RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 RGS12O14924 1447 aa13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 NEDD4P46934 1319 aa13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 MYO3BQ8WXR4 1341 aa13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 AIM2O14862 343 aa13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 HUNKP57058 714 aa13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 RAD54LQ92698 747 aa13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 KLHL31Q9H511 634 aa13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 CEP72Q9P209 647 aa13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 ALOX15P16050 662 aaPredicted RBP13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 PTPN7P35236 360 aa13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 TP53BP2Q13625 1128 aa13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 ASB14A6NK59 587 aa13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 GPC1P35052 558 aa13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 GGCXP38435 758 aa13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 NPY2RP49146 381 aa13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 RPS7P62081 194 aaKnown RBP13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 SHCBP1LQ9BZQ2 653 aa13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 NOP53Q9NZM5 478 aaKnown RBP13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 LRRC14BA6NHZ5 514 aa13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 S100A5P33763 92 aa13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 MCCD1P59942 119 aaPredicted RBP13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 RAB14P61106 215 aa13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 HASPINQ8TF76 798 aa13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 CELF1Q92879 486 aaKnown RBP13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 XPO7Q9UIA9 1087 aaKnown RBP13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 COQ6Q9Y2Z9 468 aa13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 ZMYM4Q5VZL5 1548 aa13.84□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 CELF2O95319 508 aaKnown RBP13.83□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 CLUP10909 449 aa13.83□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 ATP12AP54707 1039 aa13.83□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 NLRP14Q86W24 1093 aa13.83□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 LRRC71Q8N4P6 559 aa13.83□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 SNF8Q96H20 258 aa13.83□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 TMEM169Q96HH4 297 aa13.83□□□□□ -0.19
NPHP3-ACAD11-201ENST00000471702 LRRIQ3A6PVS8 624 aaPredicted RBP13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CAND2O75155 1236 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PMPCBO75439 489 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PDGFRAP16234 1089 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 NMT1P30419 496 aaKnown RBP13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 THPOP40225 353 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ARHGAP15Q53QZ3 475 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 MS4A14Q96JA4 679 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 SLC4A9Q96Q91 983 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 MAP3K6O95382 1288 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 WEE2P0C1S8 567 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ERVK-10P10266 1014 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 YWHAQP27348 245 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 SERPINB4P48594 390 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ACTN3Q08043 901 aaPredicted RBP13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 GLRA4Q5JXX5 417 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 VSTM4Q8IW00 320 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 SPATA18Q8TC71 538 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 OXER1Q8TDS5 423 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 F8W810 466 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 FGFR1P11362 822 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 LDHDQ86WU2 507 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 SLITRK1Q96PX8 696 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ARF4P18085 180 aaPredicted RBP13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CLCN6P51797 869 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CAMK1Q14012 370 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 KATNAL1Q9BW62 490 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 MRPL1Q9BYD6 325 aaKnown RBP13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 SPON1Q9HCB6 807 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PCMTD2Q9NV79 361 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 TCP11X1B4DZS4 312 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PRMT3O60678 531 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ENO2P09104 434 aaPredicted RBP13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 RGS4P49798 205 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ANGEL2Q5VTE6 544 aaKnown RBP13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CYB5R4Q7L1T6 521 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 HAUS6Q7Z4H7 955 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 MTERF3Q96E29 417 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 INTS2Q9H0H0 1204 aaKnown RBP13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 SENP2Q9HC62 589 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PKD2L2Q9NZM6 624 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CRLS1Q9UJA2 301 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 FHOD1Q9Y613 1164 aa13.83□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 SSH2Q76I76 1423 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CCDC188H7C350 402 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ASS1P00966 412 aaKnown RBP13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ARL6IP4Q66PJ3 421 aaKnown RBP13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PANX2Q96RD6 677 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 DDX56Q9NY93 547 aaKnown RBP13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PSMC3P17980 439 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 AVPR1AP37288 418 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CENPSQ8N2Z9 138 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 OSBPL9Q96SU4 736 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PRMT1Q99873 361 aaKnown RBP13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 AMACRQ9UHK6 382 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 STON1Q9Y6Q2 735 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 TMEM191CA6NGB0 347 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 LARGE1O95461 756 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CLK1P49759 484 aaKnown RBP13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 RAD23BP54727 409 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 BAATQ14032 418 aaPredicted RBP13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PDCD10Q9BUL8 212 aa13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 EEF2KO00418 725 aaKnown RBP13.82□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CDC25BP30305 580 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms