000472024 NENFQ9UMX5 172 aa20.77■□□□□ 0.92
CHMP2B-204ENST00000472024 L1RE1Q9UN81 338 aa20.77■□□□□ 0.92
CHMP2B-204ENST00000472024 PCDHB4Q9Y5E5 795 aa20.77■□□□□ 0.92
CHMP2B-204ENST00000472024 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.77■□□□□ 0.92
CHMP2B-204ENST00000472024 CYP26A1O43174 497 aa20.76■□□□□ 0.91
CHMP2B-204ENST00000472024 B3GAT3O94766 335 aa20.76■□□□□ 0.91
CHMP2B-204ENST00000472024 LCA5LO95447 670 aa20.76■□□□□ 0.91
CHMP2B-204ENST00000472024 GALTP07902 379 aa20.76■□□□□ 0.91
CHMP2B-204ENST00000472024 SKILP12757 684 aa20.76■□□□□ 0.91
CHMP2B-204ENST00000472024 TYMPP19971 482 aa20.76■□□□□ 0.91
CHMP2B-204ENST00000472024 KLHL30Q0D2K2 578 aa20.76■□□□□ 0.91
CHMP2B-204ENST00000472024 TIGD5Q53EQ6 642 aa20.76■□□□□ 0.91
CHMP2B-204ENST00000472024 SCARA5Q6ZMJ2 495 aa20.76■□□□□ 0.91
CHMP2B-204ENST00000472024 RBBP8NLQ8NC74 664 aaPredicted RBP20.76■□□□□ 0.91
CHMP2B-204ENST00000472024 APPL2Q8NEU8 664 aa20.76■□□□□ 0.91
CHMP2B-204ENST00000472024 SP7Q8TDD2 431 aaPredicted RBP20.76■□□□□ 0.91
CHMP2B-204ENST00000472024 DDX1Q92499 740 aaKnown RBP20.76■□□□□ 0.91
CHMP2B-204ENST00000472024 MTIF3Q9H2K0 278 aaKnown RBP20.76■□□□□ 0.91
CHMP2B-204ENST00000472024 HAUS4Q9H6D7 363 aa20.76■□□□□ 0.91
CHMP2B-204ENST00000472024 MARCH5Q9NX47 278 aa20.76■□□□□ 0.91
CHMP2B-204ENST00000472024 CXXC1Q9P0U4 656 aaPredicted RBP20.76■□□□□ 0.91
CHMP2B-204ENST00000472024 CYB561D2O14569 222 aa20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 NRP1O14786 923 aa20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 HUS1O60921 280 aa20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 UPP2O95045 317 aa20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 ALDH2P05091 517 aa20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 CYP11B1P15538 503 aa20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 RAP1GAPP47736 663 aa20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 SLC11A1P49279 550 aa20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 RAD23BP54727 409 aa20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 CDH8P55286 799 aa20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 PTK2Q05397 1052 aa20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 TMEM270Q6UE05 265 aa20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 RAD9BQ6WBX8 426 aa20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 ZNF571Q7Z3V5 609 aaPredicted RBP20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 PDCL2Q8N4E4 241 aa20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 TRIM44Q96DX7 344 aaPredicted RBP20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 MRPL45Q9BRJ2 306 aaKnown RBP20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 COLEC11Q9BWP8 271 aa20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 NHEJ1Q9H9Q4 299 aaPredicted RBP20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 DSEQ9UL01 958 aa20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 KIAA1257Q9ULG3 409 aa20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 PCDHB8Q9UN66 801 aa20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 TSC2P49815 1807 aa20.75■□□□□ 0.91
CHMP2B-204ENST00000472024 SOWAHDA6NJG2 315 aa20.74■□□□□ 0.91
CHMP2B-204ENST00000472024 ITGB1P05556 798 aa20.74■□□□□ 0.91
CHMP2B-204ENST00000472024 PLEKP08567 350 aaPredicted RBP20.74■□□□□ 0.91
CHMP2B-204ENST00000472024 KRT5P13647 590 aa20.74■□□□□ 0.91
CHMP2B-204ENST00000472024 BMS1Q14692 1282 aaKnown RBP20.74■□□□□ 0.91
CHMP2B-204ENST00000472024 NOP9Q86U38 636 aaKnown RBP20.74■□□□□ 0.91
CHMP2B-204ENST00000472024 SLC47A2Q86VL8 602 aa20.74■□□□□ 0.91
CHMP2B-204ENST00000472024 CRYBG2Q8N1P7 616 aa20.74■□□□□ 0.91
CHMP2B-204ENST00000472024 SLC4A11Q8NBS3 891 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms