RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 LY6KQ17RY6 165 aa9□□□□□ -0.97
CD47-204ENST00000471694 XRRA1Q6P2D8 792 aa9□□□□□ -0.97
CD47-204ENST00000471694 ZC3H18Q86VM9 953 aaKnown RBP9□□□□□ -0.97
CD47-204ENST00000471694 GPRASP2Q96D09 838 aa9□□□□□ -0.97
CD47-204ENST00000471694 FAR2Q96K12 515 aa9□□□□□ -0.97
CD47-204ENST00000471694 AIFM3Q96NN9 605 aa9□□□□□ -0.97
CD47-204ENST00000471694 PGLYRP2Q96PD5 576 aa9□□□□□ -0.97
CD47-204ENST00000471694 NDST4Q9H3R1 872 aa9□□□□□ -0.97
CD47-204ENST00000471694 WDCPQ9H6R7 721 aa9□□□□□ -0.97
CD47-204ENST00000471694 HSPBP1Q9NZL4 362 aa9□□□□□ -0.97
CD47-204ENST00000471694 POLLQ9UGP5 575 aa9□□□□□ -0.97
CD47-204ENST00000471694 LNPEPQ9UIQ6 1025 aa9□□□□□ -0.97
CD47-204ENST00000471694 PGRMC1O00264 195 aaKnown RBP9□□□□□ -0.97
CD47-204ENST00000471694 C16orf86Q6ZW13 317 aa9□□□□□ -0.97
CD47-204ENST00000471694 ACAD11Q709F0 780 aa9□□□□□ -0.97
CD47-204ENST00000471694 ZNF34Q8IZ26 560 aa9□□□□□ -0.97
CD47-204ENST00000471694 GLMNQ92990 594 aa9□□□□□ -0.97
CD47-204ENST00000471694 CEP19Q96LK0 163 aa9□□□□□ -0.97
CD47-204ENST00000471694 POLR3CQ9BUI4 534 aaPredicted RBP9□□□□□ -0.97
CD47-204ENST00000471694 PCDHB5Q9Y5E4 795 aa9□□□□□ -0.97
CD47-204ENST00000471694 FHOD1Q9Y613 1164 aa9□□□□□ -0.97
CD47-204ENST00000471694 RPTORQ8N122 1335 aa9□□□□□ -0.97
CD47-204ENST00000471694 OPHN1O60890 802 aa9□□□□□ -0.97
CD47-204ENST00000471694 SLFN14P0C7P3 912 aa9□□□□□ -0.97
CD47-204ENST00000471694 CHRM3P20309 590 aa9□□□□□ -0.97
CD47-204ENST00000471694 EIF4A3P38919 411 aaKnown RBP9□□□□□ -0.97
CD47-204ENST00000471694 ADCYAP1R1P41586 468 aa9□□□□□ -0.97
CD47-204ENST00000471694 HDLBPQ00341 1268 aaKnown RBP9□□□□□ -0.97
CD47-204ENST00000471694 PPIL2Q13356 520 aa9□□□□□ -0.97
CD47-204ENST00000471694 KYNUQ16719 465 aa9□□□□□ -0.97
CD47-204ENST00000471694 EPHA10Q5JZY3 1008 aa9□□□□□ -0.97
CD47-204ENST00000471694 FAM47EQ6ZV65 393 aa9□□□□□ -0.97
CD47-204ENST00000471694 SMPD4Q9NXE4 827 aa9□□□□□ -0.97
CD47-204ENST00000471694 A0A087WZ62 844 aa9□□□□□ -0.97
CD47-204ENST00000471694 MEFVO15553 781 aaPredicted RBP9□□□□□ -0.97
CD47-204ENST00000471694 MTA2O94776 668 aa9□□□□□ -0.97
CD47-204ENST00000471694 NMT1P30419 496 aaKnown RBP9□□□□□ -0.97
CD47-204ENST00000471694 NCKAP1LP55160 1127 aa9□□□□□ -0.97
CD47-204ENST00000471694 ADCK5Q3MIX3 580 aa9□□□□□ -0.97
CD47-204ENST00000471694 CXorf38Q8TB03 319 aa9□□□□□ -0.97
CD47-204ENST00000471694 ZNF564Q8TBZ8 553 aaPredicted RBP9□□□□□ -0.97
CD47-204ENST00000471694 PBKQ96KB5 322 aa9□□□□□ -0.97
CD47-204ENST00000471694 TMEM161AQ9NX61 479 aa9□□□□□ -0.97
CD47-204ENST00000471694 ARHGEF38Q9NXL2 777 aa9□□□□□ -0.97
CD47-204ENST00000471694 SPASTQ9UBP0 616 aa9□□□□□ -0.97
CD47-204ENST00000471694 KCNN4O15554 427 aa9□□□□□ -0.97
CD47-204ENST00000471694 GAS2O43903 313 aaKnown RBP9□□□□□ -0.97
CD47-204ENST00000471694 NTSR2O95665 410 aa9□□□□□ -0.97
CD47-204ENST00000471694 EEF1B2P24534 225 aaKnown RBP9□□□□□ -0.97
CD47-204ENST00000471694 NPY2RP49146 381 aa9□□□□□ -0.97
CD47-204ENST00000471694 RHOAP61586 193 aa9□□□□□ -0.97
CD47-204ENST00000471694 RBL2Q08999 1139 aa9□□□□□ -0.97
CD47-204ENST00000471694 WHAMMP3Q1A5X7 153 aa9□□□□□ -0.97
CD47-204ENST00000471694 TTC31Q49AM3 519 aaPredicted RBP9□□□□□ -0.97
CD47-204ENST00000471694 PRAMEF19Q5SWL8 479 aa9□□□□□ -0.97
CD47-204ENST00000471694 ZNF697Q5TEC3 545 aa9□□□□□ -0.97
CD47-204ENST00000471694 MTSS1LQ765P7 747 aa9□□□□□ -0.97
CD47-204ENST00000471694 SPIRE2Q8WWL2 714 aa9□□□□□ -0.97
CD47-204ENST00000471694 ABHD16BQ9H3Z7 469 aa9□□□□□ -0.97
CD47-204ENST00000471694 EML4Q9HC35 981 aaKnown RBP9□□□□□ -0.97
CD47-204ENST00000471694 HDAC6Q9UBN7 1215 aa9□□□□□ -0.97
CD47-204ENST00000471694 TNFSF13BQ9Y275 285 aa9□□□□□ -0.97
CD47-204ENST00000471694 TRAV19A0A0A6YYK7 116 aa9□□□□□ -0.97
CD47-204ENST00000471694 HALP42357 657 aa9□□□□□ -0.97
CD47-204ENST00000471694 EFHC1Q5JVL4 640 aa9□□□□□ -0.97
CD47-204ENST00000471694 FLCNQ8NFG4 579 aa9□□□□□ -0.97
CD47-204ENST00000471694 OSCP1Q8WVF1 389 aa9□□□□□ -0.97
CD47-204ENST00000471694 RPRD1BQ9NQG5 326 aaKnown RBP9□□□□□ -0.97
CD47-204ENST00000471694 TDRKHQ9Y2W6 561 aaKnown RBP9□□□□□ -0.97
CD47-204ENST00000471694 AP3B1O00203 1094 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 CXCL14O95715 111 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 PGK1P00558 417 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 SOX10P56693 466 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 TGM3Q08188 693 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 ZNF746Q6NUN9 644 aaPredicted RBP8.99□□□□□ -0.97
CD47-204ENST00000471694 IPMKQ8NFU5 416 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 RUBCNLQ9H714 662 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 ASAH2Q9NR71 780 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 CNTNAP2Q9UHC6 1331 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 ALKQ9UM73 1620 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 RASSF9O75901 435 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 MLNP12872 115 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 MAP3K7CLP57077 242 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 MUM1Q2TAK8 710 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 SGO1Q5FBB7 561 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 MMGT1Q8N4V1 131 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 NAF1Q96HR8 494 aaKnown RBP8.99□□□□□ -0.97
CD47-204ENST00000471694 CLMNQ96JQ2 1002 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 VPS33BQ9H267 617 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 TTC7AQ9ULT0 858 aaPredicted RBP8.99□□□□□ -0.97
CD47-204ENST00000471694 ATP8A1Q9Y2Q0 1164 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 CCDC195A0A1B0GUA6 201 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 COPEO14579 308 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 GSPT1P15170 499 aaKnown RBP8.99□□□□□ -0.97
CD47-204ENST00000471694 PDGFRAP16234 1089 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 FOXO4P98177 505 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 FAM124AQ86V42 546 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 PPP1R2P1Q96PQ5 205 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 PLEKHF1Q96S99 279 aa8.99□□□□□ -0.97
CD47-204ENST00000471694 NHEJ1Q9H9Q4 299 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms