RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 IP6K2Q9UHH9 426 aa19.77■□□□□ 0.76
COL20A1-205ENST00000471582 INO80B-WBP1J3KQ70 363 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 TLR3O15455 904 aaKnown RBP19.76■□□□□ 0.75
COL20A1-205ENST00000471582 CDH5P33151 784 aaPredicted RBP19.76■□□□□ 0.75
COL20A1-205ENST00000471582 TFAMQ00059 246 aaKnown RBP19.76■□□□□ 0.75
COL20A1-205ENST00000471582 ARHGAP1Q07960 439 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 FAM187BQ17R55 369 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 KCTD19Q17RG1 926 aaPredicted RBP19.76■□□□□ 0.75
COL20A1-205ENST00000471582 ZNF699Q32M78 642 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 HOOK3Q86VS8 718 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 TMEM35BQ8NCS4 154 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 TRAPPC12Q8WVT3 735 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 FAM212AQ96EL1 285 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 INO80BQ9C086 356 aaPredicted RBP19.76■□□□□ 0.75
COL20A1-205ENST00000471582 XYLT2Q9H1B5 865 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 PDGFCQ9NRA1 345 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 WHRNQ9P202 907 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 PCDHGC3Q9UN70 934 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 ANK1P16157 1881 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 PHKA2P46019 1235 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 ATP1A2P50993 1020 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 IFFO1Q0D2I5 559 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 KLF1Q13351 362 aaPredicted RBP19.76■□□□□ 0.75
COL20A1-205ENST00000471582 PDCLQ13371 301 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 PPP1R7Q15435 360 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 ZNF792Q3KQV3 632 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 SCARA3Q6AZY7 606 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 PHLDB2Q86SQ0 1253 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 CROCCP2Q86T23 111 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 IFNLR1Q8IU57 520 aaPredicted RBP19.76■□□□□ 0.75
COL20A1-205ENST00000471582 EXD1Q8NHP7 514 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 CDT1Q9H211 546 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 VTA1Q9NP79 307 aa19.76■□□□□ 0.75
COL20A1-205ENST00000471582 EIF4BP23588 611 aaKnown RBP19.75■□□□□ 0.75
COL20A1-205ENST00000471582 ASPAP45381 313 aa19.75■□□□□ 0.75
COL20A1-205ENST00000471582 CLCN3P51790 818 aa19.75■□□□□ 0.75
COL20A1-205ENST00000471582 TAP1Q03518 808 aa19.75■□□□□ 0.75
COL20A1-205ENST00000471582 CALCOCO2Q13137 446 aa19.75■□□□□ 0.75
COL20A1-205ENST00000471582 KRT71Q3SY84 523 aa19.75■□□□□ 0.75
COL20A1-205ENST00000471582 DENND2CQ68D51 928 aa19.75■□□□□ 0.75
COL20A1-205ENST00000471582 FOXR1Q6PIV2 292 aa19.75■□□□□ 0.75
COL20A1-205ENST00000471582 ZNF467Q7Z7K2 595 aaPredicted RBP19.75■□□□□ 0.75
COL20A1-205ENST00000471582 THNSL1Q8IYQ7 743 aa19.75■□□□□ 0.75
COL20A1-205ENST00000471582 EMID1Q96A84 441 aaPredicted RBP19.75■□□□□ 0.75
COL20A1-205ENST00000471582 DCLK3Q9C098 648 aa19.75■□□□□ 0.75
COL20A1-205ENST00000471582 CENPHQ9H3R5 247 aa19.75■□□□□ 0.75
COL20A1-205ENST00000471582 PTPN22Q9Y2R2 807 aa19.75■□□□□ 0.75
COL20A1-205ENST00000471582 COL1A2P08123 1366 aa19.75■□□□□ 0.75
COL20A1-205ENST00000471582 TCRBV5S1A1TA0A578 114 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 RBM47A0AV96 593 aaKnown RBP19.74■□□□□ 0.75
COL20A1-205ENST00000471582 TMEM191CA6NGB0 347 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 MAGEB2O15479 319 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 B4GALT5O43286 388 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 MDH1P40925 334 aaKnown RBP19.74■□□□□ 0.75
COL20A1-205ENST00000471582 KCNJ1P48048 391 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 KRT17Q04695 432 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 PTK6Q13882 451 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 EEF1DP3Q658K8 133 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 RASAL3Q86YV0 1011 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 BCAS4Q8TDM0 211 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 C1orf54Q8WWF1 131 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 PTPN18Q99952 460 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 RNPEPQ9H4A4 650 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 GAS8O95995 478 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 GH1P01241 217 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 LGALS2P05162 132 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 GJB1P08034 283 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 RARGP13631 454 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 CD58P19256 250 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 LSP1P33241 339 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 ZNF157P51786 506 aaPredicted RBP19.74■□□□□ 0.75
COL20A1-205ENST00000471582 TMEM132AQ24JP5 1023 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 TMEM63BQ5T3F8 832 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 LRRC38Q5VT99 294 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 TAPT1Q6NXT6 567 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 SAPCD2Q86UD0 394 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 LINC01465Q8N7H1 131 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 PPTC7Q8NI37 304 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 MINDY3Q9H8M7 445 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 RPF1Q9H9Y2 349 aaKnown RBP19.74■□□□□ 0.75
COL20A1-205ENST00000471582 GPBP1L1Q9HC44 474 aaPredicted RBP19.74■□□□□ 0.75
COL20A1-205ENST00000471582 CEP83Q9Y592 693 aa19.74■□□□□ 0.75
COL20A1-205ENST00000471582 MCF2P10911 925 aa19.73■□□□□ 0.75
COL20A1-205ENST00000471582 ITIH2P19823 946 aa19.73■□□□□ 0.75
COL20A1-205ENST00000471582 BRD2P25440 801 aaKnown RBP19.73■□□□□ 0.75
COL20A1-205ENST00000471582 TAS2R40P59535 323 aa19.73■□□□□ 0.75
COL20A1-205ENST00000471582 TNFAIP2Q03169 654 aa19.73■□□□□ 0.75
COL20A1-205ENST00000471582 FAM110CQ1W6H9 321 aa19.73■□□□□ 0.75
COL20A1-205ENST00000471582 ATL2Q8NHH9 583 aa19.73■□□□□ 0.75
COL20A1-205ENST00000471582 PGM2Q96G03 612 aa19.73■□□□□ 0.75
COL20A1-205ENST00000471582 HERPUD2Q9BSE4 406 aa19.73■□□□□ 0.75
COL20A1-205ENST00000471582 TMEM109Q9BVC6 243 aa19.73■□□□□ 0.75
COL20A1-205ENST00000471582 TSPYL1Q9H0U9 437 aa19.73■□□□□ 0.75
COL20A1-205ENST00000471582 IFT122Q9HBG6 1241 aa19.73■□□□□ 0.75
COL20A1-205ENST00000471582 CHST7Q9NS84 486 aa19.73■□□□□ 0.75
COL20A1-205ENST00000471582 SLC12A6Q9UHW9 1150 aa19.73■□□□□ 0.75
COL20A1-205ENST00000471582 RALAP11233 206 aa19.72■□□□□ 0.75
COL20A1-205ENST00000471582 INSRRP14616 1297 aa19.72■□□□□ 0.75
COL20A1-205ENST00000471582 SSTR3P32745 418 aaPredicted RBP19.72■□□□□ 0.75
COL20A1-205ENST00000471582 CETN2P41208 172 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms